BAC Information

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BAC

Clone NameB6Ng01-338L07
Chromosome11 (Build37)
Map Location 106,458,191 - 106,458,984
singlet/doubletsinglet
Overlap geneTex2
Upstream geneTanc2, LOC667737, Cyb561, Ace, EG217246, Kcnh6, Wdr68, Ccdc44, Map3k3, Limd2, 2610019A05Rik, 2610204L23Rik, Ddx42, Ftsj3, Psmc5, Smarcd2, Tcam1, Gh, Cd79b, Scn4a, 2310007L24Rik, Icam2, Ern1, LOC100041277
Downstream genePecam1, Gm885, Polg2, Ddx5, Ccdc45, Smurf2, LOC666873, Kpna2, 1810010H24Rik, Bptf, LOC100042899, Nol11, LOC671692, Pitpnc1, Psmd12, A830035A12Rik, Helz
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-338L07.bB6Ng01-338L07.g
ACCGA122917GA122918
length799490
definitionB6Ng01-338L07.b B6Ng01-338L07.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccaggacagccagggctatatatgcccatcccagccaaccccccc
aaaaaaccactcgatgtaaagaatttattacatttttttgttgttgttgc
tgttgtttgttcatttgtttgagacagggtctcactgtgtagcccagctg
ggctcatgtagaccaggctggccgtcaacccacttccctctcaagtcatt
atatactttgactaacataggtaagtaaaactttgatggcgtccttccag
gtagtgttttttgttttttttttaaagatttatttatttattatatgtaa
gtacactgtagctgtcttcagacactccagatcagatctcgttacagatg
gttatgagccaccatgtggttgctgggatttgaactccggaccttcggaa
gagcggtagggtgctcttacccactgagccaactcaccagccccaggtag
tggttttgtagtcctagaaatttggccaagatgcaaggtgctgggtgaag
cccccacccccagccccacccccaccccccagaagaggtcaccccactgt
tttaccaagtcagacaggaaaacagctcgttacttactagacataaaagt
ttaccaaaatattgaaaaagaaattgaaaatctgaaacataaggaagtat
tttcttaaattttaaaaagagaaaaaaaagagaaaatgaggggaaactgc
tatactgacttataagctattggtttgggagaaaataatctaacctttta
ataattaagaacctatcggggcttattgctcttccaagttctgaacact
tctcaaggttacaagcttttgttgtgcaaaccttattccttgatttaaaa
ctactggttaaataaaattgattgcagccaattactggagggattagagg
taggtgggttttttgagtgacctggttgtggggtggaggagcaaggggaa
gaggagaaaccttgaggtgggagaggagaaggcaccttgagaggagaggt
acggtgagcggtgagcacgtggccgggagaaacagcaggtatttggggag
cgccgctagggaggtagccagaccagcatatagaaaagtagacccttcag
taactgtcaaggcctaataaaagaaccatagcctgagtctcatttgtaag
ctagtcagggataaacataaattggttgtaccgcagtgtcacctgtttgt
aaccccgtgagcttgtgaagcagagacaggcaaatccctgggggttcact
agccagacaatgtatccaaaatggcaagcttagggttcag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_106458191_106458984
seq2: B6Ng01-338L07.b_51_849

seq1  GAATTCCAGGACAGCCAGGGCTATATATGCCCATCCCAGCCAACCCCCCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGGACAGCCAGGGCTATATATGCCCATCCCAGCCAACCCCCCC  50

seq1  AAAAAACCACTCGATGTAAAGAATTTATTACATTTTTTTGTTGTTGTTGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAACCACTCGATGTAAAGAATTTATTACATTTTTTTGTTGTTGTTGC  100

seq1  TGTTGTTTGTTCATTTGTTTGAGACAGGGTCTCACTGTGTAGCCCAGCTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGTTTGTTCATTTGTTTGAGACAGGGTCTCACTGTGTAGCCCAGCTG  150

seq1  GGCTCATGTAGACCAGGCTGGCCGTCAACCCACTTCCCTCTCAAGTCATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTCATGTAGACCAGGCTGGCCGTCAACCCACTTCCCTCTCAAGTCATT  200

seq1  ATATACTTTGACTAACATAGGTAAGTAAAACTTTGATGGCGTCCTTCCAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATACTTTGACTAACATAGGTAAGTAAAACTTTGATGGCGTCCTTCCAG  250

seq1  GTAGTGTTTTTTGTTTTTTTTTTAAAGATTTATTTATTTATTATATGTAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGTGTTTTTTGTTTTTTTTTTAAAGATTTATTTATTTATTATATGTAA  300

seq1  GTACACTGTAGCTGTCTTCAGACACTCCAGATCAGATCTCGTTACAGATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACACTGTAGCTGTCTTCAGACACTCCAGATCAGATCTCGTTACAGATG  350

seq1  GTTATGAGCCACCATGTGGTTGCTGGGATTTGAACTCCGGACCTTCGGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATGAGCCACCATGTGGTTGCTGGGATTTGAACTCCGGACCTTCGGAA  400

seq1  GAGCGGTAGGGTGCTCTTACCCACTGAGCCAACTCACCAGCCCCAGGTAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCGGTAGGGTGCTCTTACCCACTGAGCCAACTCACCAGCCCCAGGTAG  450

seq1  TGGTTTTGTAGTCCTAGAAATTTGGCCAAGATGCAAGGTGCTGGGTGAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTTTGTAGTCCTAGAAATTTGGCCAAGATGCAAGGTGCTGGGTGAAG  500

seq1  CCCCCACCCCCAGCCCCACCCCCACCCCCCAGAAGAGGTCACCCCACTGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCACCCCCAGCCCCACCCCCACCCCCCAGAAGAGGTCACCCCACTGT  550

seq1  TTTACCAAGTCAGACAGGAAAACAGCTCGTTACTTACTAGACATAAAAG-  599
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  TTTACCAAGTCAGACAGGAAAACAGCTCGTTACTTACTAGACATAAAAGT  600

seq1  TTACAAAAATATTGAAAAAGAAATTGAAAATCTGAAACATAAGGAAGTAT  649
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACCAAAATATTGAAAAAGAAATTGAAAATCTGAAACATAAGGAAGTAT  650

seq1  TTTCTTAAA-TTTAAAAAGAG-AAAAAAAGAGAAAATGA-GGGAAACTGC  696
      ||||||||| ||||||||||| ||||||||||||||||| ||||||||||
seq2  TTTCTTAAATTTTAAAAAGAGAAAAAAAAGAGAAAATGAGGGGAAACTGC  700

seq1  TATACTGACTTATAAGCTATTGGTTTGGGAGAAAATAATCTAACCATTTT  746
      ||||||||||||||||||||||||||||||||||||||||||||| ||| 
seq2  TATACTGACTTATAAGCTATTGGTTTGGGAGAAAATAATCTAACCTTTTA  750

seq1  ATAATTAAGAACCTATC-GGGCTTAGTGCTCTCCCAGGTACTGAACACT  794
      ||||||||||||||||| ||||||| |||||| ||| || |||||||||
seq2  ATAATTAAGAACCTATCGGGGCTTATTGCTCTTCCAAGTTCTGAACACT  799