BAC Information

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BAC

Clone NameB6Ng01-340B07
Chromosome11 (Build37)
Map Location 11,412,581 - 11,413,805
singlet/doubletsinglet
Overlap gene4930415F15Rik
Upstream geneVwc2, Zpbp, LOC625132, EG432534
Downstream geneIkzf1, Fignl1, Ddc, Grb10, Cobl
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-340B07.bB6Ng01-340B07.g
ACCGA123891GA123892
length1,2081,171
definitionB6Ng01-340B07.b B6Ng01-340B07.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcagaatggagactcctttccattcatcttccaaagtttaagcaat
taaaaggctcaagctggcccataagtcttctcttctacaatgactcctgg
caaatgcaccacccctatcctctgtgtgaagagatgggaacagttctcat
ttcctgtccctgcattagtcctcagtctggcaggaagccctcactttacc
agtgctatcagaattcagatggcctaaggttggggaacagggtaggagaa
agaggaagcagggtactgagagtgattgcttctttaagaagtttagaagt
cggggctggagagatggctcagaggttaagagcactgactgctcttccac
agatcctgagttcaaatcccagcaaccacatggtgactcataaccatctg
taacaagatctgacaccctcttctggagtgtctgaaagacagctacagtg
tgcttacatataataataagtaactcttaaaaatatacaaaagaacttta
gaagtcaagagactagccagtcagtagaggaaagtcagatgctaagtaag
agatgcatagatatgaagaagtttcaagcggagggggaagaacaagcctt
tcacaagtgagcaaatatcttcctgagaggaagagaaagaatccatggac
tcatggggagcagggaaggactggaggattatatgtagacctgaaaaact
tggttatagccagtgcagaaacaggtataggtgtctaaaaagagagcaac
agataacaaaggctcagaaatcatatagtggagtaaaaaaatgcaagagt
tcccagataatgtgatgcccagaaagaaacaggcattagaccacgtagac
acaaccaagagaaaagcagctcaccgcacctgtatgatagatagtcagac
acatggccttatgctttcatcgggcattttcagaaaagcacttgaatagt
gctacaaaatatcagagatggggacttcatggaggagagctttgatcaac
actccccccccttcttttaccccaaaggccagactaatgcagacgccacc
ttctgtgagagaatcatctttatgtcagtgcaaggtgtttaaattaacac
ctccttctttttctctgactgtacttctccagcagaaagcatctcagact
gctgatgttttgtgagggcgcacttgcgtgagctgttcagagtgaagcca
acacacgc
gaattctcacctgaggaataccgaatggcagagaaacaactgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggtgtggatgtggagaaagaggaacactcctccattgttggtg
ggagtgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaactggacatagtactactggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatactccactat
gttcatagcagccttatttataatagccagaagctggaaagaacctagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctaggcaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
gaaactcacacaatatgtactcactgataagtggatattagccccaaacc
taggatacccaagatataagatataatttgctaaacacatgaaactcaag
aagaatgaagactgaagtgtggacactatgctcctccttagatttgggaa
caaaacacctatggaaggagttacagagacaaagtttggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcatccaaacgctgacaccattgcatacactagcaagattttattgaaa
ggacccagatgtagctgtctcttgtgagactatgccggggcctagcaagc
acagaagtggatgctcacagtcagctaatggatggatcatagggctccca
atggagagctagagaagtacccaaggagctaaaggatctgcaaccctata
gtgaacaacattatgaactaaccagtaccccgagctctgactcttagctg
catatatatcaaaggatgctagtcgcatcactggaaagaagagtccatga
ctagcaacttaatgctcagttacaggaacaccagggccaaaaaggggatt
ggttggcacgggaagtggggt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_11412581_11413805
seq2: B6Ng01-340B07.b_46_1253 (reverse)

seq1  GCGTGTGTTGGCTTCACTCTGACCAGCCTACAGGGCACAGTCGCCCCTCA  50
      |||||||||||||||||||||| ||||  ||   ||| |||   ||||||
seq2  GCGTGTGTTGGCTTCACTCTGAACAGCTCAC---GCA-AGTGCGCCCTCA  46

seq1  CAAAAACCATCAGCAG-CTGAGATGCTTCTGGCCTGAGAAAGGACAGTCC  99
      |||||  ||||||||| |||||||||||   ||  ||| ||| ||||| |
seq2  CAAAA--CATCAGCAGTCTGAGATGCTTTCTGCTGGAG-AAGTACAGT-C  92

seq1  AGAGAAAAAGGAAGA-GTGTAAATTTAAAACAACTCTGCACTGACATAAA  148
      |||||||||| | || |||| ||||| ||||| || ||||||||||||||
seq2  AGAGAAAAAGAAGGAGGTGTTAATTT-AAACACCT-TGCACTGACATAAA  140

seq1  GATGATTCCTCTCACAGGAAGGTGGGCCGTCTGCATTTAGTCTGGCCCTT  198
      ||||||| |||||||| ||||||||  |||||||| ||||||||||| ||
seq2  GATGATT-CTCTCACA-GAAGGTGG--CGTCTGCA-TTAGTCTGGCCTTT  185

seq1  GGGGTAAAAAGAAAGGGGGGGGGAGTGTTGATCAAAGCTCTCCTCCATGA  248
      ||||| |||||||  |||||||||||||||||||||||||||||||||||
seq2  GGGGT-AAAAGAA--GGGGGGGGAGTGTTGATCAAAGCTCTCCTCCATGA  232

seq1  AGTCCCCATCTCTGATATTTTTGTAGCACTATTCAAGTGCTTTTCTGAAA  298
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  AGTCCCCATCTCTGATA-TTTTGTAGCACTATTCAAGTGCTTTTCTGAAA  281

seq1  ATGCCCGATGAAAGCATAAGGCCATGTGTCTGACTATCTATCATACAGGT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCCCGATGAAAGCATAAGGCCATGTGTCTGACTATCTATCATACAGGT  331

seq1  GCGGTGAGCTGCTTTTCTCTTGGTTGTGTCTACGTGGTCTAATGCCTGTT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGGTGAGCTGCTTTTCTCTTGGTTGTGTCTACGTGGTCTAATGCCTGTT  381

seq1  TCCTTCTGGGCATCACATTATCTGGGAACTCTTGCATTTTTTTACTCCAC  448
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTCTGGGCATCACATTATCTGGGAACTCTTGCATTTTTTTACTCCAC  431

seq1  TATATGATTTCTGAGCCTTTGTTATCTGTTGCTCTCTTTTTAGACACCTA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATGATTTCTGAGCCTTTGTTATCTGTTGCTCTCTTTTTAGACACCTA  481

seq1  TACCTGTTTCTGCACTGGCTATAACCAAGTTTTTCAGGTCTACATATAAT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTGTTTCTGCACTGGCTATAACCAAGTTTTTCAGGTCTACATATAAT  531

seq1  CCTCCAGTCCTTCCCTGCTCCCCATGAGTCCATGGATTCTTTCTCTTCCT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCAGTCCTTCCCTGCTCCCCATGAGTCCATGGATTCTTTCTCTTCCT  581

seq1  CTCAGGAAGATATTTGCTCACTTGTGAAAGGCTTGTTCTTCCCCCTCCGC  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGGAAGATATTTGCTCACTTGTGAAAGGCTTGTTCTTCCCCCTCCGC  631

seq1  TTGAAACTTCTTCATATCTATGCATCTCTTACTTAGCATCTGACTTTCCT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAACTTCTTCATATCTATGCATCTCTTACTTAGCATCTGACTTTCCT  681

seq1  CTACTGACTGGCTAGTCTCTTGACTTCTAAAGTTCTTTTGTATATTTTTA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTGACTGGCTAGTCTCTTGACTTCTAAAGTTCTTTTGTATATTTTTA  731

seq1  AGAGTTACTTATTATTATATGTAAGCACACTGTAGCTGTCTTTCAGACAC  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTTACTTATTATTATATGTAAGCACACTGTAGCTGTCTTTCAGACAC  781

seq1  TCCAGAAGAGGGTGTCAGATCTTGTTACAGATGGTTATGAGTCACCATGT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGAAGAGGGTGTCAGATCTTGTTACAGATGGTTATGAGTCACCATGT  831

seq1  GGTTGCTGGGATTTGAACTCAGGATCTGTGGAAGAGCAGTCAGTGCTCTT  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTGCTGGGATTTGAACTCAGGATCTGTGGAAGAGCAGTCAGTGCTCTT  881

seq1  AACCTCTGAGCCATCTCTCCAGCCCCGACTTCTAAACTTCTTAAAGAAGC  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTCTGAGCCATCTCTCCAGCCCCGACTTCTAAACTTCTTAAAGAAGC  931

seq1  AATCACTCTCAGTACCCTGCTTCCTCTTTCTCCTACCCTGTTCCCCAACC  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCACTCTCAGTACCCTGCTTCCTCTTTCTCCTACCCTGTTCCCCAACC  981

seq1  TTAGGCCATCTGAATTCTGATAGCACTGGTAAAGTGAGGGCTTCCTGCCA  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGCCATCTGAATTCTGATAGCACTGGTAAAGTGAGGGCTTCCTGCCA  1031

seq1  GACTGAGGACTAATGCAGGGACAGGAAATGAGAACTGTTCCCATCTCTTC  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTGAGGACTAATGCAGGGACAGGAAATGAGAACTGTTCCCATCTCTTC  1081

seq1  ACACAGAGGATAGGGGTGGTGCATTTGCCAGGAGTCATTGTAGAAGAGAA  1148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAGAGGATAGGGGTGGTGCATTTGCCAGGAGTCATTGTAGAAGAGAA  1131

seq1  GACTTATGGGCCAGCTTGAGCCTTTTAATTGCTTAAACTTTGGAAGATGA  1198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTATGGGCCAGCTTGAGCCTTTTAATTGCTTAAACTTTGGAAGATGA  1181

seq1  ATGGAAAGGAGTCTCCATTCTGAATTC  1225
      |||||||||||||||||||||||||||
seq2  ATGGAAAGGAGTCTCCATTCTGAATTC  1208