MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-333H23
Chromosome	11 (Build37)
Map Location	20,444,306 - 20,599,830
singlet/doublet	doublet
Overlap gene	Sertad2, LOC665953, Aftph
Upstream gene	LOC100042708, Glns-ps1, LOC665868, LOC100041937, Spred2, Actr2, Rab1, Cep68, LOC216544, Slc1a4, LOC100042746, LOC382492
Downstream gene	1110067D22Rik, LOC100042035, Peli1, Vps54, Ugp2, LOC100042081, 4932414J04Rik, Mdh1, AV249152, Pgam1-ps1
Link	Open Mouse BAC browser

Click to get alignment info.

name	LOC100042708 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042708
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs

name	Glns-ps1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14646 MGI:95740
definition	note : glutamine synthetase pseudogene 1 pseudo : _no_value

name	LOC665868 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:665868
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	LOC100041937 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041937
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 3 ESTs

name	Spred2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:114716 MGI:2150019
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Actr2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66713 MGI:1913963
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Rab1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:19324 MGI:97842
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cep68 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:216543 MGI:2667663
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC216544 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:216544
definition	note : 60S ribosomal protein L12 pseudogene pseudo : _no_value

name	Slc1a4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:55963 MGI:2135601
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100042746 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042746
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 132 mRNAs, 4325 ESTs, 24 Proteins

name	LOC382492 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:382492
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 697 ESTs, 9 Proteins

name	Sertad2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:58172 MGI:1931026
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	LOC665953 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:665953
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs, 1 Protein pseudo : _no_value

name	Aftph (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:216549 MGI:1923012
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	1110067D22Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:216551 MGI:1916114
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100042035 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042035
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 12 ESTs, 3 Proteins

name	Peli1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67245 MGI:1914495
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Vps54 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:245944 MGI:2178798
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ugp2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:216558 MGI:2183447
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100042081 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042081
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein pseudo : _no_value

name	4932414J04Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:237694 MGI:3605619
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Mdh1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:17449 MGI:97051
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	AV249152 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:216560 MGI:2144467
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Pgam1-ps1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:83437 MGI:1933119
definition	note : phosphoglycerate mutase 1, pseudogene 1 pseudo : _no_value

name	LOC100042708 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149261672 GeneID:100042708
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs product : hypothetical protein LOC100042708 transcript_id : XM_001479266.1

name	LOC100041937 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149261623 GeneID:100041937
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 3 ESTs product : hypothetical protein LOC100041937 transcript_id : XM_001477234.1

name	Spred2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142349024 GeneID:114716 MGI:2150019
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : sprouty-related, EVH1 domain containing 2 transcript_id : NM_033523.3

name	Actr2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:22122824 GeneID:66713 MGI:1913963
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ARP2 actin-related protein 2 homolog (yeast) transcript_id : NM_146243.1

name	Rab1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:133891747 GeneID:19324 MGI:97842
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RAB1, member RAS oncogene family transcript_id : NM_008996.3

name	Cep68 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142378303 GeneID:216543 MGI:2667663
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : centrosomal protein 68 transcript_id : NM_172260.3

name	Slc1a4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31980934 GeneID:55963 MGI:2135601
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : solute carrier family 1 (glutamate/neutral amino acid transporter), member 4 transcript_id : NM_018861.2

name	LOC100042746 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149261674 GeneID:100042746
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 132 mRNAs, 4324 ESTs, 24 Proteins product : similar to Glyceraldehyde-3-phosphate dehydrogenase (GAPDH), transcript variant 1 transcript_id : XM_001479322.1

name	LOC100042746 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149261676 GeneID:100042746
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 100 mRNAs, 2222 ESTs, 1 Protein product : similar to Glyceraldehyde-3-phosphate dehydrogenase (GAPDH), transcript variant 2 transcript_id : XM_001479331.1

name	LOC382492 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149261625 GeneID:382492
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 697 ESTs, 9 Proteins product : similar to ribosomal protein S17 transcript_id : XM_980426.2

name	Sertad2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:84490404 GeneID:58172 MGI:1931026
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : SERTA domain containing 2 transcript_id : NM_021372.2

name	Sertad2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:84490402 GeneID:58172 MGI:1931026
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : SERTA domain containing 2 transcript_id : NM_001038625.1

name	Aftph (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31340973 GeneID:216549 MGI:1923012
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : aftiphilin transcript_id : NM_181411.2

name	1110067D22Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142385345 GeneID:216551 MGI:1916114
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 1110067D22 gene transcript_id : NM_173752.2

name	LOC100042035 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149261630 GeneID:100042035
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 12 ESTs, 3 Proteins product : similar to ribosomal protein L12 transcript_id : XM_001477441.1

name	Peli1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:114158716 GeneID:67245 MGI:1914495
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : pellino 1 transcript_id : NM_023324.2

name	Vps54 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142375345 GeneID:245944 MGI:2178798
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : vacuolar protein sorting 54 (yeast) transcript_id : NM_139061.3

name	Ugp2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142365513 GeneID:216558 MGI:2183447
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : UDP-glucose pyrophosphorylase 2 transcript_id : NM_139297.3

name	4932414J04Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149261594 GeneID:237694 MGI:3605619
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 4932414J04 gene transcript_id : XM_001471843.1

name	Mdh1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31982177 GeneID:17449 MGI:97051
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : malate dehydrogenase 1, NAD (soluble) transcript_id : NM_008618.2

name	AV249152 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142385577 GeneID:216560 MGI:2144467
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : expressed sequence AV249152 transcript_id : NM_145425.3

name	LOC100042708 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149261673 GeneID:100042708
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001479316.1

name	LOC100041937 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149261624 GeneID:100041937
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001477284.1

name	Spred2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:15743556 CCDS:CCDS24454.1 GeneID:114716 MGI:2150019
definition	GO_component : GO:0031410 - cytoplasmic vesicle [Evidence IDA]; GO:0016020 - membrane [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IDA] GO_function : GO:0005515 - protein binding [Evidence IPI]; GO:0005173 - stem cell factor receptor binding [Evidence IPI] GO_process : GO:0007275 - development [Evidence IEA]; GO:0000188 - inactivation of MAPK activity [Evidence IMP]; GO:0009966 - regulation of signal transduction [Evidence IEA] codon_start : 1 note : sprouty protein with EVH-1 domain 2, related sequence product : sprouty-related protein with EVH-1 domain 2 protein_id : NP_277058.1

name	Actr2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:22122825 CCDS:CCDS24455.1 GeneID:66713 MGI:1913963
definition	GO_function : GO:0005515 - protein binding [Evidence IEA] codon_start : 1 product : actin-related protein 2 protein_id : NP_666355.1

name	Rab1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6679587 GeneID:19324 MGI:97842
definition	GO_component : GO:0000178 - exosome (RNase complex) [Evidence IEA]; GO:0005794 - Golgi apparatus [Evidence IDA]; GO:0005622 - intracellular [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0000166 - nucleotide binding [Evidence IEA] GO_process : GO:0006888 - ER to Golgi vesicle-mediated transport [Evidence ISS] [Evidence IEA]; GO:0006886 - intracellular protein transport [Evidence TAS]; GO:0007046 - ribosome biogenesis [Evidence IEA]; GO:0006364 - rRNA processing [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : ras-related YPT1 protein product : RAB1, member RAS oncogene family protein_id : NP_033022.1

name	Cep68 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:110625968 CCDS:CCDS24456.1 GeneID:216543 MGI:2667663
definition	codon_start : 1 product : centrosomal protein 68 protein_id : NP_758464.2

name	Slc1a4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31980935 CCDS:CCDS24457.1 GeneID:55963 MGI:2135601
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0015175 - neutral amino acid transporter activity [Evidence IDA]; GO:0017153 - sodium:dicarboxylate symporter activity [Evidence IEA]; GO:0015293 - symporter activity [Evidence IEA] GO_process : GO:0006835 - dicarboxylic acid transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 exception : mismatches in translation note : neutral amino acid transporter product : solute carrier family 1 (glutamate/neutral amino acid transporter), member 4 protein_id : NP_061349.2

name	LOC100042746 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149261677 GeneID:100042746
definition	codon_start : 1 product : similar to Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) isoform 2 protein_id : XP_001479381.1

name	LOC100042746 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149261675 GeneID:100042746
definition	codon_start : 1 product : similar to Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) isoform 1 protein_id : XP_001479372.1

name	LOC382492 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149261626 GeneID:382492
definition	codon_start : 1 product : similar to ribosomal protein S17 protein_id : XP_985520.2

name	Sertad2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:84490403 CCDS:CCDS24458.1 GeneID:58172 MGI:1931026
definition	GO_component : GO:0005634 - nucleus [Evidence ISS] GO_function : GO:0005515 - protein binding [Evidence IPI]; GO:0003713 - transcription coactivator activity [Evidence IDA]; GO:0016563 - transcriptional activator activity [Evidence IDA] GO_process : GO:0051301 - cell division [Evidence IEA]; GO:0030308 - negative regulation of cell growth [Evidence ISS]; GO:0045941 - positive regulation of transcription [Evidence IDA]; GO:0045893 - positive regulation of transcription, DNA-dependent [Evidence IDA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : PHD zinc finger- and bromodomain-interacting protein 2 product : transcriptional regulator interacting with the PHD-bromodomain 2 protein_id : NP_001033714.1

name	Sertad2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:84490405 CCDS:CCDS24458.1 GeneID:58172 MGI:1931026
definition	GO_component : GO:0005634 - nucleus [Evidence ISS] GO_function : GO:0005515 - protein binding [Evidence IPI]; GO:0003713 - transcription coactivator activity [Evidence IDA]; GO:0016563 - transcriptional activator activity [Evidence IDA] GO_process : GO:0051301 - cell division [Evidence IEA]; GO:0030308 - negative regulation of cell growth [Evidence ISS]; GO:0045941 - positive regulation of transcription [Evidence IDA]; GO:0045893 - positive regulation of transcription, DNA-dependent [Evidence IDA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : PHD zinc finger- and bromodomain-interacting protein 2 product : transcriptional regulator interacting with the PHD-bromodomain 2 protein_id : NP_067347.2

name	Aftph (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31088896 CCDS:CCDS24459.1 GeneID:216549 MGI:1923012
definition	GO_process : GO:0015031 - protein transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 product : aftiphilin protein protein_id : NP_852076.1

name	1110067D22Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:29611654 CCDS:CCDS24461.1 GeneID:216551 MGI:1916114
definition	codon_start : 1 product : hypothetical protein LOC216551 protein_id : NP_776113.1

name	LOC100042035 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149261631 GeneID:100042035
definition	codon_start : 1 product : similar to ribosomal protein L12 protein_id : XP_001477491.1

name	Peli1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:114158717 CCDS:CCDS24462.1 GeneID:67245 MGI:1914495
definition	codon_start : 1 product : pellino 1 protein_id : NP_075813.2

name	Vps54 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:45237183 CCDS:CCDS24463.1 GeneID:245944 MGI:2178798
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0003674 - molecular_function [Evidence ND]; GO:0005515 - protein binding [Evidence IEA] GO_process : GO:0008150 - biological_process [Evidence ND]; GO:0015031 - protein transport [Evidence IEA]; GO:0042147 - retrograde transport, endosome to Golgi [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 exception : mismatches in translation note : VPS54-like; wobbler product : vacuolar protein sorting 54 protein_id : NP_620692.2

name	Ugp2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21314832 CCDS:CCDS24464.1 GeneID:216558 MGI:2183447
definition	GO_function : GO:0016301 - kinase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]; GO:0003983 - UTP:glucose-1-phosphate uridylyltransferase activity [Evidence IEA] codon_start : 1 note : uridindiphosphoglucosepyrophosphorylase 2 product : UDP-glucose pyrophosphorylase 2 protein_id : NP_647458.1

name	4932414J04Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149261595 GeneID:237694 MGI:3605619
definition	codon_start : 1 product : hypothetical protein LOC237694 protein_id : XP_001471893.1

name	Mdh1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31982178 CCDS:CCDS24466.1 GeneID:17449 MGI:97051
definition	GO_component : GO:0005829 - cytosol [Evidence ISS] GO_function : GO:0004459 - L-lactate dehydrogenase activity [Evidence IEA]; GO:0030060 - L-malate dehydrogenase activity [Evidence IEA]; GO:0016615 - malate dehydrogenase activity [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA] GO_process : GO:0006096 - glycolysis [Evidence IEA]; GO:0006108 - malate metabolism [Evidence IEA]; GO:0006099 - tricarboxylic acid cycle [Evidence IEA]; GO:0006100 - tricarboxylic acid cycle intermediate metabolism [Evidence IEA] codon_start : 1 exception : mismatches in translation note : malate dehydrogenase, soluble product : malate dehydrogenase 1, NAD (soluble) protein_id : NP_032644.2

name	AV249152 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31981772 CCDS:CCDS24467.1 GeneID:216560 MGI:2144467
definition	codon_start : 1 note : homoloc-13 product : hypothetical protein LOC216560 protein_id : NP_663400.2

name	(CDS detail)
type	TATA_signal
link
xref
definition	note : putative

name	LOC665868 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:665868
definition	number : 1 pseudo : _no_value

name	LOC665868 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:665868
definition	number : 2 pseudo : _no_value

name	LOC665868 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:665868
definition	number : 3 pseudo : _no_value

name	LOC665868 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:665868
definition	number : 4 pseudo : _no_value

name	LOC100042081 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100042081
definition	number : 1 pseudo : _no_value

name	Glns-ps1 (CDS detail)
type	polyA_signal
link	vega ensembl
xref
definition	note : putative

name	LOC665953 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149261627 GeneID:665953
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs, 1 Protein product : similar to ribosomal protein L15 pseudo : _no_value transcript_id : XR_033194.1

clone name	MSMg01-046G13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-504J07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-436G11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-351I24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-460H17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-450L24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-169G11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-169F11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-423C23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-333E22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-362D09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-415P07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-298G15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-372F03
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-294A06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-099C22
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-279E16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-402G22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-122J02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-490H11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-269B02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-060H08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-539I23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-185J04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-479B12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-508O21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-341E22
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-187F08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-525K08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-213H21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-208D04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-420L08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-128P23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-122A23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-110C18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-381F12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-062E08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-425E19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-507J02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-333P24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-409L12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-349M04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-434N02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-525M14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-430C03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-339L01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-045B05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-409K19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-335P07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-487B04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-135L18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-055D12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-270J06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-356F23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-475M16
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-353I17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-176F24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-481I14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-489J17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-153B11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-477P16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-271J06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-384B13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-235P23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-371O06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-076C17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-112F14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-072P08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-441K01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-372H12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-271E06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-213G05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-363L13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-331K24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-109B16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-544O23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-331K23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-324H07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-131K12
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-066H15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-333K10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-416P09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-308A14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-454M20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-536I08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-444I05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-098H10
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-177O07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-479H23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-463K17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-059P04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-145C16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-408P16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-425H23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-099B07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-158I20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-019D08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-294L11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-311D23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-195H18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-045G06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-217E03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-091M18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-202F16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-333J12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-263M22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-101G14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-103N02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-010A09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-226O11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-203H21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-290M03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-196K15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-207D24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-236J01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-242A01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-120H17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-008I12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-154H15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-182O17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-255A02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-029C19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-213C22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-078I07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-101E24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-107P24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-067P02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-150E24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-022A12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-149J14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-229I02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-169G19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-350H09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-177D20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-076L13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-050E17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-103C14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-043O07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-079G07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-288D22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-073H04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-202B17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-236E01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-069N03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-193E04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-224I22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-184E06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-333H23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-253I03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-226P01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-016P11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-224L14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-193P18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-205G16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-124O19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-319M02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-292G09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-037N18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-291B14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-322H11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-109M23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-144D22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-117O13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-077E03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-261G05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-254P20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-026E10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-242K15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-150P09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-199M09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-082I08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-167I24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-112F12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-184E10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-220O03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-056N10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-125M01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-337D07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-280B20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-306I10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-346P11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-204L18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-099J04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-061G08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-255P13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-204L11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-185P18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-088P05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-221N20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-194P10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-276F16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-284J23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-207A11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-140F07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-039B22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-265K22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-303I16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-179J02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-036M19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-327F17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-103F16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-070E14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-027C01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-226B10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-347C07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-105N05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-038G02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-071E07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-316J17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-108J06
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-333H23.b	B6Ng01-333H23.g
ACC	GA119282	GA119283
length	571	1,161
definition	B6Ng01-333H23.b	B6Ng01-333H23.g
singlet/doublet	doublet	doublet
BLAST hit	unique	unique
Map location.	(20,599,282 - 20,599,830)	(20,444,306 - 20,445,457)
sequence	gaattcagtgcattatttcataaatctcccaaggtatggttgtgcatgct atgatcacactcggaggattgaagaggaggagtgtgaatttaaaaaccag cctgtctttacatagtttaaggccagcctgagcaactgaataagactctg cctcagaatgaaaaagaaaaaaaaaaatgtgatttcatgtaatttctaag tcagagaacttgactagaataaatacctgacctgttgtggggcatatacc tacatctattgaatagcctcaagcatgaggaccacaggtttgaaactgtc gtgagaaggttagcaggaccttgtctcaaaaatatattaattaggctaga ggtatggctcagtgggttaaaaatacttgcctgtgtgcaggcatctagac ctaagtttgaatctcccacactcaaataaaaagggtatgtcattctgaag ttgtaaccccagttctctgcaggacagaggctggaggatcctgggccttg cactctccctctccctctccctctccctctccctctccctctccctctca cacacacacacacacacacac	gaattcagtattaaaggttctgaagtctaaacctgttggaagagagcagg tgagaagggactccagcatggtatgtccacttcggttttctcttgctcta gggaggcattgcaacgcagaattctgtcttcgtctttatgcacagaacag cttagaggttgtttctttgggtatacaaattttgtgttcttgactactct ttaagcaacattattctacagaatttcttcagtttttaatttggtttctc catcttaaatgcctccggactacgaatacccaccactacctgtgtcacga gagtcttgctgtatggatctttagtatttattttgaggtgaaagaatgat aagaaatggttactccgagttggcttccagggttgctgtttagaattcat tagttttaagtcgctattaccctcttgaaatggagttctgcagtagttgt ccacaagatttaaattaggccaaaccaaacatattttgaaatattaaagt acagcaaagacctcttagtagttcattttctacttctctttcagactaac cagaataagttgttactaaatttaattttaaagaatagactgttcctgta ctgaaatctgccaagttgctacagaaagatttctttttaaagagcagaaa tgtggttatgatcagtccaaagtggtgaagtttaaaagtgacttatatgt aaatgttgctttaaagaagcacttgtcaccagcttcaagacctttcagta tatttcaggaagacctacacagagcctttttgagttgtttaataaatttg catgtgacttttttcatgaggctgaagcctcagagcacagggcatcctgc tgtctgaatttgaattttgccagtatctttccctcactgggctctgtgac cttggacaagtttaaaataatctggaccgtagtggttttctccagttgtt tctccagaaaggctcctctttaaaagacctctcctccctcaaagatgaat agaatgctcgcatcactgctggaagacagtattctgcatagacttcggag tgaagttcacagggctgagaagattgctcaagttggtggttcatttgttc tatatcttgacctcaaatccaagtatcccacaaaaatgtggcaagccttc ctgtatgtcag
quality values	Open. Hide. 49 31 33 28 62 39 31 54 54 54 54 56 54 62 62 54 62 62 37 31 62 62 62 62 62 62 62 59 59 59 35 29 38 62 43 62 59 62 59 62 54 62 59 59 62 62 62 62 62 59 62 62 62 59 59 59 62 62 59 62 62 62 62 62 59 59 62 59 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 54 62 62 59 62 62 54 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 59 62 62 59 62 62 62 62 62 59 62 54 62 62 62 62 62 62 49 62 59 62 62 62 62 62 54 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 50 62 48 42 62 62 62 62 62 59 62 62 59 59 54 49 49 62 62 62 62 62 62 49 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 49 49 49 49 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 54 54 62 62 62 62 59 62 62 62 62 59 59 59 56 59 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 59 62 62 59 62 62 62 59 62 59 62 62 62 62 59 62 59 62 62 49 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 59 62 62 59 59 62 49 56 62 51 43 45 32 45 30 30 34 27 28 45 62 31 22 11 19 21 22 32 24 10 24 15 19 10 22 8 11 10 30 17 22 22 32 14 32 16 22 22 32 16 16 15 16 11 22 18 20	Open. Hide. 62 44 51 47 62 47 59 59 59 59 59 46 50 56 43 38 54 59 62 62 62 62 62 62 62 62 62 59 62 62 62 54 62 62 62 62 62 62 62 62 62 54 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 59 62 62 62 62 62 62 59 62 62 62 62 62 54 62 59 62 62 62 62 62 54 49 54 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 42 54 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 42 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 59 62 62 62 62 54 49 54 62 62 62 62 62 62 62 62 62 54 62 54 54 54 62 59 62 62 51 54 49 62 62 62 54 49 49 54 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 54 62 62 54 62 28 43 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 58 54 58 58 58 58 58 54 54 43 58 58 58 58 58 58 58 58 58 58 58 58 54 54 54 58 58 58 54 54 48 52 58 58 58 54 58 58 58 58 58 52 52 58 54 46 58 54 58 43 47 58 58 58 52 58 58 58 58 58 58 54 54 52 58 54 54 58 54 48 58 51 51 51 38 58 58 50 49 58 58 54 58 42 41 58 51 58 49 58 58 46 45 51 50 51 58 53 47 49 58 58 58 58 50 51 51 51 54 44 48 50 49 51 51 58 58 51 51 46 50 50 39 58 44 49 50 37 31 58 46 47 58 58 58 58 25 40 58 58 51 58 50 50 51 31 58 38 40 49 58 33 54 44 39 50 52 47 58 47 52 42 40 52 49 37 22 27 51 53 53 39 51 49 52 53 53 51 39 58 58 39 54 54 54 38 32 46 54 49 36 49 51 54 53 42 53 54 52 50 49 44 47 54 45 35 49 44 49 54 39 30 49 50 52 54 51 34 42 30 39 52 49 47 52 45 35 31 26 33 37 35 44 45 25 11 38 37 46 24 39 40 54 46 40 42 39 37 36 45 37 53 54 38 36 37 17 32 35 41 32 31 14 40 33 40 40 28 41 32 31 32 21 27 30 32 52 49 52 32 32 53 29 33 31 53 31 52 29 23 41 36 31 49 31 31 51 33 27 30 22 31 45 31 40 32 23 43 45 47 47 47 34 27 26 30 36 38 26 38 18 40 31 45 36 24 32 30 32 33 29 23 37 13 30 28 25 20 8 46 36 16 31 43 29 31 31 43 32 34 37 31 30 30 31 26 27 21 46 46 26 31 31 34 48 46 16 31 26 32 30 32 26 27 21 26 32 46 32 20 33 25 12 18 19 27 20 13 46 21 24 36 28 27 27 26 26 31 23 21 19 25 30 29 37 21 27 42 21 35 44 13 12 43 44 31 31 21 21 28 29 29 31 25 28 27 21 26 13 31 11 13 26 22 29 48 44 16 15 15 21 26 31 27 23 23 31 26 48 17 17 21 14 29 21 24 33 39 18 24 13 14 32 14 19 22 19 20 39 22 23 39 43 18 9 32 14 19 23 32 9 8 13 14 17 29 15 5 22 14 43 24 16 14 17 20 32 18 23 19 24 28 28 20 28 8 17 21 6 11 6 23 17 15 18 18 17 16 28 13 21 21 9 13 21 11 7 25 10 6 6 11 6 14 26 13 5 5 10 6 8 8 29 13 5 4 5 10 6 8 5 12 21 12 11 13 24 6 6 5 19 11 15 4 5 8 14 4 6 8 4 7 7 13 18 5 6 10 7 7 17 7 7 18 14 7 5 4 6 4 8 4 8 16 17 7 21 8 16 5 12 6 4 6 4 4 4 5 12 6 7 11 5 9 15 12 17 6 6 4 7 4 4 11 6 19 12 7 7 8 5 20 30 30 16 6 10 6 4 8 4 4 5 5 13 8 2 4 4 6 4 7 6 5 1 2 2 5 10 3

Alignment Information

BAC End 1

BAC End 2

seq1: chr11_20599282_20599830
seq2: B6Ng01-333H23.b_50_598 (reverse)

seq1  GAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGTGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGTGC  50

seq1  AAGGCCCAGGATCCTCCAGCCTCTGTCCTGCAGAGAACTGGGGTTACAAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCCCAGGATCCTCCAGCCTCTGTCCTGCAGAGAACTGGGGTTACAAC  100

seq1  TTCAGAATGACATACCCTTTTTATTTGAGTGTGGGAGATTCAAACTTAGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGAATGACATACCCTTTTTATTTGAGTGTGGGAGATTCAAACTTAGG  150

seq1  TCTAGATGCCTGCACACAGGCAAGTATTTTTAACCCACTGAGCCATACCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGATGCCTGCACACAGGCAAGTATTTTTAACCCACTGAGCCATACCT  200

seq1  CTAGCCTAATTAATATATTTTTGAGACAAGGTCCTGCTAACCTTCTCACG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGCCTAATTAATATATTTTTGAGACAAGGTCCTGCTAACCTTCTCACG  250

seq1  ACAGTTTCAAACCTGTGGTCCTCATGCTTGAGGCTATTCAATAGATGTAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTTTCAAACCTGTGGTCCTCATGCTTGAGGCTATTCAATAGATGTAG  300

seq1  GTATATGCCCCACAACAGGTCAGGTATTTATTCTAGTCAAGTTCTCTGAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATATGCCCCACAACAGGTCAGGTATTTATTCTAGTCAAGTTCTCTGAC  350

seq1  TTAGAAATTACATGAAATCACATTTTTTTTTTTCTTTTTCATTCTGAGGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGAAATTACATGAAATCACATTTTTTTTTTTCTTTTTCATTCTGAGGC  400

seq1  AGAGTCTTATTCAGTTGCTCAGGCTGGCCTTAAACTATGTAAAGACAGGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTCTTATTCAGTTGCTCAGGCTGGCCTTAAACTATGTAAAGACAGGC  450

seq1  TGGTTTTTAAATTCACACTCCTCCTCTTCAATCCTCCGAGTGTGATCATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTTTTAAATTCACACTCCTCCTCTTCAATCCTCCGAGTGTGATCATA  500

seq1  GCATGCACAACCATACCTTGGGAGATTTATGAAATAATGCACTGAATTC  549
      |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGCACAACCATACCTTGGGAGATTTATGAAATAATGCACTGAATTC  549

seq1: chr11_20444306_20445457
seq2: B6Ng01-333H23.g_67_1227

seq1  GAATTCAGTATTAAAGGTTCTGAAGTCTAAACCTGTTGGAAGAGAGCAGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTATTAAAGGTTCTGAAGTCTAAACCTGTTGGAAGAGAGCAGG  50

seq1  TGAGAAGGGACTCCAGCATGGTATGTCCACTTCGGTTTTCTCTTGCTCTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAAGGGACTCCAGCATGGTATGTCCACTTCGGTTTTCTCTTGCTCTA  100

seq1  GGGAGGCATTGCAACGCAGAATTCTGTCTTCGTCTTTATGCACAGAACAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGGCATTGCAACGCAGAATTCTGTCTTCGTCTTTATGCACAGAACAG  150

seq1  CTTAGAGGTTGTTTCTTTGGGTATACAAATTTTGTGTTCTTGACTACTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGAGGTTGTTTCTTTGGGTATACAAATTTTGTGTTCTTGACTACTCT  200

seq1  TTAAGCAACATTATTCTACAGAATTTCTTCAGTTTTTAATTTGGTTTCTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGCAACATTATTCTACAGAATTTCTTCAGTTTTTAATTTGGTTTCTC  250

seq1  CATCTTAAATGCCTCCGGACTACGAATACCCACCACTACCTGTGTCACGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTTAAATGCCTCCGGACTACGAATACCCACCACTACCTGTGTCACGA  300

seq1  GAGTCTTGCTGTATGGATCTTTAGTATTTATTTTGAGGTGAAAGAATGAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTCTTGCTGTATGGATCTTTAGTATTTATTTTGAGGTGAAAGAATGAT  350

seq1  AAGAAATGGTTACTCCGAGTTGGCTTCCAGGGTTGCTGTTTAGAATTCAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAATGGTTACTCCGAGTTGGCTTCCAGGGTTGCTGTTTAGAATTCAT  400

seq1  TAGTTTTAAGTCGCTATTACCCTCTTGAAATGGAGTTCTGCAGTAGTTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTTTAAGTCGCTATTACCCTCTTGAAATGGAGTTCTGCAGTAGTTGT  450

seq1  CCACAAGATTTAAATTAGGCCAAACCAAACATATTTTGAAATATTAAAGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACAAGATTTAAATTAGGCCAAACCAAACATATTTTGAAATATTAAAGT  500

seq1  ACAGCAAAGACCTCTTAGTAGTTCATTTTCTACTTCTCTTTCAGACTAAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCAAAGACCTCTTAGTAGTTCATTTTCTACTTCTCTTTCAGACTAAC  550

seq1  CAGAATAAGTTGTTACTAAATTTAATTTTAAAGAATAGACTGTTCCTGTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAATAAGTTGTTACTAAATTTAATTTTAAAGAATAGACTGTTCCTGTA  600

seq1  CTGAAATCTGCCAAGTTGCTACAGAAAGATTTCTTTTTAAAGAGCAGAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAATCTGCCAAGTTGCTACAGAAAGATTTCTTTTTAAAGAGCAGAAA  650

seq1  TGTGGTTATGATCAGTCCAAAGTGGTGAAGTTTAAAAGTGACTTATATGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGTTATGATCAGTCCAAAGTGGTGAAGTTTAAAAGTGACTTATATGT  700

seq1  AAATGTTGCTTTAAAGAAGCACTTGTCACCAGCTTCAAGACCTTTCAGTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGTTGCTTTAAAGAAGCACTTGTCACCAGCTTCAAGACCTTTCAGTA  750

seq1  TATTTCAGGAAGACCTACACAGAGCCTTTTTGAGTTGTTTAATAAATTTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTCAGGAAGACCTACACAGAGCCTTTTTGAGTTGTTTAATAAATTTG  800

seq1  CATGTGACTTTTTTCATGAGGCTGAAGCCTCAGAGCACAGGGCATCCTGC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTGACTTTTTTCATGAGGCTGAAGCCTCAGAGCACAGGGCATCCTGC  850

seq1  TGTCTGAATTTGAATTTTGCCAGTATCTTTCCCTCACT-GGCTCTGTGAC  899
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  TGTCTGAATTTGAATTTTGCCAGTATCTTTCCCTCACTGGGCTCTGTGAC  900

seq1  CTTGGACAAGTTTAAAATAATCTGGACCGTAGTGGTTTTCTCCAGTTGTT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGACAAGTTTAAAATAATCTGGACCGTAGTGGTTTTCTCCAGTTGTT  950

seq1  TCTCCAGAAAGGCTCCTCTTTAAAAGACCTCCCCTCCCCCAAAGATGAAT  999
      ||||||||||||||||||||||||||||||| |||||| |||||||||||
seq2  TCTCCAGAAAGGCTCCTCTTTAAAAGACCTCTCCTCCCTCAAAGATGAAT  1000

seq1  AGAATGCTCGCCATCACTGCTGGAAGACAGGTATCTGCATAGACTTTCAG  1049
      |||||||||| |||||||||||||||||||   ||||||||||| ||| |
seq2  AGAATGCTCG-CATCACTGCTGGAAGACAGTATTCTGCATAGAC-TTCGG  1048

seq1  AGTGAAG-TCACAGGGGCTGAAGAGATTGCTC-AGTTGGTTGTCCATTT-  1096
      ||||||| ||||| |||||||  ||||||||| ||||||| || ||||| 
seq2  AGTGAAGTTCACA-GGGCTGAGAAGATTGCTCAAGTTGGTGGTTCATTTG  1097

seq1  -------TC-TGAACTCAGATTCTCAGTA-CCCACAAAAATGTGGC-AGC  1136
             || ||| |||| | ||  |||| |||||||||||||||| |||
seq2  TTCTATATCTTGACCTCA-AATCCAAGTATCCCACAAAAATGTGGCAAGC  1146

seq1  CTTCCTGTAATGTCAG  1152
      |||||||| |||||||
seq2  CTTCCTGT-ATGTCAG  1161

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information