MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-329J11
Chromosome	11 (Build37)
Map Location	18,290,549 - 18,463,661
singlet/doublet	doublet
Overlap gene	LOC665796
Upstream gene	EG665748, Etaa1, LOC327871, LOC627696, LOC627716
Downstream gene	Meis1, LOC635455
Link	Open Mouse BAC browser

Click to get alignment info.

name	EG665748 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:665748 MGI:3645846
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 18 Proteins

name	Etaa1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:68145 MGI:1915395
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC327871 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:327871
definition	note : glyceraldehyde-3-phosphate dehydrogenase pseudogene pseudo : _no_value

name	LOC627696 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:627696
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 10 Proteins pseudo : _no_value

name	LOC627716 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:627716
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	LOC665796 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:665796
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	Meis1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:17268 MGI:104717
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC635455 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:635455
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 36 ESTs, 2 Proteins pseudo : _no_value

name	EG665748 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149261620 GeneID:665748 MGI:3645846
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 18 Proteins product : predicted gene, EG665748 transcript_id : XM_979177.2

name	Etaa1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142384332 GeneID:68145 MGI:1915395
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Ewing's tumor-associated antigen 1 transcript_id : NM_026576.2

name	Meis1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130144 GeneID:17268 MGI:104717
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : myeloid ecotropic viral integration site 1 transcript_id : NM_010789.2

name	EG665748 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149261621 GeneID:665748 MGI:3645846
definition	codon_start : 1 product : hypothetical protein protein_id : XP_984271.2

name	Etaa1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:23956180 CCDS:CCDS24452.1 GeneID:68145 MGI:1915395
definition	codon_start : 1 exception : mismatches in translation product : ETAA16 protein protein_id : NP_080852.1

name	Meis1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6754676 CCDS:CCDS24453.1 GeneID:17268 MGI:104717
definition	GO_component : GO:0005634 - nucleus [Evidence IDA]; GO:0005667 - transcription factor complex [Evidence IDA] GO_function : GO:0003677 - DNA binding [Evidence IDA]; GO:0005515 - protein binding [Evidence IPI]; GO:0003705 - RNA polymerase II transcription factor activity, enhancer binding [Evidence IDA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA] GO_process : GO:0007275 - development [Evidence IEA]; GO:0045449 - regulation of transcription [Evidence IEA]; GO:0006357 - regulation of transcription from RNA polymerase II promoter [Evidence IC]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IDA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 product : myeloid ecotropic viral integration site 1 protein_id : NP_034919.1

name	LOC627696 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:627696
definition	number : 1 pseudo : _no_value

name	LOC627716 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:627716
definition	number : 2 pseudo : _no_value

name	LOC627716 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:627716
definition	number : 1 pseudo : _no_value

name	LOC665796 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:665796
definition	number : 4 pseudo : _no_value

name	LOC665796 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:665796
definition	number : 3 pseudo : _no_value

name	LOC665796 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:665796
definition	number : 2 pseudo : _no_value

name	LOC665796 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:665796
definition	number : 1 pseudo : _no_value

name	LOC635455 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149261622 GeneID:635455
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 36 ESTs, 2 Proteins product : hypothetical LOC635455 pseudo : _no_value transcript_id : XR_033115.1

clone name	MSMg01-263A20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-430C21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-491C10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-052E23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-545E17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-123J04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-366H13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-160J02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-161N12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-110J23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-383J13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-467H11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-206B09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-072I07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-413E20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-157A04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-477I04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-417N09
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-369M16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-208G24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-218D18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-208P07
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-415I21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-492G21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-382H12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-423E08
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-280K18
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-273K11
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-543F15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-183K22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-075K10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-080A24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-357I12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-547N04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-474O04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-105B04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-513P12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-308A04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-364M11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-485K09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-531C18
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-159M01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-381H17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-064G11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-068I16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-342I21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-163I08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-209M10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-456A07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-481O18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-181F08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-346H24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-420K13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-370C09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-213J04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-410G13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-102C19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-397M10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-434B12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-394I12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-299P15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-353H08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-073E15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-391D15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-150A15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-483M07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-334E15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-525A24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-482A23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-546I14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-535B08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-418B09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-148F20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-347G12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-361F22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-064G19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-534A12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-149F01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-422N13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-085K11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-262B05
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-479C11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-361I17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-437A23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-148M15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-478M02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-156D18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-350H11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-545I13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-471H22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-444P02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-311J14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-342B03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-088H02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-086I10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-086I11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-112G02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-292G24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-308K14
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-184G24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-272C09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-325B18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-464N01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-337A17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-540C05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-390L18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-391E15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-209D12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-377L15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-046G13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-504J07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-436G11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-351I24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-460H17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-450L24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-053L09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-156B22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-313D01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-027J21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-218M14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-198O06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-323G16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-005N18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-028O13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-005G22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-062K23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-281O16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-332C08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-009E18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-075E10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-182D21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-059O20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-011A09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-159O23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-289C13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-177L12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-058K15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-033D18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-077O13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-303I17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-236G07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-339P01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-129B08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-146L02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-344C04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-229H11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-171P13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-193N15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-208D19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-329J11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-188D12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-031M17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-222I05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-252D23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-183K05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-326P22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-068E16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-217O09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-343B22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-185P09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-162H20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-126I05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-053E01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-138B03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-215C05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-224N07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-142M12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-072F21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-294H24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-044P13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-035I03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-080H17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-108D15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-063A08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-265K11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-234E14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-290K23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-255J18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-088B04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-128J18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-287C01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-318D20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-339G23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-102H24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-239J11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-323O05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-183D17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-157L11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-199K09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-252P16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-099B07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-116K24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-158I20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-019D08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-204C07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-333M16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-217O16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-294L11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-311D23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-195H18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-045G06
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-329J11.b	B6Ng01-329J11.g
ACC	GA116513	GA116514
length	1,109	527
definition	B6Ng01-329J11.b	B6Ng01-329J11.g
singlet/doublet	doublet	doublet
BLAST hit	unique	unique
Map location.	(18,462,538 - 18,463,661)	(18,290,549 - 18,291,088)
sequence	gaattcattgttttctttctggtgttataaagctacatgccacctaggcc atgcctctgcacaagctaagtagcccaaagaacaaatatgcaattctaca actcgatgtgtcaagtacccaattgtttcttgtttgggcagcaagagaac atatttagatttgaagtcgtcatctatagtccactaaattcatgatcttc atgttttgattatgtattctcttcactgtgatagcctggatgcaatggat gacactacaaagaaacctgaatttattgagtagatcaacagctgcctttg atatagtgcttcctctaggtcagattttgtgtgattggcaggatgccgtg acagcttggctcatattgtacattctgaagaggaacatgggtagaagtgg tcaattagaactgccactcagccattccttacagtagctgctggtggcct gccactttcactatgcactagctgttaagatgggggaaatcctgcttacc catgtctgtgggttaagtggggatgattctgggaaaatcctaattacata gacaccgatctaatattatggcatggtaaagatgaggtgaatatcatttg ggggatggaatcagccaccctccagtataggtacaggataattaatttga gtgggatatttcctcccaattatatttataacaccaaggcatgtctattt atgccctccctaatggtttcctctaggaacaaaatctttcctgatgtcca ctatgtatgaacactctctaagcatgcactagtacagctatgtttgtgat tttcctctgttcttcttcttccttttttgattcctcatcttgccttgtat gtctgctgtaatgttgtaagtgaaaacacaagatatgtacagtacaatgt gaaagattaacagatgagaaaatgaagttttattagagttatcctgaaga aatgtcttcgtcctaaaggattagacagatgaagtcagatttctttgagt gtttgagactaaacaattggaaaatatattgacaagagataacagatgaa agaggagaagaagtggtcagcaattaaaaatactatcattcctctgaggc ttggttctg	gaattcctccaaatagctgagtagctgagtaacaaaatctgtgaacactt catttgttatgttgtgagccaaacatactctgtgcaagtttaatgtgtaa gtctctctctctctctctctctctctctctctctctctctctctctctct ctctctctctgtgtgtgtgtgtgtgtgtgtgtagcttgttgtggggagta gtcattaaaaaaaaaatagctttactctttaaactagttatcctcatcta ttttcgctcttcttttttgaaattgcattttgactctcaatattttatga ggccgcaaggccgtttttgacttttttttttagtgagtctttggaaattt tttccttacactttagactaatcattggttatgagaattccatgtgcatt cctttgtaccacgaattccgaagtaagatccagaaatgaacatttgtgag acgggggggggagagagacagacacagacatgactccacttcgactatgt ctagagagggaacaagtaatatactta
quality values	Open. Hide. 46 31 34 33 62 38 22 47 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 47 56 62 62 62 62 59 59 59 46 62 46 62 62 62 59 59 62 62 59 62 62 62 62 59 59 62 62 62 62 54 54 62 62 54 62 62 62 62 62 62 59 62 62 62 59 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 59 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 59 59 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 62 62 62 62 56 62 62 62 62 62 62 56 62 62 62 62 62 62 62 62 62 52 62 62 62 43 62 62 62 62 62 62 62 62 52 62 62 62 62 62 62 62 52 43 62 62 46 62 62 62 62 62 62 52 58 58 58 52 58 54 58 41 58 58 58 58 58 45 41 58 54 38 58 52 58 58 58 58 58 58 58 52 52 49 58 58 52 54 54 58 46 58 42 58 54 52 58 54 46 54 58 54 58 54 54 58 52 58 54 52 47 58 54 54 58 58 52 52 58 58 58 54 58 58 58 52 46 26 58 58 35 54 42 58 58 54 46 49 47 51 52 53 58 58 54 58 58 58 58 41 25 54 58 51 50 46 52 39 50 53 58 34 53 58 58 47 53 53 46 50 53 39 39 52 39 58 50 37 52 50 49 58 37 46 46 50 50 51 31 41 39 58 58 50 51 35 50 54 58 54 30 25 39 39 58 48 40 50 51 37 41 44 31 50 50 58 46 51 47 39 58 37 49 51 49 49 50 50 43 41 30 52 39 58 40 53 41 58 40 44 39 54 51 58 46 50 39 46 42 58 58 50 50 58 58 41 36 33 39 58 43 24 38 36 49 54 45 47 35 39 41 45 53 49 41 37 54 54 34 33 51 30 38 26 31 50 42 54 47 40 51 40 38 44 22 35 42 52 52 54 45 51 41 41 53 35 37 32 34 46 54 51 54 46 54 52 26 47 40 53 54 31 22 44 45 53 33 53 30 47 37 42 53 47 34 32 53 39 53 51 35 26 32 53 28 53 52 31 36 49 41 52 31 52 31 30 53 31 42 53 32 27 47 21 32 30 31 29 51 51 51 51 43 31 43 32 31 31 51 36 30 34 31 31 28 34 22 17 51 13 28 46 32 38 30 38 25 31 31 31 29 31 46 25 33 31 27 44 15 42 46 29 31 35 35 41 31 31 46 42 42 30 24 43 18 29 19 31 25 34 36 41 31 31 32 32 30 31 31 31 19 28 36 41 27 18 13 20 28 32 38 21 31 25 32 34 24 32 37 17 17 29 16 36 48 44 24 17 29 21 29 10 30 44 44 31 20 22 33 38 33 42 27 27 21 11 29 26 30 31 31 23 25 7 28 37 31 23 28 25 34 21 29 32 10 25 22 17 32 26 33 25 12 17 23 21 30 32 10 16 11 6 8 10 5 16 15 30 27 33 24 13 11 32 14 48 32 23 16 29 23 11 20 7 11 20 9 32 11 7 9 5 22 9 17 16 34 11 8 15 19 8 13 11 19 9 32 34 12 13 30 6 6 5 7 18 13 5 3 5 5 5 8 27 7 10 14 30 14 13 13 5 7 23 29 10 5 19 7 11 9 8 9 25 6 7 24 9 20 22 19 5 11 21 10 19 9 6 15 19 9 20 28 25 21 7 8 9 9 6 15 22 12 14 9 13 7 10 5 18 6 7 8 6 3 4 4 8 8 2 3 8 4 4	Open. Hide. 62 59 43 49 62 62 62 62 62 59 18 62 56 59 49 48 56 56 49 42 46 59 62 62 62 62 62 59 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 59 62 62 59 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 54 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 54 54 54 62 62 54 54 54 54 62 62 54 42 62 62 62 54 62 62 62 54 54 54 54 42 42 42 42 54 56 54 46 54 46 54 46 40 28 31 35 35 39 43 43 36 34 30 28 34 34 24 34 21 34 30 34 34 27 28 34 27 34 27 31 29 31 23 23 34 28 36 34 33 24 24 26 18 12 10 13 8 18 12 12 10 11 18 9 20 12 13 11 18 11 10 9 12 10 10 8 10 10 9 11 11 10 9 10 10 10 8 8 10 9 13 12 9 5 8 10 13 12 10 10 22 8 18 7 10 10 10 8 10 9 13 12 13 12 10 9 23 6 13 9 21 11 7 8 8 24 11 13 13 12 30 15 13 13 13 11 8 13 11 11 12 13 10 20 23 8 10 13 10 8 10 10 21 11 17 14 10 28 21 8 11 12 9 7 12 13 13 13 10 5 8 21 8 10 10 5 11 10 5 10 5 8 8 13 13 8 13 11 23 8 10 13 19 10 10 13 13 16 15 12 9 21 13 12 24 21 19 11 13 11 13 10 12 16 10 11 9 13 11 12 12 10 9 10 11 10 13 13 17 10 14 15 22 10 10 10 10 8 11 11 11 17 19 11 13 10 17 13 13 9 11 10 10 10 14 11 10 13 10 13 10 16 14 14 17 12 11 13 30 18 13 22 19 10 13 11 18 13 8 8 11 26 11 13 18 19 10 13 10 10 10 12 10 8 17 8 12 12 11 11 16 11 7 7 8 16 8 11 10 16 8 11 8 8 13 16 13 10 10 10 8 7 8 10 13 17 16 11 17 13 10 13 17 16 10 10 13 11 11 10 6 8 12 13 13 13 14 18 16 18 13 13 12 12 11 11 10 10 10 10 12 12 11 13 8 11 10 15 25 15 22 30 18 30 27 10 18 18 16 13 23 18 10 13 9 10 10 11 23 17 11 10 8 11 13 11 10

Alignment Information

BAC End 1

BAC End 2

seq1: chr11_18462538_18463661
seq2: B6Ng01-329J11.b_45_1153 (reverse)

seq1  CAGAACCCAGGCCCTCTAGAGGAATGGATAGTATTTTTAATTGCTGACCC  50
      ||||||| ||  |||| |||||||| ||||||||||||||||||||| ||
seq2  CAGAACCAAG--CCTC-AGAGGAAT-GATAGTATTTTTAATTGCTGA-CC  45

seq1  ACTTCTTTCTCCTCTTTCTTCTTGTTATTCTCTTTGTCATATTATTTTCC  100
      ||||| |||||||||||| || ||||| |||| ||||||   ||||||||
seq2  ACTTC-TTCTCCTCTTTCATC-TGTTA-TCTC-TTGTCAATATATTTTCC  91

seq1  AATTTGTTTAGTTCTCAAACCACTTCAAAGAAATCTGACTTCCTCTGTCT  150
      || |||||||| ||||||| ||| |||||||||||||||||| |||||||
seq2  AA-TTGTTTAG-TCTCAAA-CAC-TCAAAGAAATCTGACTTCATCTGTCT  137

seq1  AATCCTTTAGGACGAAGACATTTTCTTCAGGATAACTCTAATAAAACTTC  200
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  AATCCTTTAGGACGAAGACA-TTTCTTCAGGATAACTCTAATAAAACTTC  186

seq1  ATTTTTCTCATCTGTTAATCTTTCACATTGTACTGTACATATCTTGTGTT  250
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  A-TTTTCTCATCTGTTAATCTTTCACATTGTACTGTACATATCTTGTGTT  235

seq1  TTCACTTACAACATTACAGCAGACATACAAGGCAAGATGAGGAATCAAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACTTACAACATTACAGCAGACATACAAGGCAAGATGAGGAATCAAAA  285

seq1  AAGGAAGAAGAAGAACAGAGGAAAATCACAAACATAGCTGTACTAGTGCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAAGAAGAAGAACAGAGGAAAATCACAAACATAGCTGTACTAGTGCA  335

seq1  TGCTTAGAGAGTGTTCATACATAGTGGACATCAGGAAAGATTTTGTTCCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTAGAGAGTGTTCATACATAGTGGACATCAGGAAAGATTTTGTTCCT  385

seq1  AGAGGAAACCATTAGGGAGGGCATAAATAGACATGCCTTGGTGTTATAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGAAACCATTAGGGAGGGCATAAATAGACATGCCTTGGTGTTATAAA  435

seq1  TATAATTGGGAGGAAATATCCCACTCAAATTAATTATCCTGTACCTATAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAATTGGGAGGAAATATCCCACTCAAATTAATTATCCTGTACCTATAC  485

seq1  TGGAGGGTGGCTGATTCCATCCCCCAAATGATATTCACCTCATCTTTACC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGGGTGGCTGATTCCATCCCCCAAATGATATTCACCTCATCTTTACC  535

seq1  ATGCCATAATATTAGATCGGTGTCTATGTAATTAGGATTTTCCCAGAATC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCCATAATATTAGATCGGTGTCTATGTAATTAGGATTTTCCCAGAATC  585

seq1  ATCCCCACTTAACCCACAGACATGGGTAAGCAGGATTTCCCCCATCTTAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCCCACTTAACCCACAGACATGGGTAAGCAGGATTTCCCCCATCTTAA  635

seq1  CAGCTAGTGCATAGTGAAAGTGGCAGGCCACCAGCAGCTACTGTAAGGAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTAGTGCATAGTGAAAGTGGCAGGCCACCAGCAGCTACTGTAAGGAA  685

seq1  TGGCTGAGTGGCAGTTCTAATTGACCACTTCTACCCATGTTCCTCTTCAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTGAGTGGCAGTTCTAATTGACCACTTCTACCCATGTTCCTCTTCAG  735

seq1  AATGTACAATATGAGCCAAGCTGTCACGGCATCCTGCCAATCACACAAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTACAATATGAGCCAAGCTGTCACGGCATCCTGCCAATCACACAAAA  785

seq1  TCTGACCTAGAGGAAGCACTATATCAAAGGCAGCTGTTGATCTACTCAAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGACCTAGAGGAAGCACTATATCAAAGGCAGCTGTTGATCTACTCAAT  835

seq1  AAATTCAGGTTTCTTTGTAGTGTCATCCATTGCATCCAGGCTATCACAGT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTCAGGTTTCTTTGTAGTGTCATCCATTGCATCCAGGCTATCACAGT  885

seq1  GAAGAGAATACATAATCAAAACATGAAGATCATGAATTTAGTGGACTATA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAGAATACATAATCAAAACATGAAGATCATGAATTTAGTGGACTATA  935

seq1  GATGACGACTTCAAATCTAAATATGTTCTCTTGCTGCCCAAACAAGAAAC  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGACGACTTCAAATCTAAATATGTTCTCTTGCTGCCCAAACAAGAAAC  985

seq1  AATTGGGTACTTGACACATCGAGTTGTAGAATTGCATATTTGTTCTTTGG  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGGGTACTTGACACATCGAGTTGTAGAATTGCATATTTGTTCTTTGG  1035

seq1  GCTACTTAGCTTGTGCAGAGGCATGGCCTAGGTGGCATGTAGCTTTATAA  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTACTTAGCTTGTGCAGAGGCATGGCCTAGGTGGCATGTAGCTTTATAA  1085

seq1  CACCAGAAAGAAAACAATGAATTC  1124
      ||||||||||||||||||||||||
seq2  CACCAGAAAGAAAACAATGAATTC  1109

seq1: chr11_18290549_18291088
seq2: B6Ng01-329J11.g_68_594

seq1  GAATTCCTCCAAATAGCTGAGTAGCTGAGTAACAAAATCTGTGAACACTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTCCAAATAGCTGAGTAGCTGAGTAACAAAATCTGTGAACACTT  50

seq1  CATTTGTTATGTTGTGAGCCAAACATACTCTGTGCAAGTTTAATGTGTAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTGTTATGTTGTGAGCCAAACATACTCTGTGCAAGTTTAATGTGTAA  100

seq1  G--TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT  148
      |  |||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT  150

seq1  CTCTCTCTCTGTGTGTGTGTGTGTGTGTGTGTAGCATGTTTCGGGGATAT  198
      ||||||||||||||||||||||||||||||||||| ||||  |||||  |
seq2  CTCTCTCTCTGTGTGTGTGTGTGTGTGTGTGTAGCTTGTTGTGGGGA-GT  199

seq1  AGTGAAAGGTTTGATAAAGACAT---GTTGC-CTTAAAAATAGTCAGTCC  244
      ||| |     || | ||| | ||    || | ||| ||| |||| | |||
seq2  AGTCA-----TTAAAAAAAAAATAGCTTTACTCTTTAAACTAGTTA-TCC  243

seq1  TAACTTCTTATAGTGATATTCTTCTATTAAAATTGTATTTTGAGTTTCAA  294
      |  | |||  |   | | ||||| | || |||||| ||||||| | ||||
seq2  T--CATCTATTTTCGCTCTTCTT-TTTTGAAATTGCATTTTGACTCTCAA  290

seq1  TATTTTTTCAAAGGCTTGAAATGCCATTTATGTAACGCAATATTCAAAGA  344
      |||||| |   ||||  | || ||| ||| || |      | || |  ||
seq2  TATTTTAT--GAGGC-CGCAAGGCCGTTTTTG-ACTTTTTTTTTTAGTGA  336

seq1  GTCATAGGACAAAAGTTTCATTAAGCTTTCAAGTTTATCATTGGTTACAT  394
      ||| | ||| ||   |||| |||  |||| |   | |||||||||||   
seq2  GTCTTTGGA-AATTTTTTCCTTACACTTT-AGACTAATCATTGGTTA-TG  383

seq1  AAAATTTGATGAATATTTCTTTCTAAAACAAATTCTGAAAAAAGTATTCA  444
      | ||||  |||   ||| |||| ||  || ||||| |||  ||| || ||
seq2  AGAATTCCATGTGCATTCCTTTGTACCACGAATTCCGAAGTAAG-ATCCA  432

seq1  ATTATTAACAGTGAAATTAAAATTGTTAAAA----------TTATTAACA  484
                  ||||| || |||  | | |            |   |||
seq2  ------------GAAATGAACATTTGTGAGACGGGGGGGGGAGAGAGACA  470

seq1  G-TAAAAACATGAGCAAACATCTACTATGTCTAGAGAGGGAACCAGTGAT  533
      |  | | ||||||    || || |||||||||||||||||||| ||| ||
seq2  GACACAGACATGACTCCACTTCGACTATGTCTAGAGAGGGAACAAGTAAT  520

seq1  ATACTTA  540
      |||||||
seq2  ATACTTA  527

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information