BAC Information

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BAC

Clone NameB6Ng01-334K15
Chromosome11 (Build37)
Map Location 121,467,312 - 121,657,974
singlet/doubletdoublet
Overlap geneTbcd, B3gntl1, Metrnl
Upstream geneAnapc11, Npb, Pcyt2, Sirt7, Mafg, Pycr1, 1110012N22Rik, 5730593N15Rik, Aspscr1, Stra13, Lrrc45, Rac3, Dcxr, Cbr2, Hmga1-rs1, LOC667778, Rfng, Gps1, Dus1l, Fasn, Ccdc57, LOC100043454, Slc16a3, Csnk1d, Cd7, Sectm1b, Sectm1a, LOC637008, 4921530G04Rik, Tex19, Uts2r, 1110031I02Rik, Hexdc, BC017643, Narf, Foxk2, Wdr45l, Rab40b, BC032265, Fn3k, Zfp750
Downstream genePtchd3, LOC667879, LOC674842
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-334K15.bB6Ng01-334K15.g
ACCGA120115GA120116
length1,044867
definitionB6Ng01-334K15.b B6Ng01-334K15.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(121,656,929 - 121,657,974)(121,467,312 - 121,468,169)
sequence
gaattcacatccatcattagtgttcagaggaatatgccatcatgccacca
agctcacatcttttctcggggtctgtcaatagaaccagactttcttttct
gagattaggttctcagagtggacaagtgtgtctggtcctttgtccaaagt
ctccattgactctgtggcatgaagccatcctccccaagttacccaggtag
atgccttgaaggtctttggcttcagcctcatcccactgatcctaaagtac
ctatccaatggcactgtccacagagaggcaggcactaaatcaggaacatg
aggacaggccttacccaggaatgaggttaatgcaagagcttataatctac
aagtgtcactctcactatgtggctgtgtcctaatctatttactgttccca
ctagggtgacctttggtcttatgggtgggcccccacccccagcatcttgg
tccttcctcttatattgggtgtggacagtgaaaccagagtttcctccttt
gactcacatagctctactttaccatctgcagaacggcctccattgaaggt
tgccatttgagttgcttgtatggctcatggattggagttgatgggagggc
aggaaacgatgagctcagcctttgacagggaggctgtggttagagaagac
agatggtcagtgagcaatactgtggggttgagggtgaacaactccctccg
ttctttcatagatggtcaggagagaaggaatcatgaacaacaggacagat
ggactttagaaagacaggaagacagatgtgtgtgtcgatattctgtaaaa
atcagagaactgctgtggagtgaatgaaaacatgggatttgtcctactaa
tattagtcatgtgactatgaacacatatccagacccagtttcctgatttt
ctgagtgatctatttatacagtgctatagtaaacacaaacaaccttcttt
aggtgatctacagtcacttaaggggccaagcttattctcattattcccca
tccatatactgcacatccatgggcaaaggcactgattcataggg
gaattctctcttgatttggacagctttgtatttcatgaagatgtgtgagc
atctactgttgcttagaaactccctggtggttttggatcttgctttatac
tgactggtggattcagatcaagaggatctcagttgatgtcctccctctct
gagtctttgcccactccagtttgccccattaagaggatctatgcctagtt
ttcataggatcttgtatggggttttggtgtggttttctcccttgatcttg
agcctcgtctttgtgcttactgctgaccagcattcaggtgaagccctaag
gccaggcgctccactgtctctgcgctctgccttgagatcctgcatgcatc
acacacccagggctgctggaggggaccagcttgctttgcttgaagtctgt
agtgtctttgttgtttaactgtctgtctttgctggatgctgaagatggcg
tttcacctgacactacagggctccctctgacactgtgtagcactgccttt
ctaaaaccttcccgggtagcttgaacactcacaggggcatggcccggcta
ggatgctcttctccacaccgatggattcatctaggaaaatgctctaagga
tttgacatctatttttctggcttaaaaatttcaaaataagatagtaggaa
aataatgatataaatgtttttacttctcttttttgttctttatggatttt
gaattttggcacatacaaatgtagggctgcctcaaatatcaaatgatgat
gtttttggaggtgtttctgcttacattctttggctttttttgttgttttt
tttttttttttttctctctctctctgggcagtgtttttaaatttttaata
atggtttgggtttgttc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_121656929_121657974
seq2: B6Ng01-334K15.b_46_1089 (reverse)

seq1  CCCTATGGATCAGTGCCTTTGCCCACTGATGTGCAGTATATGGATGGGGA  50
      ||||||| |||||||||||||||||  |||||||||||||||||||||||
seq2  CCCTATGAATCAGTGCCTTTGCCCATGGATGTGCAGTATATGGATGGGGA  50

seq1  ATAATGAGAATAAGCTTTGGCCCCTTAAGTGACTGTAGATCACCTAAAGA  100
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  ATAATGAGAATAAGC-TTGGCCCCTTAAGTGACTGTAGATCACCTAAAGA  99

seq1  AGGTTGTTTTGTGTTTACTATAGCACTGTATAAATAGATCACTCAGAAAA  150
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTG-TTTGTGTTTACTATAGCACTGTATAAATAGATCACTCAGAAAA  148

seq1  TCAGGAAACTGGGGTCTGGATATGTGTTCATAGTCACATGACTAATATTA  200
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  TCAGGAAACT-GGGTCTGGATATGTGTTCATAGTCACATGACTAATATTA  197

seq1  GTAGGACAAATCCCATGTTTTCATTCACTCCACAGCAGTTCTCTGATTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGGACAAATCCCATGTTTTCATTCACTCCACAGCAGTTCTCTGATTTT  247

seq1  TACAGAATATCGACACACACATCTGTCTTCCTGTCTTTCTAAAGTCCATC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGAATATCGACACACACATCTGTCTTCCTGTCTTTCTAAAGTCCATC  297

seq1  TGTCCTGTTGTTCATGATTCCTTCTCTCCTGACCATCTATG-AAGAACGG  349
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  TGTCCTGTTGTTCATGATTCCTTCTCTCCTGACCATCTATGAAAGAACGG  347

seq1  AGGGAGTTGTTCACCCTCAACCCCACAGTATTGCTCACTGACCATCTGTC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGAGTTGTTCACCCTCAACCCCACAGTATTGCTCACTGACCATCTGTC  397

seq1  TTCTCTAACCACAGCCTCCCTGTCAAAGGCTGAGCTCATCGTTTCCTGCC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTAACCACAGCCTCCCTGTCAAAGGCTGAGCTCATCGTTTCCTGCC  447

seq1  CTCCCATCAACTCCAATCCATGAGCCATACAAGCAACTCAAATGGCAACC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCATCAACTCCAATCCATGAGCCATACAAGCAACTCAAATGGCAACC  497

seq1  TTCAATGGAGGCCGTTCTGCAGATGGTAAAGTAGAGCTATGTGAGTCAAA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAATGGAGGCCGTTCTGCAGATGGTAAAGTAGAGCTATGTGAGTCAAA  547

seq1  GGAGGAAACTCTGGTTTCACTGTCCACACCCAATATAAGAGGAAGGACCA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGAAACTCTGGTTTCACTGTCCACACCCAATATAAGAGGAAGGACCA  597

seq1  AGATGCTGGGGGTGGGGGCCCACCCATAAGACCAAAGGTCACCCTAGTGG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGCTGGGGGTGGGGGCCCACCCATAAGACCAAAGGTCACCCTAGTGG  647

seq1  GAACAGTAAATAGATTAGGACACAGCCACATAGTGAGAGTGACACTTGTA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACAGTAAATAGATTAGGACACAGCCACATAGTGAGAGTGACACTTGTA  697

seq1  GATTATAAGCTCTTGCATTAACCTCATTCCTGGGTAAGGCCTGTCCTCAT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTATAAGCTCTTGCATTAACCTCATTCCTGGGTAAGGCCTGTCCTCAT  747

seq1  GTTCCTGATTTAGTGCCTGCCTCTCTGTGGACAGTGCCATTGGATAGGTA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCCTGATTTAGTGCCTGCCTCTCTGTGGACAGTGCCATTGGATAGGTA  797

seq1  CTTTAGGATCAGTGGGATGAGGCTGAAGCCAAAGACCTTCAAGGCATCTA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTAGGATCAGTGGGATGAGGCTGAAGCCAAAGACCTTCAAGGCATCTA  847

seq1  CCTGGGTAACTTGGGGAGGATGGCTTCATGCCACAGAGTCAATGGAGACT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGGTAACTTGGGGAGGATGGCTTCATGCCACAGAGTCAATGGAGACT  897

seq1  TTGGACAAAGGACCAGACACACTTGTCCACTCTGAGAACCTAATCTCAGA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGACAAAGGACCAGACACACTTGTCCACTCTGAGAACCTAATCTCAGA  947

seq1  AAAGAAAGTCTGGTTCTATTGACAGACCCCGAGAAAAGATGTGAGCTTGG  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAAAGTCTGGTTCTATTGACAGACCCCGAGAAAAGATGTGAGCTTGG  997

seq1  TGGCATGATGGCATATTCCTCTGAACACTAATGATGGATGTGAATTC  1046
      |||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCATGATGGCATATTCCTCTGAACACTAATGATGGATGTGAATTC  1044

seq1: chr11_121467312_121468169
seq2: B6Ng01-334K15.g_68_933

seq1  GAATTCTCTCTTGATTTGGACAGCTTTGTATTTCATGAAGATGTGTGAGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTCTTGATTTGGACAGCTTTGTATTTCATGAAGATGTGTGAGC  50

seq1  ATCTACTGTTGCTTAGAAACTCCCTGGTGGTTTTGGATCTTGCTTTATAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTACTGTTGCTTAGAAACTCCCTGGTGGTTTTGGATCTTGCTTTATAC  100

seq1  TGACTGGTGGATTCAGATCAAGAGGATCTCAGTTGATGTCCTCCCTCTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTGGTGGATTCAGATCAAGAGGATCTCAGTTGATGTCCTCCCTCTCT  150

seq1  GAGTCTTTGCCCACTCCAGTTTGCCCCATTAAGAGGATCTATGCCTAGTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTCTTTGCCCACTCCAGTTTGCCCCATTAAGAGGATCTATGCCTAGTT  200

seq1  TTCATAGGATCTTGTATGGGGTTTTGGTGTGGTTTTCTCCCTTGATCTTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATAGGATCTTGTATGGGGTTTTGGTGTGGTTTTCTCCCTTGATCTTG  250

seq1  AGCCTCGTCTTTGTGCTTACTGCTGACCAGCATTCAGGTGAAGCCCTAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTCGTCTTTGTGCTTACTGCTGACCAGCATTCAGGTGAAGCCCTAAG  300

seq1  GCCAGGCGCTCCACTGTCTCTGCGCTCTGCCTTGAGATCCTGCATGCATC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGGCGCTCCACTGTCTCTGCGCTCTGCCTTGAGATCCTGCATGCATC  350

seq1  ACACACCCAGGGCTGCTGGAGGGGACCAGCTTGCTTTGCTTGAAGTCTGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACCCAGGGCTGCTGGAGGGGACCAGCTTGCTTTGCTTGAAGTCTGT  400

seq1  AGTGTCTTTGTTGTTTAACTGTCTGTCTTTGCTGGATGCTGAAGATGGCG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTCTTTGTTGTTTAACTGTCTGTCTTTGCTGGATGCTGAAGATGGCG  450

seq1  TTTCACCTGACACTACAGGGCTCCCTCTGACACTGTGTAGCACTGCCTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCACCTGACACTACAGGGCTCCCTCTGACACTGTGTAGCACTGCCTTT  500

seq1  CTAAAACCTTCCCGGGTAGCTTGAACACTCACAGGGGCATGGCCCGGCTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAAACCTTCCCGGGTAGCTTGAACACTCACAGGGGCATGGCCCGGCTA  550

seq1  GGATGCTCTTCTCCACACCGATGGATTCATCTAGGAAAATGCTCTAAGGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGCTCTTCTCCACACCGATGGATTCATCTAGGAAAATGCTCTAAGGA  600

seq1  TTTGACATCTATTTTTCTGGCTTAAAAATTTCAAAATAAGATAGTAGGAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGACATCTATTTTTCTGGCTTAAAAATTTCAAAATAAGATAGTAGGAA  650

seq1  AATAATGATATAAATGTTTTTACTTCTCTTTTTTGTTCTTTATGGATTTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAATGATATAAATGTTTTTACTTCTCTTTTTTGTTCTTTATGGATTTT  700

seq1  GAATTTTGGCACATACAAATGTAGGGCTGCCTCAAATATCAAATGATGAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTTTGGCACATACAAATGTAGGGCTGCCTCAAATATCAAATGATGAT  750

seq1  GTTTTTGGAGGTGTTTCTGCTTACATTCTTTGGCTTTTTTTGTTGTTTTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTTGGAGGTGTTTCTGCTTACATTCTTTGGCTTTTTTTGTTGTTTTT  800

seq1  TTTTTTTTTTTT----TTTTTTTTTTGGTAGTGTTTT--AATTTTTATTA  844
      ||||||||||||    | | | | | || ||||||||  |||||||| ||
seq2  TTTTTTTTTTTTTCTCTCTCTCTCTGGGCAGTGTTTTTAAATTTTTAATA  850

seq1  --TGTTTGGGTTTGTT  858
         |||||||||||||
seq2  ATGGTTTGGGTTTGTT  866