BAC Information

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BAC

Clone NameB6Ng01-332N22
Chromosome11 (Build37)
Map Location 57,170,997 - 57,353,232
singlet/doubletdoublet
Overlap geneLOC667878, 1810073G14Rik, Mfap3
Upstream geneLOC624168, Gria1
Downstream geneGalnt10, Sap30l, Hand1, LOC624605, Larp1, LOC676527, LOC667947, Cnot8, Gemin5, Mrpl22, Irgb10, Igtp, LOC263305, LOC100041816, EG668249, 4930438A08Rik, Zfp692, Zfp672, 1700047K16Rik, Sh3bp5l, 2210415F13Rik, LOC624814, 1810065E05Rik, OTTMUSG00000005737, 4930504O13Rik, Olfr30, Olfr333-ps1, Olfr332, Olfr331, Olfr330
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-332N22.bB6Ng01-332N22.g
ACCGA118846GA118847
length472893
definitionB6Ng01-332N22.b B6Ng01-332N22.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(57,170,997 - 57,171,471)(57,352,339 - 57,353,232)
sequence
gaattcctgagtgtgtgggtcttttccttctgtttgtttgttttgtccta
ttccaaagcattgtttattgtttttttatattttctcttatattattatt
atccctcacaagtctgttttctaataagagacataaatggggtgggttct
tatggaagggagatggggagcaactgggaaaaagagaggaagaggaaacc
ataaatttgatatattatgtgaaaaaaaatctagcttcaataaaagggaa
aaatggtgtttgaataaaaaaggagcccgtgagactacttcaaaaccatc
tgacctgtcttctgcatcacactgatgacccttcctacaagagaacaaag
ctcttcaacaagccaagaagtatgaaacaaggacaggcctgatgcccttt
gagctgtaacctggttgctatcaacattgggagcaaatctactgacttct
ttgcaaacctacttacaaatac
gaattcaatcttccagttcctgtctacaagtactgggattacaagcctgt
gccatcacctctagtccatgtggtgccggggactgaaccaagggacttgt
acatgccaaccaggctacatctggtcccttctgatgagctttagagactc
ttgtcacctgtactgaaagaacctagtggggaaacccccactcaactccc
gattctgtgtgcactcaagaaacacgaacagaacagaacagaatgccttg
atgtaaaaacataaggtagtttaatggcagagctccgggttgaaacgtat
ctcacgcaggagacagtggattcgaccacgaggcttggaagctaggggtt
tttatagaaaagggtctggggctgggggtggaattggtgcagtttcacat
gattggttcatttaaacatcagcagcctgttaacatttaacttaggtcag
aagggctggatatagggaggccagtccagcatgtcattctctttatcttt
atggccaagcagcctcaggaatgtcttaacaatgggcctgccctggcatg
tcctggcctgttctgctatgttctcagccccaggtttcaaagctcacaaa
caactctttgggctatttgacataaattacatgaatcacaggtctcaagc
tttattttctttcagtacttactcaatcacagggtatctatctttctcta
gaacattctgggggttggaagaaccacactgatcttgctgatcattaaaa
acgcaatcattggggctgggagaaatggctcaggggttaagagcacagac
tgctcttcccaaggtcgtgagattcacatccaatcaaaccacatggtggc
tccatccttttaaattacgatctggacgatctctttgtgtctg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_57170997_57171471
seq2: B6Ng01-332N22.b_44_515

seq1  GAATTCCTGAGTGTGTGGGTCTTTTCCTTCTGTTTGTTTGTTTTGTCCTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTGAGTGTGTGGGTCTTTTCCTTCTGTTTGTTTGTTTTGTCCTA  50

seq1  TTCCAAAGCATTGTTTATTGTTTTATTATATTTTCTCTTATATTATTATT  100
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  TTCCAAAGCATTGTTTATTGTTTTTTTATATTTTCTCTTATATTATTATT  100

seq1  ATCCCTCAGAAGTCTGTTTTCTAATAAGAGACATAAATGGGGTGGGTTCA  150
      |||||||| |||||||||||||||||||||||||||||||||||||||| 
seq2  ATCCCTCACAAGTCTGTTTTCTAATAAGAGACATAAATGGGGTGGGTTCT  150

seq1  GATGGAAGGGAGATGGGGAGCAACTGGGAAAAAGAGAGGAAGAGGAAACC  200
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGAAGGGAGATGGGGAGCAACTGGGAAAAAGAGAGGAAGAGGAAACC  200

seq1  ATAATCAGGATATATTATGTGAAAAAAAATCTAGCTTCAATAAAAGGGAA  250
      ||||    ||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAATTTGATATATTATGTGAAAAAAAATCTAGCTTCAATAAAAGGGAA  250

seq1  AAATGGTGTTTGAATAAAAAAGGAGCCCTTGAGTCTAATTCGAAACCATC  300
      |||||||||||||||||||||||||||| |||| ||| ||| ||||||||
seq2  AAATGGTGTTTGAATAAAAAAGGAGCCCGTGAGACTACTTCAAAACCATC  300

seq1  TGAGCTGTCTTCTGCATCACACTGAGGACCCTTCCTACAAGAGAACAAAG  350
      ||| ||||||||||||||||||||| ||||||||||||||||||||||||
seq2  TGACCTGTCTTCTGCATCACACTGATGACCCTTCCTACAAGAGAACAAAG  350

seq1  CTCTTCACACAAGCCAAGAAGTATGACAGAGGGACAGGCCTGATGCCCTT  400
      ||||||| |||||||||||||||||| | | |||||||||||||||||||
seq2  CTCTTCA-ACAAGCCAAGAAGTATGAAACAAGGACAGGCCTGATGCCCTT  399

seq1  TGAGCTGTGAACCTGGTTGCTCTCAACAATGGGAGCAAATCTACTGCCTT  450
      |||||||| |||||||||||| |||||| ||||||||||||||||| |||
seq2  TGAGCTGT-AACCTGGTTGCTATCAACATTGGGAGCAAATCTACTGACTT  448

seq1  CTTTGCCTAACCTACTTACAGATAC  475
      ||||| | |||||||||||| ||||
seq2  CTTTG-CAAACCTACTTACAAATAC  472

seq1: chr11_57352339_57353232
seq2: B6Ng01-332N22.g_69_961 (reverse)

seq1  CAGACATACCAAAAGAGATCGT-CAGATCTTATTTTGGATGGTTGTGAGC  49
      ||||||     ||||||||||| |||||| || |||  | || || ||||
seq2  CAGACA----CAAAGAGATCGTCCAGATCGTAATTTAAAAGGATG-GAGC  45

seq1  CACCATGTGG-TTGCTGGGATTTGAA-CTCACGACCTTTGGAAGAGCAGT  97
      |||||||||| ||| | |||| |||| ||||||||||| |||||||||||
seq2  CACCATGTGGTTTGATTGGATGTGAATCTCACGACCTTGGGAAGAGCAGT  95

seq1  CAGTGCTCTTAACCACTGAGCCATCTCT-CCAGCCCCAATGATTGCATTC  146
      | |||||||||||| ||||||||| ||| ||||||||||||||||| || 
seq2  CTGTGCTCTTAACCCCTGAGCCATTTCTCCCAGCCCCAATGATTGCGTTT  145

seq1  TTAATGATCAACAAGATCAGTGTGGTTCTTCCAACCCCCAGAATGTTCTA  196
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  TTAATGATCAGCAAGATCAGTGTGGTTCTTCCAACCCCCAGAATGTTCTA  195

seq1  GAGAAAGATAGATACCCTGTGATTGAGTAAGTACTGAAAGAAAATAAAGC  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAAGATAGATACCCTGTGATTGAGTAAGTACTGAAAGAAAATAAAGC  245

seq1  TTGAGACCTGTGATTCATGTAATTTATGTCAAATAGCCCAAAGAGTTGTT  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGACCTGTGATTCATGTAATTTATGTCAAATAGCCCAAAGAGTTGTT  295

seq1  TGTGAGCTTTGAAACCTGGGGCTGAGAACATAGCAGAACAGGCCAGGACA  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGAGCTTTGAAACCTGGGGCTGAGAACATAGCAGAACAGGCCAGGACA  345

seq1  TGCCAGGGCAGGCCCATTGTTAAGACATTCCTGAGGCTGCTTGGCCATAA  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCAGGGCAGGCCCATTGTTAAGACATTCCTGAGGCTGCTTGGCCATAA  395

seq1  AGATAAAGAGAATGACATGCTGGACTGGCCTCCCTATATCCAGCCCTTCT  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATAAAGAGAATGACATGCTGGACTGGCCTCCCTATATCCAGCCCTTCT  445

seq1  GACCTAAGTTAAATGTTAACAGGCTGCTGATGTTTAAATGAACCAATCAT  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCTAAGTTAAATGTTAACAGGCTGCTGATGTTTAAATGAACCAATCAT  495

seq1  GTGAAACTGCACCAATTCCACCCCCAGCCCCAGACCCTTTTCTATAAAAA  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAAACTGCACCAATTCCACCCCCAGCCCCAGACCCTTTTCTATAAAAA  545

seq1  CCCCTAGCTTCCAAGCCTCGTGGTCGAATCCACTGTCTCCTGCGTGAGAT  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTAGCTTCCAAGCCTCGTGGTCGAATCCACTGTCTCCTGCGTGAGAT  595

seq1  ACGTTTCAACCCGGAGCTCTGCCATTAAACTACCTTATGTTTTTACATCA  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGTTTCAACCCGGAGCTCTGCCATTAAACTACCTTATGTTTTTACATCA  645

seq1  AGGCATTCTGTTCTGTTCTGTTCGTGTTTCTTGAGTGCACACAGAATCGG  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCATTCTGTTCTGTTCTGTTCGTGTTTCTTGAGTGCACACAGAATCGG  695

seq1  GAGTTGAGTGGGGGTTTCCCCACTAGGTTCTTTCAGTACAGGTGACAAGA  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTGAGTGGGGGTTTCCCCACTAGGTTCTTTCAGTACAGGTGACAAGA  745

seq1  GTCTCTAAAGCTCATCAGAAGGGACCAGATGTAGCCTGGTTGGCATGTAC  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCTAAAGCTCATCAGAAGGGACCAGATGTAGCCTGGTTGGCATGTAC  795

seq1  AAGTCCCTTGGTTCAGTCCCCGGCACCACATGGACTAGAGGTGATGGCAC  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCCCTTGGTTCAGTCCCCGGCACCACATGGACTAGAGGTGATGGCAC  845

seq1  AGGCTTGTAATCCCAGTACTTGTAGACAGGAACTGGAAGATTGAATTC  894
      ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTTGTAATCCCAGTACTTGTAGACAGGAACTGGAAGATTGAATTC  893