MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-339I20
Chromosome	5 (Build37)	11 (Build37)
Map Location	44,258,080 - 44,258,621	97,591,082 - 97,591,328
singlet/doublet	singlet	singlet
Overlap gene	none
Upstream gene	LOC433883, EG665934, Cpeb2, C1qtnf7, 4833430A08Rik, 5730509K17Rik, Fbxl5, Bst1
Downstream gene	Cd38, EG665989, EG665994, LOC100040677, EG384179, Fgfbp1, Prom1, LOC100041413, Tapt1, LOC100040717, LOC545747, Ldb2, LOC100041481
Link	Open Mouse BAC browser

Click to get alignment info.

name	LOC433883 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:433883
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs, 12 Proteins pseudo : _no_value

name	EG665934 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:665934 MGI:3648234
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 ESTs

name	Cpeb2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:231207 MGI:2442640
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	C1qtnf7 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:109323 MGI:1925911
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	4833430A08Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:399596 MGI:3026998
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	5730509K17Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:231214 MGI:1924487
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Fbxl5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:242960 MGI:2152883
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Bst1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12182 MGI:105370
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cd38 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12494 MGI:107474
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG665989 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:665989 MGI:3645078
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 64 ESTs, 62 Proteins

name	EG665994 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:665994 MGI:3647603
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 Proteins pseudo : _no_value

name	LOC100040677 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040677
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	EG384179 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:384179 MGI:3645663
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 78 ESTs, 6 Proteins

name	Fgfbp1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14181 MGI:1096350
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Prom1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:19126 MGI:1100886
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100041413 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041413
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA

name	Tapt1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:231225 MGI:2683537
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100040717 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040717
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins pseudo : _no_value

name	LOC545747 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:545747
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 mRNAs, 71 ESTs, 94 Proteins pseudo : _no_value

name	Ldb2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:16826 MGI:894670
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	LOC100041481 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041481
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 5 ESTs

name	EG665934 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149253865 GeneID:665934 MGI:3648234
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 ESTs product : predicted gene, EG665934 transcript_id : XM_980404.2

name	Cpeb2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31341662 GeneID:231207 MGI:2442640
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cytoplasmic polyadenylation element binding protein 2 transcript_id : NM_175937.2

name	C1qtnf7 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:61098163 GeneID:109323 MGI:1925911
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : C1q and tumor necrosis factor related protein 7 transcript_id : NM_175425.3

name	4833430A08Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802347 GeneID:399596 MGI:3026998
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 4833430A08 gene transcript_id : NM_001033482.2

name	5730509K17Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:26986582 GeneID:231214 MGI:1924487
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 5730509K17 gene transcript_id : NM_172274.1

name	Fbxl5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142385003 GeneID:242960 MGI:2152883
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : F-box and leucine-rich repeat protein 5 transcript_id : NM_178729.3

name	Bst1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:134288868 GeneID:12182 MGI:105370
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : bone marrow stromal cell antigen 1 transcript_id : NM_009763.2

name	Cd38 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142388510 GeneID:12494 MGI:107474
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : CD38 antigen transcript_id : NM_007646.3

name	EG665989 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94374723 GeneID:665989 MGI:3645078
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 64 ESTs, 62 Proteins product : predicted gene, EG665989 transcript_id : XM_980747.1

name	EG384179 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149253888 GeneID:384179 MGI:3645663
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 78 ESTs, 6 Proteins product : predicted gene, EG384179 transcript_id : XM_357471.5

name	Fgfbp1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:47132511 GeneID:14181 MGI:1096350
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : fibroblast growth factor binding protein 1 transcript_id : NM_008009.3

name	Prom1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6679478 GeneID:19126 MGI:1100886
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : prominin 1 transcript_id : NM_008935.1

name	LOC100041413 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149253891 GeneID:100041413
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA product : hypothetical protein LOC100041413 transcript_id : XM_001477174.1

name	Tapt1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:71143115 GeneID:231225 MGI:2683537
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : transmembrane anterior posterior transformation 1 transcript_id : NM_173764.3

name	Ldb2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:116642890 GeneID:16826 MGI:894670
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : LIM domain binding 2 transcript_id : NM_001077398.1

name	Ldb2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:116642897 GeneID:16826 MGI:894670
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : LIM domain binding 2 transcript_id : NM_010698.3

name	LOC100041481 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149253895 GeneID:100041481
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 5 ESTs product : hypothetical protein LOC100041481 transcript_id : XM_001477199.1

name	EG665934 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149253866 GeneID:665934 MGI:3648234
definition	codon_start : 1 product : hypothetical protein protein_id : XP_985498.2

name	Cpeb2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:28565281 CCDS:CCDS19261.1 GeneID:231207 MGI:2442640
definition	GO_component : GO:0005737 - cytoplasm [Evidence IDA] GO_function : GO:0000166 - nucleotide binding [Evidence IEA]; GO:0008187 - poly-pyrimidine tract binding [Evidence IDA]; GO:0003723 - RNA binding [Evidence IEA] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 product : cytoplasmic polyadenylation element binding protein 2 protein_id : NP_787951.1

name	4833430A08Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:85702011 GeneID:399596 MGI:3026998
definition	codon_start : 1 product : hypothetical protein LOC399596 protein_id : NP_001028654.1

name	C1qtnf7 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:61098164 CCDS:CCDS19262.1 GeneID:109323 MGI:1925911
definition	GO_component : GO:0005737 - cytoplasm [Evidence IEA]; GO:0005615 - extracellular space [Evidence IDA] GO_function : GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0006817 - phosphate transport [Evidence IEA]; GO:0051260 - protein homooligomerization [Evidence IDA] codon_start : 1 note : C1q and tumor necrosis factor related protein 5 product : C1q and tumor necrosis factor related protein 7 protein_id : NP_780634.2

name	5730509K17Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:26986583 GeneID:231214 MGI:1924487
definition	codon_start : 1 product : hypothetical protein LOC231214 protein_id : NP_758478.1

name	Fbxl5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30520167 CCDS:CCDS19263.1 GeneID:242960 MGI:2152883
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0003674 - molecular_function [Evidence ND]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0008150 - biological_process [Evidence ND]; GO:0006512 - ubiquitin cycle [Evidence IEA] codon_start : 1 product : F-box and leucine-rich repeat protein 5 protein_id : NP_848844.1

name	Bst1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:134288869 CCDS:CCDS19264.1 GeneID:12182 MGI:105370
definition	GO_component : GO:0016020 - membrane [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IEA] GO_function : GO:0048503 - GPI anchor binding [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0003953 - NAD+ nucleosidase activity [Evidence IEA] GO_process : GO:0006952 - defense response [Evidence IEA] codon_start : 1 note : BP-3 alloantigen product : bone marrow stromal cell antigen 1 protein_id : NP_033893.2

name	Cd38 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31542362 CCDS:CCDS19265.1 GeneID:12494 MGI:107474
definition	GO_component : GO:0016020 - membrane [Evidence IEA]; GO:0005624 - membrane fraction [Evidence IDA] GO_function : GO:0016787 - hydrolase activity [Evidence IEA]; GO:0016798 - hydrolase activity, acting on glycosyl bonds [Evidence IMP]; GO:0003953 - NAD+ nucleosidase activity [Evidence IEA]; GO:0016849 - phosphorus-oxygen lyase activity [Evidence IMP] codon_start : 1 product : CD38 antigen protein_id : NP_031672.2

name	EG665989 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94374724 GeneID:665989 MGI:3645078
definition	codon_start : 1 product : similar to U-snRNP-associated cyclophilin protein_id : XP_985841.1

name	EG384179 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:38080000 GeneID:384179 MGI:3645663
definition	codon_start : 1 product : similar to ribosomal protein L15 protein_id : XP_357471.1

name	Fgfbp1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:47132512 CCDS:CCDS19268.1 GeneID:14181 MGI:1096350
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0019838 - growth factor binding [Evidence IEA] codon_start : 1 product : fibroblast growth factor binding protein 1 protein_id : NP_032035.2

name	Prom1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6679479 GeneID:19126 MGI:1100886
definition	GO_component : GO:0005903 - brush border [Evidence IDA]; GO:0005615 - extracellular space [Evidence IDA]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0005887 - integral to plasma membrane [Evidence IDA]; GO:0016020 - membrane [Evidence IEA]; GO:0005902 - microvillus [Evidence IDA] codon_start : 1 exception : mismatches in translation note : prominin-like 1 product : prominin 1 protein_id : NP_032961.1

name	LOC100041413 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149253892 GeneID:100041413
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001477224.1

name	Tapt1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:71143116 CCDS:CCDS19270.1 GeneID:231225 MGI:2683537
definition	codon_start : 1 product : transmembrane anterior posterior transformation 1 protein_id : NP_776125.2

name	Ldb2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:116642898 CCDS:CCDS19271.1 GeneID:16826 MGI:894670
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] codon_start : 1 note : isoform 1 is encoded by transcript variant 1 product : LIM domain binding 2 isoform 1 protein_id : NP_034828.3

name	Ldb2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:116642891 GeneID:16826 MGI:894670
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] codon_start : 1 note : isoform 2 is encoded by transcript variant 2 product : LIM domain binding 2 isoform 2 protein_id : NP_001070866.1

name	LOC100041481 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149253896 GeneID:100041481
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001477249.1

name	EG665994 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:665994
definition	number : 1 pseudo : _no_value

name	EG665994 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:665994
definition	number : 2 pseudo : _no_value

name	LOC100040677 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040677
definition	number : 4 pseudo : _no_value

name	LOC100040677 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040677
definition	number : 3 pseudo : _no_value

name	LOC100040677 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040677
definition	number : 2 pseudo : _no_value

name	LOC100040677 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040677
definition	number : 1 pseudo : _no_value

name	LOC100040717 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040717
definition	number : 3 pseudo : _no_value

name	LOC100040717 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040717
definition	number : 2 pseudo : _no_value

name	LOC100040717 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040717
definition	number : 1 pseudo : _no_value

name	LOC433883 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149253887 GeneID:433883
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs, 12 Proteins product : similar to SUMO-1 specific protease 4 pseudo : _no_value transcript_id : XR_033005.1

name	LOC545747 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149253867 GeneID:545747
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 mRNAs, 71 ESTs, 94 Proteins product : similar to RAB2, member RAS oncogene family pseudo : _no_value transcript_id : XR_032098.1

clone name	MSMg01-398B18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-540B16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-150F01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-078J22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-532O22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-276K22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-075M05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-080B09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-455C18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-406H08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-443G19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-149O17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-087J11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-377H19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-123B16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-118I09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-484N05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-452H07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-334I24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-352O03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-406J10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-399K23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-056K14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-531I22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-176F08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-154F21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-367F15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-369B23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-297C09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-333L02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-319H08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-295L18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-311L17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-543O12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-547E09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-133M19
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-379M21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-138O14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-138K22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-121M23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-492N15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-469P23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-119L19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-269J13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-357L22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-139H02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-288L08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-291D15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-271H23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-488C18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-431C16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-074A06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-071P13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-458J14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-133N11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-401F10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-302A13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-143J10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-135G05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-440G22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-088N14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-309L17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-428I16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-167D06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-139D21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-459K04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-491B09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-407E16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-267J09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-107B02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-176I03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-263B14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-444F11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-372I12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-157D01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-407M19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-426H05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-107A15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-271B05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-537P17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-433L07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-113K01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-138I23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-449G18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-532B13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-335B05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-509J18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-425A01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-264D11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-499J05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-152F17
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-050M08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-477A06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-291P03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-428I01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-395J22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-329H18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-198K02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-200G18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-319K06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-153N07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-007E23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-167I15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-182D12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-095F20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-111G08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-138L02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-034N13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-131A16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-235C11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-036B13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-124N02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-126B05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-157O02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-210P19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-259B16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-099F05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-213N10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-095H02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-140J15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-065B14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-246F13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-067M01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-060J05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-257M09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-252M15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-286B22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-255M14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-157L18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-307B16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-174F12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-083P15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-063M17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-083E22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-108G19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-049C05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-088K05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-019M22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-238H19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-059O02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-170G18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-244O23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-098K07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-313P11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-339I20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-173P07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-140B05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-001E19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-003O08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-252P12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-005J15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-160O19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-140D23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-040A08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-093J15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-096G14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-281E18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-265H17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-010P10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-081I03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-212E06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-124H24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-225I04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-294D11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-210C08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-198J23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-050H24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-091L22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-350H19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-045K10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-260K20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-248F17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-043H02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-005L19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-008C11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-226F19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-313K09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-018N19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-128B10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-176F19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-076D04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-145F09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-078P11
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-339I20.b	B6Ng01-339I20.g
ACC	GA123520	GA123521
length	542	382
definition	B6Ng01-339I20.b	B6Ng01-339I20.g
singlet/doublet	singlet	singlet
BLAST hit	unique	unique
Map location.	(44,258,080 - 44,258,621)	(97,591,082 - 97,591,328)
sequence	gaattctgtgctgataaaatggcctgacctgttcagtcttctctgctgtc agacctgatgaccccagtttaatgccttggacacacatggcagagagaga gaaaggacccctcaaaggtgtccttggtcctccattcatgtcctgtggca tatattcacacacacacacacacacacacacacacacacacacacacaca cagagagagagagagagagagagagagagagagagagagagagagagaga gaaccaaagaactgcaggaacaaaaatgaaggtccagttaacaggcccag ctcaaggggaggctccaaggcctgacattattactgatgctatggagtgc ttacaaacaagggcctaacatgactgcctttcgaaaggcccaacaagcag ctgaatgagtccgatgcagatatttacacccaatcaatgcacagaagctg gtgacccctgtggttaaattagggaaaagctagaagaagctgaggaggag ggcaaccctataagaacagcagtctcaactaacctggacctt	tgtgtctgtgggtgggttcaaacagttatatctttttttttaattatttt atttacttgagtacactctatctgtcttcagacacaccagaagagggctt caggtctcattacagatggttgtgagccaccaagtggttgctgggaattg aactcaggacctctggaagagcagtcagtgcacttaaccattgagtcatc tctccagcccaaacagttatatcttgaatagagggccttggaattaagca cagtggtagaatgcatgactagtgagcacaggccctgggatcaaccccca gtactgaaacaggcaggcaagcaagcaagcaagcaagcaagcaaggaagg aaggaaggaagaaagaaaggaaggaagagaaa
quality values	Open. Hide. 58 33 50 42 62 62 47 47 62 62 62 62 62 41 33 62 62 62 62 47 46 43 62 62 62 62 47 59 62 62 62 59 59 44 30 56 59 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 59 62 62 62 59 59 62 62 59 59 62 62 62 62 59 54 54 54 62 62 62 62 62 62 62 62 59 62 59 59 62 62 62 62 62 62 62 62 54 62 62 54 59 59 59 59 59 59 62 62 62 62 62 62 59 59 54 49 42 54 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 59 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 62 62 59 62 59 62 54 62 62 62 62 62 56 62 59 62 59 62 59 62 59 62 54 54 59 54 54 62 62 54 54 59 59 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 59 62 62 59 59 62 59 51 50 62 62 62 62 62 62 62 62 62 62 62 62 59 50 62 56 59 59 51 59 62 62 62 62 62 62 59 62 59 62 62 59 59 59 62 59 59 50 62 62 56 49 46 59 62 59 62 59 62 51 59 59 62 51 59 59 62 59 59 59 62 62 62 59 59 59 59 59 62 59 59 62 62 59 56 59 59 46 44 59 59 62 56 56 56 62 62 56 62 56 56 56 56 56 62 62 56 62 56 56 56 50 51 56 56 43 56 56 62 50 56 56 56 56 56 38 56 56 62 62 62 56 62 62 56 62 62 56 56 62 62 62 56 56 56 56 62 56 56 62 62 51 62 62 62 56 62 62 62 56 56 38 62 62 62 62 56 56 56 56 50 56 62 62 56 62 62 62 56 62 62 62 62 56 62 62 62 56 56 43 56 56 62 62 49 62 47 43 52 52 43 44 62 51 62 62 52 48 52 52 52 62 62 62 62 62 62 38 62 62 62 52 54 62 62 62 58 58 54 54 52 42 48 52 52 58 54 58 45 42 58 54 54 58 58 52 52 52 52 52 52 52 54 58 58 49 52 58 52 54 52 52 52 52 52 54 52 58 52 52 52 52 44 38 52 52 52 52 54 52 44 52 52 52 52	Open. Hide. 59 59 62 62 62 62 62 38 56 59 49 38 62 62 62 62 62 62 59 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 54 54 62 62 59 62 62 54 54 62 62 62 62 59 62 62 62 59 62 62 62 62 62 54 59 59 62 62 59 54 49 62 59 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 59 54 54 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 54 54 62 62 62 62 62 62 62 62 62 62 59 62 59 62 62 54 54 62 62 62 59 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 56 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 38 47 62 62 56 62 62 62 62 62 62 62 51 46 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 58 54 58 58 58 58 58 58 58 54 54 54 54 54 54 52 52 52 54 54 54 54 54 58 49 22 41 58 49 58 58 58 58 58 58 58 58 58 58 58 58 49 58 58 58 41 41 49 58 58 58 49 58 58 58 58 58 39 38 41 58

Alignment Information

BAC End 1

BAC End 2

seq1: chr5_44258080_44258621
seq2: B6Ng01-339I20.b_48_589

seq1  GAATTCTGTGCTGATAAAATGGCCTGACCTGTTCAGTCTTCTCTGCTGTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTGCTGATAAAATGGCCTGACCTGTTCAGTCTTCTCTGCTGTC  50

seq1  AGACCTGATGACCCCAGTTTAATGCCTTGGACACACATGGCAGAGAGAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACCTGATGACCCCAGTTTAATGCCTTGGACACACATGGCAGAGAGAGA  100

seq1  GAAAGGACCCCTCAAAGGTGTCCTTGGTCCTCCATTCATGTCCTGTGGCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGGACCCCTCAAAGGTGTCCTTGGTCCTCCATTCATGTCCTGTGGCA  150

seq1  TATATTCACACACACACACACACACACACACACACACACACACACACACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATTCACACACACACACACACACACACACACACACACACACACACACA  200

seq1  CAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA  250

seq1  GAACCAAAGAACTGCAGGAACAAAAATGAAGGTCCAGTTAACAGGCCCAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACCAAAGAACTGCAGGAACAAAAATGAAGGTCCAGTTAACAGGCCCAG  300

seq1  CTCAAGGGGAGGCTCCAAGGCCTGACATTATTACTGATGCTATGGAGTGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAAGGGGAGGCTCCAAGGCCTGACATTATTACTGATGCTATGGAGTGC  350

seq1  TTACAAACAAGGGCCTAACATGACTGCCTTTCGAAAGGCCCAACAAGCAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACAAACAAGGGCCTAACATGACTGCCTTTCGAAAGGCCCAACAAGCAG  400

seq1  CTGAATGAGTCCGATGCAGATATTTACACCCAATCAATGCACAGAAGCTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAATGAGTCCGATGCAGATATTTACACCCAATCAATGCACAGAAGCTG  450

seq1  GTGACCCCTGTGGTTAAATTAGGGAAAAGCTAGAAGAAGCTGAGGAGGAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGACCCCTGTGGTTAAATTAGGGAAAAGCTAGAAGAAGCTGAGGAGGAG  500

seq1  GGCAACCCTATAAGAACAGCAGTCTCAACTAACCTGGACCTT  542
      ||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAACCCTATAAGAACAGCAGTCTCAACTAACCTGGACCTT  542

seq1: chr11_97591082_97591328
seq2: B6Ng01-339I20.g_178_452 (reverse)

seq1  ------------------TTTCTTCCTTCCTTCCTTTCTTTC-TGTTTGC  31
                        |||||||||||||||||| ||| | || ||||
seq2  TTTCTCTTCCTTCCTTTCTTTCTTCCTTCCTTCCTTCCTTGCTTGCTTGC  50

seq1  TTG-TTTTTTGTTT------TTGTTTTTGTTTTGAGGTCTCACTCTGTAG  74
      ||| ||  ||| ||       |||||  ||  || ||         || |
seq2  TTGCTTGCTTGCTTGCCTGCCTGTTTCAGTACTGGGG---------GTTG  91

seq1  A--CCAGGCTGGCCTTGAACTCAC--------CCTCCGCCCACCTCTGC-  113
      |  ||||   |||| ||  |||||        | | |  ||| || ||| 
seq2  ATCCCAG---GGCC-TGTGCTCACTAGTCATGCATTCTACCA-CTGTGCT  136

seq1  ---CTCCAGAATGCTGGCGTTAAAAGAATGTACC-----AGGCTGGAAAG  155
          |||  || ||   |  |  ||| || || |      ||||||| ||
seq2  TAATTCC--AAGGCCCTCTATTCAAG-ATATAACTGTTTGGGCTGGAGAG  183

seq1  ATGGCTCAGCTGTTAAGAGCACTGACTGCTCTTCCAGAGGTTCTGAGTTC  205
      ||| ||||   |||||| ||||||||||||||||||||||| ||||||||
seq2  ATGACTCAATGGTTAAGTGCACTGACTGCTCTTCCAGAGGTCCTGAGTTC  233

seq1  AATTCCCAGCAACTACATGGTGGCTCACAACCATCTGTAATG  247
      ||||||||||||| || |||||||||||||||||||||||||
seq2  AATTCCCAGCAACCACTTGGTGGCTCACAACCATCTGTAATG  275

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information