BAC Information

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BAC

Clone NameB6Ng01-328L18
Chromosome11 (Build37)
Map Location 105,136,372 - 105,137,506
singlet/doubletsinglet
Overlap geneTlk2
Upstream geneMapt, 1700081L11Rik, Cdc27, Myl4, LOC666721, EG629959, Itgb3, LOC666739, LOC629960, LOC666749, LOC632784, LOC276809, LOC100041125, 4921510J17Rik, Mettl2, LOC666771, 1700052K11Rik
Downstream geneMrc2, Rnf190, EG666807, Tanc2, LOC667737, Cyb561, Ace, EG217246, Kcnh6, Wdr68, Ccdc44, Map3k3, Limd2, 2610019A05Rik, 2610204L23Rik, Ddx42, Ftsj3, Psmc5, Smarcd2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-328L18.bB6Ng01-328L18.g
ACCGA115911GA115912
length6721,125
definitionB6Ng01-328L18.b B6Ng01-328L18.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctataaacattaagtctacattaaccatttgatatattatcagga
tggcaaaagtggtttttttttcctctgcagattctcatctgtctgtccct
gtctctctctctctctctctctctctctctctctctctctctctctctct
ctctctctctctcacttacgcgcaccccaactcccccccccccaaaaaaa
cctcccccccccccttttccctcttctctcaacgccgagatgagtgtatg
tatatatagatgtgctctatatagagatttttgtcggttgtgtgggcaaa
cagactctcacacagtctgactctcactcagggggttcttctttagctca
gaagggttgaaaaatatatcaaaatataaaaagcacttttgaaaaattga
gtgaacaacacaacatattttggtgtgcctcgccccactataaattaact
agtagatatatctatggcgggggagagacacacacaaacacgcttgatac
acgggcgcaatttttcatagcggaatatatataaaaagattgtggggaaa
aacatcttcctttgagatatatattataataaaaaaaattctttaatcac
agtgaaagaacgattaatgattcgttcatacatttacgtgccctgatgag
tgcgtagatgtaaaaatggcga
gaattcacatcagaattaaaacatgtcttatatttgagattgcaacatgc
atgtctctgatggcttgggagaattcagtaggtgctcttcagcctggaat
ttgtaggtatacacaaagcatttactgagaagtctgtattttctttaaac
cactactttcaggattccaatgattaactgcaaagaagaatcccagtgag
gtggtgggtatggccccaggctgctccactgccttcttcctcaccttcct
cccataaagacactggtagaagatcacacccactgaccaaacatcgactt
tatttgagatctttggtggctctttcccaaccacaaaacactctggtggt
aaatacctaggagaaaacagaaataaaacactcagaaaattaaatatata
aatccaagctgtatacaaaaaggcaaataaagggttaaaaactgagcact
cagcactgaggaacaggggcaaaggggggtgaaactgtgaatagcgacaa
tcagaacaatcagagttaaggagaaagaccttgcctcacaataaacaaac
aaacattttatataaaatgtgcacacgcgcacccacacccacacaccctt
atacccaacacttaagactcaactatcaggttagaaatatatacaagggg
gctggtgagatggctcagtgggtaagaacacccaactgctcttccgaagg
tccagagttcaaatcccagcaaccacatggtggctcacaaccatccctaa
tgaaatctgacgccctcttctggagtgtctgaagacagctacagtgtact
tacatataataaataaataaatctaaaaaaaaaaaaaaaaagaaatatat
acaagtaaatgaaaggctctcattcgaactgacataggtggcaatatctt
catgtggcatcacaatttatcatttctcaatatgtagagaagtaaatgtt
cttctctagtttcactttgatcacccccactacctccttttcccaggttg
tgtctactccagtgtcattcacagttttgtcatggtagtattcttactga
tgtgatactaggatcaacccaggtctcaagtgtgaagtgtccatccatgg
aataatcagcccaaataattttttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_105136372_105137506
seq2: B6Ng01-328L18.g_69_1193 (reverse)

seq1  AAAAAAATATATTTGGGCTGAATATATCCATGGTAGAACACTTCCACACT  50
      |||||||| |||||||||||| ||| |||||||  | |||||| ||||||
seq2  AAAAAAAT-TATTTGGGCTGATTAT-TCCATGGATGGACACTT-CACACT  47

seq1  TGAGACCCTGGGTGTGATCCTAGTTATCACCATCAGTAAAGAATACTACC  100
      ||||| ||||||| ||||||||| ||||| ||||||| ||||||||||||
seq2  TGAGA-CCTGGGT-TGATCCTAG-TATCA-CATCAGT-AAGAATACTACC  92

seq1  AATGACAAAACTTGTGAATGACACTTGGAGTAGACACAACCCTGGGAAAG  150
       |||||||||| |||||||||||| ||||||||||||||||  || ||||
seq2  -ATGACAAAAC-TGTGAATGACAC-TGGAGTAGACACAACCTGGGAAAAG  139

seq1  GAGGTAGTGGGGGGTGATCAAAGTGAAACTAGAG-AGAACATTTACCTCT  199
      |||||||| ||||||||||||||||||||||||| ||||||||||| |||
seq2  GAGGTAGT-GGGGGTGATCAAAGTGAAACTAGAGAAGAACATTTACTTCT  188

seq1  CTACATATTGAGAAATGATAAATTGTGATGCCACATGAAGATATTGCCAC  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACATATTGAGAAATGATAAATTGTGATGCCACATGAAGATATTGCCAC  238

seq1  CTATGTCAGTTCGAATGAGAGCCTTTCATTTACTTGTATATATTTC-TTT  298
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  CTATGTCAGTTCGAATGAGAGCCTTTCATTTACTTGTATATATTTCTTTT  288

seq1  TTTTTTTTTTTTTAGATTTATTTATTTATTATATGTAAGTACACTGTAGC  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTTTTTTAGATTTATTTATTTATTATATGTAAGTACACTGTAGC  338

seq1  TGTCTTCAGACACTCCAGAAGAGGGCGTCAGATTTCATTAGGGATGGTTG  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTTCAGACACTCCAGAAGAGGGCGTCAGATTTCATTAGGGATGGTTG  388

seq1  TGAGCCACCATGTGGTTGCTGGGATTTGAACTCTGGACCTTCGGAAGAGC  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCCACCATGTGGTTGCTGGGATTTGAACTCTGGACCTTCGGAAGAGC  438

seq1  AGTTGGGTGTTCTTACCCACTGAGCCATCTCACCAGCCCCCTTGTATATA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGGGTGTTCTTACCCACTGAGCCATCTCACCAGCCCCCTTGTATATA  488

seq1  TTTCTAACCTGATAGTTGAGTCTTAAGTGTTGGGTATAAGGGTGTGTGGG  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTAACCTGATAGTTGAGTCTTAAGTGTTGGGTATAAGGGTGTGTGGG  538

seq1  TGTGGGTGCGCGTGTGCACATTTTATATAAAATGTTTGTTTGTTTATTGT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGGTGCGCGTGTGCACATTTTATATAAAATGTTTGTTTGTTTATTGT  588

seq1  GAGGCAAGGTCTTTCTCCTTAACTCTGATTGTTCTGATTGTCGCTATTCA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCAAGGTCTTTCTCCTTAACTCTGATTGTTCTGATTGTCGCTATTCA  638

seq1  CAGTTTCACCCCCCTTTGCCCCTGTTCCTCAGTGCTGAGTGCTCAGTTTT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTTCACCCCCCTTTGCCCCTGTTCCTCAGTGCTGAGTGCTCAGTTTT  688

seq1  TAACCCTTTATTTGCCTTTTTGTATACAGCTTGGATTTATATATTTAATT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACCCTTTATTTGCCTTTTTGTATACAGCTTGGATTTATATATTTAATT  738

seq1  TTCTGAGTGTTTTATTTCTGTTTTCTCCTAGGTATTTACCACCAGAGTGT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGAGTGTTTTATTTCTGTTTTCTCCTAGGTATTTACCACCAGAGTGT  788

seq1  TTTGTGGTTGGGAAAGAGCCACCAAAGATCTCAAATAAAGTCGATGTTTG  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTGGTTGGGAAAGAGCCACCAAAGATCTCAAATAAAGTCGATGTTTG  838

seq1  GTCAGTGGGTGTGATCTTCTACCAGTGTCTTTATGGGAGGAAGGTGAGGA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGTGGGTGTGATCTTCTACCAGTGTCTTTATGGGAGGAAGGTGAGGA  888

seq1  AGAAGGCAGTGGAGCAGCCTGGGGCCATACCCACCACCTCACTGGGATTC  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGGCAGTGGAGCAGCCTGGGGCCATACCCACCACCTCACTGGGATTC  938

seq1  TTCTTTGCAGTTAATCATTGGAATCCTGAAAGTAGTGGTTTAAAGAAAAT  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTGCAGTTAATCATTGGAATCCTGAAAGTAGTGGTTTAAAGAAAAT  988

seq1  ACAGACTTCTCAGTAAATGCTTTGTGTATACCTACAAATTCCAGGCTGAA  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGACTTCTCAGTAAATGCTTTGTGTATACCTACAAATTCCAGGCTGAA  1038

seq1  GAGCACCTACTGAATTCTCCCAAGCCATCAGAGACATGCATGTTGCAATC  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCACCTACTGAATTCTCCCAAGCCATCAGAGACATGCATGTTGCAATC  1088

seq1  TCAAATATAAGACATGTTTTAATTCTGATGTGAATTC  1135
      |||||||||||||||||||||||||||||||||||||
seq2  TCAAATATAAGACATGTTTTAATTCTGATGTGAATTC  1125