BAC Information

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BAC

Clone NameB6Ng01-327E24
Chromosome11 (Build37)
Map Location 36,252,912 - 36,408,480
singlet/doubletdoublet
Overlap geneOdz2
Upstream geneSlit3, Pank3, LOC666733, AI595406, Rars, Wwc1, LOC636532
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-327E24.bB6Ng01-327E24.g
ACCGA114892GA114893
length481706
definitionB6Ng01-327E24.b B6Ng01-327E24.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(36,252,912 - 36,253,398)(36,407,749 - 36,408,480)
sequence
attgagttagacttgggtatcccaggttggggactttcttctggtcctaa
gcatccaggaagagagcacagaatgtgaaggctggatgagaactgctacc
ttttaccgtggatgagtctcaataccaagcccatgctctcctccccatca
atatttcatgttctcagagtcataagaaaacacatctgttgccttcctgc
atcgtaatgtgtgggatggagcaaagattattacagagcaggttcgggaa
tttaaaaattcatcaccttctcaatttagaaagctggtatgtggttagga
ctcatgaaggctcaacaagcttgaaatgaccaaggggccaggccttgttc
ctgagaaatctgtgatgtgcgggaaatcagatgcagtgagaggtgggagg
tggtcagcagaccgaggcggaaggtgaaggccacaagtccctggtgtact
ctacacagaaggtttgctgtggtgtgtgtgt

gaattcaatatgacgtccttgtaggtgcatattgggggtcctttatttat
gcaaaataatacatgtgctctcatccttgtgttctttgccatgataaatt
aagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaa
gaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagggagg
aaggaaggaagaaaagaaatttcatcactttctctcgttattaaattgag
tattaatgtccagaagttatgtacattattattttcagaagatatgcttc
tgagccatgcagatggctaagtggataaagtgtctactggagaagcagga
agacctgagtttgatacccagcacatatttgagaagctgggtgtggctgc
acatgtctataacctcaatgctgtgggagcagaggaaggtggctcgctag
agttcattgaccaactgttctacccacttagtaaggcttaagttcagcaa
caacctatctcaacaagttggagactatcaacacacactagtattgactc
ctagcatatgcacacatgtacatatacaaccaaaccacataacatgttca
cacaacacacacacatcaattacattgtataatgtacctgagatagataa
caatcaattcaataataacaataattacagtacactaccttgtatgttct
tggctt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_36252912_36253398
seq2: B6Ng01-327E24.b_45_531

seq1  GAATTCATTGAGTTAGACTTGGGTATCCCAGGTTGGGGACTTTCTTCTGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTGAGTTAGACTTGGGTATCCCAGGTTGGGGACTTTCTTCTGG  50

seq1  TCCTAAGCATCCAGGAAGAGAGCACAGAATGTGAAGGCTGGATGAGAACT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTAAGCATCCAGGAAGAGAGCACAGAATGTGAAGGCTGGATGAGAACT  100

seq1  GCTACCTTTTACCGTGGATGAGTCTCAATACCAAGCCCATGCTCTCCTCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTACCTTTTACCGTGGATGAGTCTCAATACCAAGCCCATGCTCTCCTCC  150

seq1  CCATCAATATTTCATGTTCTCAGAGTCATAAGAAAACACATCTGTTGCCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCAATATTTCATGTTCTCAGAGTCATAAGAAAACACATCTGTTGCCT  200

seq1  TCCTGCATCGTAATGTGTGGGATGGAGCAAAGATTATTACAGAGCAGGTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGCATCGTAATGTGTGGGATGGAGCAAAGATTATTACAGAGCAGGTT  250

seq1  CGGGAATTTAAAAATTCATCACCTTCTCAATTTAGAAAGCTGGTATGTGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGGAATTTAAAAATTCATCACCTTCTCAATTTAGAAAGCTGGTATGTGG  300

seq1  TTAGGACTCATGAAGGCTCAACAAGCTTGAAATGACCAAGGGGCCAGGCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGACTCATGAAGGCTCAACAAGCTTGAAATGACCAAGGGGCCAGGCC  350

seq1  TTGTTCCTGAGAAATCTGTGATGTGCGGGAAATCAGATGCAGTGAGAGGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTCCTGAGAAATCTGTGATGTGCGGGAAATCAGATGCAGTGAGAGGT  400

seq1  GGGAGGTGGTCAGCAGACCGAGGCGGAAGGTGAAGGCCACAAGTCCCTGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGGTGGTCAGCAGACCGAGGCGGAAGGTGAAGGCCACAAGTCCCTGG  450

seq1  TGTACTCTACACAGAAGGTTTGCTGTGGTGTGTGTGT  487
      |||||||||||||||||||||||||||||||||||||
seq2  TGTACTCTACACAGAAGGTTTGCTGTGGTGTGTGTGT  487


seq1: chr11_36407749_36408480
seq2: B6Ng01-327E24.g_66_771 (reverse)

seq1  AAGCCAAAGAAAACATACAAGGTAGTGTACTGTAATTTATTGTTATTATT  50
      ||||||   | |||||||||||||||||||||||| ||||||||||||||
seq2  AAGCCA---AGAACATACAAGGTAGTGTACTGTAA-TTATTGTTATTATT  46

seq1  GAATTGATTGTTATCTATCTCAGGTACATTTATACAAAATGTAATTGATT  100
      |||||||||||||||||||||||||||| ||||||  |||||||||||  
seq2  GAATTGATTGTTATCTATCTCAGGTACA-TTATAC--AATGTAATTGA--  91

seq1  TGTGTGTGTGTTGTGTGAACATGTTTATGTGGGTTTGGTTGGTATATGTA  150
      ||||||||||||||||||||||| |||||| ||||||||| |||||||||
seq2  TGTGTGTGTGTTGTGTGAACATG-TTATGT-GGTTTGGTT-GTATATGTA  138

seq1  CATGTGTGCATATGCTTAGGAGTCAATACTAAGTGTGTTGTTTGATAGTT  200
      ||||||||||||||| |||||||||||||| |||||||   ||||||| |
seq2  CATGTGTGCATATGC-TAGGAGTCAATACT-AGTGTGT--GTTGATAG-T  183

seq1  CTCCAACTTTTGTTTGAGATAGGTTTGTTTGCTGAACTTAAGCCTTACTA  250
      |||||||||    ||||||||||||   ||||||||||||||||||||||
seq2  CTCCAACTT---GTTGAGATAGGTT--GTTGCTGAACTTAAGCCTTACTA  228

seq1  AGTGGGTAGAACAGTTGGTCAATGAACTCTAGCGAGCCACCTTCCTCTGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGGTAGAACAGTTGGTCAATGAACTCTAGCGAGCCACCTTCCTCTGC  278

seq1  TCCCACAGCATTGAGGTTATAGACATGTGCAGCCACACCCAGCTTCTCAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCACAGCATTGAGGTTATAGACATGTGCAGCCACACCCAGCTTCTCAA  328

seq1  ATATGTGCTGGGTATCAAACTCAGGTCTTCCTGCTTCTCCAGTAGACACT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGTGCTGGGTATCAAACTCAGGTCTTCCTGCTTCTCCAGTAGACACT  378

seq1  TTATCCACTTAGCCATCTGCATGGCTCAGAAGCATATCTTCTGAAAATAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCCACTTAGCCATCTGCATGGCTCAGAAGCATATCTTCTGAAAATAA  428

seq1  TAATGTACATAACTTCTGGACATTAATACTCAATTTAATAACGAGAGAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGTACATAACTTCTGGACATTAATACTCAATTTAATAACGAGAGAAA  478

seq1  GTGATGAAATTTCTTTTCTTCCTTCCTTCCTCCCTTTCTTTCTTTCTTTC  550
      |||||||||||||||||||||||||||||||||    |||||||||||||
seq2  GTGATGAAATTTCTTTTCTTCCTTCCTTCCTCC----CTTTCTTTCTTTC  524

seq1  TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT  574

seq1  TCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTAATTTATCATGGCAAAGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTAATTTATCATGGCAAAGA  624

seq1  ACACAAGGATGAGAGCACATGTATTATTTTGCATAAATAAAGGACCCCCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAAGGATGAGAGCACATGTATTATTTTGCATAAATAAAGGACCCCCA  674

seq1  ATATGCACCTACAAGGACGTCATATTGAATTC  732
      ||||||||||||||||||||||||||||||||
seq2  ATATGCACCTACAAGGACGTCATATTGAATTC  706


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