BAC Information

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BAC

Clone NameB6Ng01-331C16
Chromosome11 (Build37)
Map Location 74,164,338 - 74,165,415
singlet/doubletsinglet
Overlap genenone
Upstream geneOlfr20, Olfr376, Olfr377-ps1, Olfr1, Olfr75-ps1, Olfr378, Olfr379-ps1, Olfr380, Olfr381, Olfr382, Olfr383-ps1, Olfr385, Olfr386, Olfr387-ps1, 1700012C15Rik, Olfr388-ps1, Olfr389, Olfr390, Olfr391-ps1, Olfr392, Olfr393, Olfr394, Olfr395, Olfr396-ps1, Olfr23, Olfr22-ps1, Olfr397, Olfr398, Olfr139, Olfr399, OTTMUSG00000006163, LOC668567, Olfr400-ps1, Olfr401, Olfr402, Olfr403, Olfr43, Olfr404-ps1, Olfr405-ps1, Olfr406, Olfr407-ps1, Olfr59, Olfr408-ps1, Olfr409-ps1, LOC193079, Olfr410, Olfr411
Downstream geneOlfr412, Garnl4, E130309D14Rik, 1300001I01Rik, Pafah1b1, Mett10d, Mnt, Rutbc1, Tsr1, Srr, LOC100042478, Smg6, LOC100043429, LOC627835, Hic1, LOC668604, Ovca2, Dph1, Rtn4rl1, Rpa1, Smyd4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-331C16.bB6Ng01-331C16.g
ACCGA117613GA117614
length1,2231,085
definitionB6Ng01-331C16.b B6Ng01-331C16.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctccttcgcctcggacgtgtcactccctgattggctgcagcccat
cggccgagttgacgtcacggggaaggcagagcacaagtagtcataagata
cccttggcacatgcgcagattatttgtttaccacttagaacacagctgtc
agcgccatcttgtaacggcgaatgtgggcgcggctcccaacatctccccc
tatccttttaataagagcaaataggccacccatattaatgagagtggaga
tagaggtcaaatccccagtgtgtaggtaaaggagccatgtacaggattag
ctcttaggctcacaggcttttacccagagcaaccctgacctgttcccgtg
tcgttttgcctgggggaagggaactaggacactgaaccttcatgaaagat
gacatgtctccctagaataggctcatatatgccgcagagcctttccattg
cagtgcttagccttgcaactctctcgggctgctgaagcacactcactcta
tcccgtgcaatgagtctagcctcgtgagatgtaagagctgagtggccagc
gacctattgcctaagcatagataaccatatatcagggggagctccatgtt
ctagtcctgcaagcgcctgggcaataaccaccttgtctctcctagtttgg
gccttaagcttacagaccaatcaaagaagcaacactaatccacagcaaag
tgtatctccaaataatattaatcccacccattttttaaagaaagaaaatg
ctgaggagatccaattgggtaatcctttggtcagcgacaggtccaagcgc
gtggagttgacctgaagtctcaattcccgaaggatctgttcaaattcagc
catccaattctgtaacatatactgaaaaagactttttgacaatttagctg
tcctagtaaatttaacatactgaatgggaaataacacacaatcccagaac
ttttgttcacatccctgctgagttatttgtcataatacatctagttgtat
ctggacaagatctaatgagttgattaaccagcatgagacctctctgtatc
ttgacattagctgaggcctgttcatctatgacttgtagtcacctgaagct
gaaaaaagtgttaaatgggtgtcagttgttcttggaacctgttccagaaa
cagagctaggcctgttctggatttaaggctaactcagttcctagttaagg
tgggtcaaaaaaaggcatcagta
gaattcttcctaatgagtccttagaaacatctcatagaaacaaagattaa
aaaatcccacagcagtgcatctgtgcctttcactcaagcttgtacttcct
ataaacacatcactttctcattttgcatagtttctggctcagccaagaga
cctcctcagccccttcagcccagtccagtgtcccttctcactgaagtcat
gttggtctcgtggctttagttctaaagttcattcagcatttattttggaa
atactgaaaatctactgcatataaactaggtattgagaatatgaagctaa
gacagctgaatgtcttccctcccataagccatgaaggaacacagctgtgt
cctacagagaagtggccatacaagagggtggcagagacaaagatgctaga
gtaggttagcgggaagcagtggaaagcagggtgacccccataggggatgt
gtattttcattcaaaaaagtttagagttaggaataagaaatcattctaga
tgaaacagttgtggatagaagaaacaaaagagcactttgtaattttagtt
agactgtattgcagagagcaagcaggaggtactttatgctttggtttttt
gatatgccttggagttatcttactcccattagtatgccaattcttgtgac
acatatggaataacttctaggtctatggttaggatccacaagatgaccca
gtgaatgtgaccattgatttaaggggattttagacaatgtaagagttagc
aaattgtgttaccctaccttactcacagacacagcagacacatagtcact
atattgtggacccttcattttggattttgattggcactctgccaaggatc
cctgtgcccatatctgctgctttaactaagttgtatatagaaaattaact
gtatagttagggtgtgtcttcagtgtctagcacagtagttctcaatctat
ggatcatgtcccctttgggctcacatatcagaccactttgtgtatcagat
aattttacattatgatttatgaagcagccaagtttaccgggtatgaaatt
agccaacattaataatttatgtttggaaggtcacc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_74164338_74165415
seq2: B6Ng01-331C16.g_66_1150 (reverse)

seq1  GGTGACC-TCCAAACATAAAATTATT-ATGTT-GCT-ATTTCATACCCG-  45
      ||||||| ||||||||| |||||||| ||||| ||| |||||||||||| 
seq2  GGTGACCTTCCAAACAT-AAATTATTAATGTTGGCTAATTTCATACCCGG  49

seq1  -TAACTTTGCTGCTTTCATAAATCATAATGTAAA--TATCTGATACACAA  92
        ||||| ||||| ||||||||||||||||||||  ||||||||||||||
seq2  TAAACTTGGCTGC-TTCATAAATCATAATGTAAAATTATCTGATACACAA  98

seq1  AGT-GTCTGATATGTGAGCCCAAAGGGGACATGATCCATAGATTGAGAAC  141
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGTCTGATATGTGAGCCCAAAGGGGACATGATCCATAGATTGAGAAC  148

seq1  TACTGTGCTAGACACTGAAGACACACCCTAACTATACAGTTAATTTTCTA  191
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGTGCTAGACACTGAAGACACACCCTAACTATACAGTTAATTTTCTA  198

seq1  TATACAACTTAGTTAAAGCAGCAGATATGGGCACAGGGATCCTTGGCAGA  241
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACAACTTAGTTAAAGCAGCAGATATGGGCACAGGGATCCTTGGCAGA  248

seq1  GTGCCAATCAAAATCCAAAATGAAGGGTCCACAATATAGTGACTATGTGT  291
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCCAATCAAAATCCAAAATGAAGGGTCCACAATATAGTGACTATGTGT  298

seq1  CTGCTGTGTCTGTGAGTAAGGTAGGGTAACACAATTTGCTAACTCTTACA  341
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTGTGTCTGTGAGTAAGGTAGGGTAACACAATTTGCTAACTCTTACA  348

seq1  TTGTCTAAAATCCCCTTAAATCAATGGTCACATTCACTGGGTCATCTTGT  391
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCTAAAATCCCCTTAAATCAATGGTCACATTCACTGGGTCATCTTGT  398

seq1  GGATCCTAACCATAGACCTAGAAGTTATTCCATATGTGTCACAAGAATTG  441
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATCCTAACCATAGACCTAGAAGTTATTCCATATGTGTCACAAGAATTG  448

seq1  GCATACTAATGGGAGTAAGATAACTCCAAGGCATATCAAAAAACCAAAGC  491
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATACTAATGGGAGTAAGATAACTCCAAGGCATATCAAAAAACCAAAGC  498

seq1  ATAAAGTACCTCCTGCTTGCTCTCTGCAATACAGTCTAACTAAAATTACA  541
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAGTACCTCCTGCTTGCTCTCTGCAATACAGTCTAACTAAAATTACA  548

seq1  AAGTGCTCTTTTGTTTCTTCTATCCACAACTGTTTCATCTAGAATGATTT  591
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGCTCTTTTGTTTCTTCTATCCACAACTGTTTCATCTAGAATGATTT  598

seq1  CTTATTCCTAACTCTAAACTTTTTTGAATGAAAATACACATCCCCTATGG  641
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATTCCTAACTCTAAACTTTTTTGAATGAAAATACACATCCCCTATGG  648

seq1  GGGTCACCCTGCTTTCCACTGCTTCCCGCTAACCTACTCTAGCATCTTTG  691
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTCACCCTGCTTTCCACTGCTTCCCGCTAACCTACTCTAGCATCTTTG  698

seq1  TCTCTGCCACCCTCTTGTATGGCCACTTCTCTGTAGGACACAGCTGTGTT  741
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTGCCACCCTCTTGTATGGCCACTTCTCTGTAGGACACAGCTGTGTT  748

seq1  CCTTCATGGCTTATGGGAGGGAAGACATTCAGCTGTCTTAGCTTCATATT  791
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCATGGCTTATGGGAGGGAAGACATTCAGCTGTCTTAGCTTCATATT  798

seq1  CTCAATACCTAGTTTATATGCAGTAGATTTTCAGTATTTCCAAAATAAAT  841
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAATACCTAGTTTATATGCAGTAGATTTTCAGTATTTCCAAAATAAAT  848

seq1  GCTGAATGAACTTTAGAACTAAAGCCACGAGACCAACATGACTTCAGTGA  891
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGAATGAACTTTAGAACTAAAGCCACGAGACCAACATGACTTCAGTGA  898

seq1  GAAGGGACACTGGACTGGGCTGAAGGGGCTGAGGAGGTCTCTTGGCTGAG  941
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGGACACTGGACTGGGCTGAAGGGGCTGAGGAGGTCTCTTGGCTGAG  948

seq1  CCAGAAACTATGCAAAATGAGAAAGTGATGTGTTTATAGGAAGTACAAGC  991
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAAACTATGCAAAATGAGAAAGTGATGTGTTTATAGGAAGTACAAGC  998

seq1  TTGAGTGAAAGGCACAGATGCACTGCTGTGGGATTTTTTAATCTTTGTTT  1041
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGTGAAAGGCACAGATGCACTGCTGTGGGATTTTTTAATCTTTGTTT  1048

seq1  CTATGAGATGTTTCTAAGGACTCATTAGGAAGAATTC  1078
      |||||||||||||||||||||||||||||||||||||
seq2  CTATGAGATGTTTCTAAGGACTCATTAGGAAGAATTC  1085