BAC Information

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BAC

Clone NameB6Ng01-327H20
Chromosome11 (Build37)
Map Location 43,375,757 - 43,376,828
singlet/doubletsinglet
Overlap geneCcnjl
Upstream geneGabrb2, Atp10b, EG544767, Pttg1, Slu7, LOC100039392, C1qtnf2
Downstream geneFabp6, LOC620562, 4631424J17Rik, Ttc1, Adra1b, Il12b, Ublcp1, 3732413I11Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-327H20.bB6Ng01-327H20.g
ACCGA115023GA115024
length1,076159
definitionB6Ng01-327H20.b B6Ng01-327H20.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcagatgtgtgcgaatgcacacgtgaacacgtgcacacacgcacac
tgtcagaacttgaccctaacaggcaggaggaccattatcccactaccccc
acctcccatggctttccagacctgaggtggtcagccaggggccggatgga
cttctagctcgcaggaaaccactcggcaatgagcactgttttcccaggga
gggtgtgggatcctggaagtggccatgaaaggcaacagaaatctgtgtag
acaaagcccgtggggttgaaagagggggaagaacggagaaggctcgtgag
agggagcctggctttgtgtttactggggtttaagaggatatgacaatcta
tagcttgtcttccggccaggaaatgagtttctctcttcccttcagttatg
aagacacaccaagtcagaaagaatataatccactttgtgggcatgaactc
tgagtacaggaggacattaacattttgtggttggtacttctgtagcatag
atataatttttaaaagtgttactgtagatgcatactcacgtttgttcatg
atgtttatgcaagccatggggtgcatggaaggctcaggacagtttggtgg
agcagtttatctacattatagtttgaggtttatggactcaggtcactgac
ttcaagttgcaagcacctttacccacagagctgtctcagcagccattagt
tttcttttttaatcatttttttaaataatagaaacacctttcttttaaaa
aaaaaatgccattaggccttacatccaaggccatgggatctgatacaaag
ggcactctggcttctctggctttctgaccgaagccactctctctgtccag
ggctaaaggactcagcagtctaagtttacttttgagcgtcagctcctggt
gtcttcagggtctccagaggactcaacgcagccttaactcatgacctgga
aagggctcccactgagacgtgtgcctggagttgtcacagcagcctcagaa
aagtgaaagccaccaaagggtctgtgggcagaggactggtcattcacagt
ggacatgaactgagtcagcaggagat
tggggacttggacttagagggtaaataaatgctagagccccaagaagtgg
ggtgggttgttagttgttgggggttgttgtacattgctgggggttcatgt
ataaatgcaatcatatgcaaacatcaataaatatttttattaaaatatgg
atatatagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_43375757_43376828
seq2: B6Ng01-327H20.b_47_1122 (reverse)

seq1  ATCTCCTGCTGACTCAGTTCATGTCCACTGTGAATGACCAGTCCTCTGCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCCTGCTGACTCAGTTCATGTCCACTGTGAATGACCAGTCCTCTGCC  50

seq1  CACAGACCC-TTGGTGGCTTTCACTTTTCTGAGGCTGCTGTGAACACT-C  98
      ||||||||| |||||||||||||||||||||||||||||||||  ||| |
seq2  CACAGACCCTTTGGTGGCTTTCACTTTTCTGAGGCTGCTGTGACAACTCC  100

seq1  AGGCACACGTCTCAGTGGGAGCCCTTTCCAGGTCATGAGTTAAGGCTGCG  148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCACACGTCTCAGTGGGAGCCCTTTCCAGGTCATGAGTTAAGGCTGCG  150

seq1  TTGAGTCCTCTGGAGACCCTGAAGACACCAGGAGCTGACGCTCAAAAGT-  197
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  TTGAGTCCTCTGGAGACCCTGAAGACACCAGGAGCTGACGCTCAAAAGTA  200

seq1  AACTTAGACTGCTGAGTCC-TTAGCCCTGGACAGAGAGAGTGGCTTCGGT  246
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  AACTTAGACTGCTGAGTCCTTTAGCCCTGGACAGAGAGAGTGGCTTCGGT  250

seq1  CAGAAAGCCAGAGAAGCCAGAGTGCCCTTTGTATCAGATCCCATGGCCTT  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAAGCCAGAGAAGCCAGAGTGCCCTTTGTATCAGATCCCATGGCCTT  300

seq1  GGATGTAAGGCCTAATGGCATTTTTTTTTTAAAAGAAAGGTGTTTCTATT  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGTAAGGCCTAATGGCATTTTTTTTTTAAAAGAAAGGTGTTTCTATT  350

seq1  ATTTAAAAAAATGATTAAAAAAGAAAACTAATGGCTGCTGAGACAGCTCT  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAAAAAAATGATTAAAAAAGAAAACTAATGGCTGCTGAGACAGCTCT  400

seq1  GTGGGTAAAGGTGCTTGCAACTTGAAGTCAGTGACCTGAGTCCATAAACC  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGTAAAGGTGCTTGCAACTTGAAGTCAGTGACCTGAGTCCATAAACC  450

seq1  TCAAACTATAATGTAGATAAACTGCTCCACCAAACTGTCCTGAGCCTTCC  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAACTATAATGTAGATAAACTGCTCCACCAAACTGTCCTGAGCCTTCC  500

seq1  ATGCACCCCATGGCTTGCATAAACATCATGAACAAACGTGAGTATGCATC  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCACCCCATGGCTTGCATAAACATCATGAACAAACGTGAGTATGCATC  550

seq1  TACAGTAACACTTTTAAAAATTATATCTATGCTACAGAAGTACCAACCAC  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGTAACACTTTTAAAAATTATATCTATGCTACAGAAGTACCAACCAC  600

seq1  AAAATGTTAATGTCCTCCTGTACTCAGAGTTCATGCCCACAAAGTGGATT  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATGTTAATGTCCTCCTGTACTCAGAGTTCATGCCCACAAAGTGGATT  650

seq1  ATATTCTTTCTGACTTGGTGTGTCTTCATAACTGAAGGGAAGAGAGAAAC  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTCTTTCTGACTTGGTGTGTCTTCATAACTGAAGGGAAGAGAGAAAC  700

seq1  TCATTTCCTGGCCGGAAGACAAGCTATAGATTGTCATATCCTCTTAAACC  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTTCCTGGCCGGAAGACAAGCTATAGATTGTCATATCCTCTTAAACC  750

seq1  CCAGTAAACACAAAGCCAGGCTCCCTCTCACGAGCCTTCTCCGTTCTTCC  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTAAACACAAAGCCAGGCTCCCTCTCACGAGCCTTCTCCGTTCTTCC  800

seq1  CCCTCTTTCAACCCCACGGGCTTTGTCTACACAGATTTCTGTTGCCTTTC  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCTTTCAACCCCACGGGCTTTGTCTACACAGATTTCTGTTGCCTTTC  850

seq1  ATGGCCACTTCCAGGATCCCACACCCTCCCTGGGAAAACAGTGCTCATTG  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCCACTTCCAGGATCCCACACCCTCCCTGGGAAAACAGTGCTCATTG  900

seq1  CCGAGTGGTTTCCTGCGAGCTAGAAGTCCATCCGGCCCCTGGCTGACCAC  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGAGTGGTTTCCTGCGAGCTAGAAGTCCATCCGGCCCCTGGCTGACCAC  950

seq1  CTCAGGTCTGGAAAGCCATGGGAGGTGGGGGTAGTGGGATAATGGTCCTC  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGGTCTGGAAAGCCATGGGAGGTGGGGGTAGTGGGATAATGGTCCTC  1000

seq1  CTGCCTGTTAGGGTCAAGTTCTGACAGTGTGCGTGTGTGCACGTGTTCAC  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCTGTTAGGGTCAAGTTCTGACAGTGTGCGTGTGTGCACGTGTTCAC  1050

seq1  GTGTGCATTCGCACACATCTGAATTC  1072
      ||||||||||||||||||||||||||
seq2  GTGTGCATTCGCACACATCTGAATTC  1076