BAC Information

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BAC

Clone NameB6Ng01-329N13
Chromosome11 (Build37)
Map Location 121,053,004 - 121,202,686
singlet/doubletdoublet
Overlap gene1110031I02Rik, Hexdc, BC017643, Narf, Foxk2, Wdr45l
Upstream geneLOC100043389, Bahcc1, Actg1, Fscn2, 2310003H01Rik, Nploc4, Tspan10, Pde6g, 1810049H13Rik, 3110023B02Rik, 2600005N12Rik, Hgs, Mrpl12, Slc25a10, LOC667716, Gcgr, BC003940, Dysfip1, P4hb, Arhgdia, LOC100042371, Thoc4, Anapc11, Npb, Pcyt2, Sirt7, Mafg, Pycr1, 1110012N22Rik, 5730593N15Rik, Aspscr1, Stra13, Lrrc45, Rac3, Dcxr, Cbr2, Hmga1-rs1, LOC667778, Rfng, Gps1, Dus1l, Fasn, Ccdc57, LOC100043454, Slc16a3, Csnk1d, Cd7, Sectm1b, Sectm1a, LOC637008, 4921530G04Rik, Tex19, Uts2r
Downstream geneRab40b, BC032265, Fn3k, Tbcd, Zfp750, B3gntl1, Metrnl, Ptchd3, LOC667879, LOC674842
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-329N13.bB6Ng01-329N13.g
ACCGA116695GA116696
length5341,141
definitionB6Ng01-329N13.b B6Ng01-329N13.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(121,202,147 - 121,202,686)(121,053,004 - 121,054,140)
sequence
cagccagccagggctactatagtgagactctgtcttgaaaataagtaaat
aataaagataagataaggaaatgctgaatattgtattcatttttttctat
ttgataacattttaacttgttcaattatcttttttaaaactgtcatttca
gaatttttagaaggaggagttggccatgtggaaatgttatttcgctgtaa
ctatttagctttagttggtggtggaaaaaaaccgaaataccctcccaaca
aaggtacagtagttcgtctttcaaaacctcatcatgtatgtagtggtatc
ctgaactttgtaggacatcccatgtctgcagtcatgcagagcctccctac
tagtcctttgaggtattgagggttaaccactgggaaagaagcttccagaa
agtgtgtggatggatggatggatggatgggaagactggatgtcagctgtt
attgaatatgttgtgggtgtgcttcacctgtaggcagggagtgtagattg
aggctaaagcaaggttcaggaatggtgtttcccc
gaattcaagtcctgggacccacatggtggaaggcaaaaccagactccagc
aggttgtcctcctgcttccacacaggcaccatggaatgtgcatgcacata
catatacacactaaaagatattatttaaaaagcttcatgaaagacgaatt
ctccctgtattgtagagaaatattttttaaagatttgttttatttttatt
tgtgggtacgtgcgtgcaaaagcagtgcttccgcagagcattcttactgc
gtgacactaagcaactgacttgacttctctgagccttagttccctctgaa
agaacagagtgatacaccagggcttggtgacacacacctttaatcccagc
atttgagaggcagagacaggtggatctctctgagtttgagactaacctgg
tcttcatagtgagttagttctaggtcagccaaggctacacagtgagacct
tgtcccaaaaaaaggagaaaaaaagattgtacatgtttttcttagactgg
ttatggttagttcaggacctggaggagcaaagcaagacactgtgggtggg
aaagctggaactctcaagggagggtgtcacaggtagagaaggtgtgatgg
tttgcatatgcttgacccagtgagtggtgctactagaaggtatggccctg
ttggagtaggtgtggccttgtcggaataggtgtaccactgtgggtgtggg
ttttaaaaccctcattctagttgtctggaaatcagtattctgctagcagc
ctttcggatgaagatgtggaactcttagctctcagctctgcctgcatcgt
gcctgcctggatgctgccatgctccccccttgatgacaatggactgaacc
tctgaacctgtaagccagccccaaataaatgttgttcttataagagttgc
cttggtcatagtgtctgttcacagctgtaaaacctcagttcaatattttc
tgaaataagaagcaggaagtttaagctcctacaagaagcacacagtgtgg
caagcatttctgctgaacatcttacttgtagatgctcggaacatacttgc
agatagctaaggtgcaatagcagttccagtgtcctgatattgtcaaggcc
agaagatgtcatgcctgccacatgccaagctgttgccaagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_121202147_121202686
seq2: B6Ng01-329N13.b_45_584 (reverse)

seq1  GGGGAAACACCATTCCTAAACCTTGCTTTAGCCTCAATCTTGACTCCCTG  50
      ||||||||||||||||| ||||||||||||||||||||||  ||||||||
seq2  GGGGAAACACCATTCCTGAACCTTGCTTTAGCCTCAATCTACACTCCCTG  50

seq1  CCTACAGGTGAAGCACACCCACAACATGTTCAATAACAGCTGACATCCAG  100
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  CCTACAGGTGAAGCACACCCACAACATATTCAATAACAGCTGACATCCAG  100

seq1  TCTTCCCATCCATCCATCCATCCATCCACACACTTTCTGGAAGCTTCTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCCCATCCATCCATCCATCCATCCACACACTTTCTGGAAGCTTCTTT  150

seq1  CCCAGTGGTTAACCCTCAATACCTCAAAGGACTAGTAGGGAGGCTCTGCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGTGGTTAACCCTCAATACCTCAAAGGACTAGTAGGGAGGCTCTGCA  200

seq1  TGACTGCAGACATGGGATGTCCTACAAAGTTCAGGATACCACTACATACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTGCAGACATGGGATGTCCTACAAAGTTCAGGATACCACTACATACA  250

seq1  TGATGAGGTTTTGAAAGACGAACTACTGTACCTTTGTTGGGAGGGTATTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGAGGTTTTGAAAGACGAACTACTGTACCTTTGTTGGGAGGGTATTT  300

seq1  CGGTTTTTTTCCACCACCAACTAAAGCTAAATAGTTACAGCGAAATAACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGTTTTTTTCCACCACCAACTAAAGCTAAATAGTTACAGCGAAATAACA  350

seq1  TTTCCACATGGCCAACTCCTCCTTCTAAAAATTCTGAAATGACAGTTTTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCACATGGCCAACTCCTCCTTCTAAAAATTCTGAAATGACAGTTTTA  400

seq1  AAAAAGATAATTGAACAAGTTAAAATGTTATCAAATAGAAAAAAATGAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAGATAATTGAACAAGTTAAAATGTTATCAAATAGAAAAAAATGAAT  450

seq1  ACAATATTCAGCATTTCCTTATCTTATCTTTATTATTTACTTATTTTCAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATATTCAGCATTTCCTTATCTTATCTTTATTATTTACTTATTTTCAA  500

seq1  GACAGAGTCTCACTATAGTAGCCCTGGCTGGCTGGAATTC  540
      ||||||||||||||||||||||||||||||||||||||||
seq2  GACAGAGTCTCACTATAGTAGCCCTGGCTGGCTGGAATTC  540

seq1: chr11_121053004_121054140
seq2: B6Ng01-329N13.g_66_1206

seq1  GAATTCAAGTCCTGGGACCCACATGGTGGAAGGCAAAACCAGACTCCAGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAGTCCTGGGACCCACATGGTGGAAGGCAAAACCAGACTCCAGC  50

seq1  AGGTTGTCCTCCTGCTTCCACACAGGCACCATGGAATGTGCATGCACATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTGTCCTCCTGCTTCCACACAGGCACCATGGAATGTGCATGCACATA  100

seq1  CATATACACACTAAAAGATATTATTTAAAAAGCTTCATGAAAGACGAATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATACACACTAAAAGATATTATTTAAAAAGCTTCATGAAAGACGAATT  150

seq1  CTCCCTGTATTGTAGAGAAATATTTTTTAAAGATTTGTTTTATTTTTATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCTGTATTGTAGAGAAATATTTTTTAAAGATTTGTTTTATTTTTATT  200

seq1  TGTGGGTACGTGCGTGCAAAAGCAGTGCTTCCGCAGAGCATTCTTACTGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGGTACGTGCGTGCAAAAGCAGTGCTTCCGCAGAGCATTCTTACTGC  250

seq1  GTGACACTAAGCAACTGACTTGACTTCTCTGAGCCTTAGTTCCCTCTGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGACACTAAGCAACTGACTTGACTTCTCTGAGCCTTAGTTCCCTCTGAA  300

seq1  AGAACAGAGTGATACACCAGGGCTTGGTGACACACACCTTTAATCCCAGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACAGAGTGATACACCAGGGCTTGGTGACACACACCTTTAATCCCAGC  350

seq1  ATTTGAGAGGCAGAGACAGGTGGATCTCTCTGAGTTTGAGACTAACCTGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGAGAGGCAGAGACAGGTGGATCTCTCTGAGTTTGAGACTAACCTGG  400

seq1  TCTTCATAGTGAGTTAGTTCTAGGTCAGCCAAGGCTACACAGTGAGACCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCATAGTGAGTTAGTTCTAGGTCAGCCAAGGCTACACAGTGAGACCT  450

seq1  TGTCCCAAAAAAAGGAGAAAAAAAGATTGTACATGTTTTTCTTAGACTGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCCAAAAAAAGGAGAAAAAAAGATTGTACATGTTTTTCTTAGACTGG  500

seq1  TTATGGTTAGTTCAGGACCTGGAGGAGCAAAGCAAGACACTGTGGGTGGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGGTTAGTTCAGGACCTGGAGGAGCAAAGCAAGACACTGTGGGTGGG  550

seq1  AAAGCTGGAACTCTCAAGGGAGGGTGTCACAGGTAGAGAAGGTGTGATGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCTGGAACTCTCAAGGGAGGGTGTCACAGGTAGAGAAGGTGTGATGG  600

seq1  TTTGCATATGCTTGACCCAGTGAGTGGTGCTACTAGAAGGTATGGCCCTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCATATGCTTGACCCAGTGAGTGGTGCTACTAGAAGGTATGGCCCTG  650

seq1  TTGGAGTAGGTGTGGCCTTGTCGGAATAGGTGTACCACTGTGGGTGTGGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGAGTAGGTGTGGCCTTGTCGGAATAGGTGTACCACTGTGGGTGTGGG  700

seq1  TTTTAAAACCCTCATTCTAGTTGTCTGGAAATCAGTATTCTGCTAGCAGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAAAACCCTCATTCTAGTTGTCTGGAAATCAGTATTCTGCTAGCAGC  750

seq1  C-TTCGGATGAAGATGTGGAACTCTTAGCTCTCAGCTCTGCCTGCATCGT  799
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCGGATGAAGATGTGGAACTCTTAGCTCTCAGCTCTGCCTGCATCGT  800

seq1  GCCTGCCTGGATGCTGCCATGCTCCCCCCTTGATGACAATGGACTGAACC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGCCTGGATGCTGCCATGCTCCCCCCTTGATGACAATGGACTGAACC  850

seq1  TCTGAACCTGTAAGCCAGCCCCAAATAAATGTTGTCCTTATAAGAGTTGC  899
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  TCTGAACCTGTAAGCCAGCCCCAAATAAATGTTGTTCTTATAAGAGTTGC  900

seq1  CTTGGTCATAGTGTCTGTTCACAGCTGTAAAACCCTCAGTTC-ATATTTC  948
      |||||||||||||||||||||||||||||||| ||||||||| |||||| 
seq2  CTTGGTCATAGTGTCTGTTCACAGCTGTAAAA-CCTCAGTTCAATATTTT  949

seq1  TTGAAATAAGAAGCAGGAGGTTTAAGCTCCTACAAGAAGCACACCAGGTG  998
       ||||||||||||||||| |||||||||||||||||||||||||   |||
seq2  CTGAAATAAGAAGCAGGAAGTTTAAGCTCCTACAAGAAGCACAC--AGTG  997

seq1  TGGCAGGCATTTCTGCTGAGCA-CCTACTTGTAGGATGCTCGGAACATAC  1047
      ||||| ||||||||||||| || | |||||||| ||||||||||||||||
seq2  TGGCAAGCATTTCTGCTGAACATCTTACTTGTA-GATGCTCGGAACATAC  1046

seq1  -TGCAGATAGC--AGGTGCAATAGGGAGTTTCCAGTGCCCTG-TATTG-C  1092
       ||||||||||  |||||||||| | || |||||||| |||| ||||| |
seq2  TTGCAGATAGCTAAGGTGCAATA-GCAG-TTCCAGTGTCCTGATATTGTC  1094

seq1  A--GGCAGAAGAGTGCATGCCTGCCACATGCAGAGCTGTTGCCAAGG  1137
      |  | |||||||   ||||||||||||||||  ||||||||||||||
seq2  AAGGCCAGAAGATGTCATGCCTGCCACATGCCAAGCTGTTGCCAAGG  1141