BAC Information

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BAC

Clone NameB6Ng01-340N07
Chromosome11 (Build37)
Map Location 11,632,720 - 11,633,574
singlet/doubletsinglet
Overlap geneIkzf1
Upstream geneVwc2, Zpbp, LOC625132, EG432534, 4930415F15Rik
Downstream geneFignl1, Ddc, Grb10, Cobl
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-340N07.g
ACCGA124406
length859
definitionB6Ng01-340N07.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctggagaatgtgtcttagcatggggataagctgatctcatattca
gaagagtagcaatgggtccctatctgtactgttctcatcctccatgaaaa
tgtccctgtaaatatgatctatgtgtgctacacacctgtactgatgcact
cttgtcatgactctgtatacacacaaccttgtgctctggtacaccaggcc
agccaagtacatccatccccatgagcacacacatatcccagccactgacc
caagcttgttctcctgtacacatagccagctcttgcagatatcctctctg
ctcctccccatctgagctggcacctgagaaacaggtgttcctgggaggag
cacatggagaaataaccaaagcagagctggggtttcgttgcctcctgtga
gtgaagttgtcaaaagcctactgaccactccaatcctgatttctcagcct
gagtgtgcgtaagtgcctctccacagacaaaggcacacactgccagccaa
cacctggacctgtggctgcaaaagctgcaggaaaaccgacatccttccca
tcagtcccccttctttgctgagtcactctttgcttggaattctgacaggt
gcccgttgggcttctggaagggagggacagcagaggatccaccctctgtg
tgtcccaggagagattacattatcttcagccaccctgaagctcggcctag
gcttctggaatcggtggggctgacacaaagccagttctggggacagggaa
atgtacggatagccacaaggagctaagccatctgatgttctcttcacctg
agcaccctagggactttagagtgctcagctctgctttgcatgttgttcca
ctcatttca
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_11632720_11633574
seq2: B6Ng01-340N07.g_70_928

seq1  GAATTCTGGAGAATGTGTCTTAGCATGGGGATAAGCTGATCTCATATTCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGGAGAATGTGTCTTAGCATGGGGATAAGCTGATCTCATATTCA  50

seq1  GAAGAGTAGCAATGGGTCCCTATCTGTACTGTTCTCATCCTCCATGAAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAGTAGCAATGGGTCCCTATCTGTACTGTTCTCATCCTCCATGAAAA  100

seq1  TGTCCCTGTAAATATGATCTATGTGTGCTACACACCTGTACTGATGCACT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCCTGTAAATATGATCTATGTGTGCTACACACCTGTACTGATGCACT  150

seq1  CTTGTCATGACTCTGTATACACACAACCTTGTGCTCTGGTACACCAGGCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTCATGACTCTGTATACACACAACCTTGTGCTCTGGTACACCAGGCC  200

seq1  AGCCAAGTACATCCATCCCCATGAGCACACACATATCCCAGCCACTGACC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCAAGTACATCCATCCCCATGAGCACACACATATCCCAGCCACTGACC  250

seq1  CAAGCTTGTTCTCCTGTACACATAGCCAGCTCTTGCAGATATCCTCTCTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCTTGTTCTCCTGTACACATAGCCAGCTCTTGCAGATATCCTCTCTG  300

seq1  CTCCTCCCCATCTGAGCTGGCACCTGAGAAACAGGTGTTCCTGGGAGGAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTCCCCATCTGAGCTGGCACCTGAGAAACAGGTGTTCCTGGGAGGAG  350

seq1  CACATGGAGAAATAACCAAAGCAGAGCTGGGGTTTCGTTGCCTCCTGTGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATGGAGAAATAACCAAAGCAGAGCTGGGGTTTCGTTGCCTCCTGTGA  400

seq1  GTGAAGTTGTCAAAAGCCTACTGACCACTCCAATCCTGATTTCTCAGCCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAAGTTGTCAAAAGCCTACTGACCACTCCAATCCTGATTTCTCAGCCT  450

seq1  GAGTGTGCGTAAGTGCCTCTCCACAGACAAAGGCACACACTGCCAGCCAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGTGCGTAAGTGCCTCTCCACAGACAAAGGCACACACTGCCAGCCAA  500

seq1  CACCTGGACCTGTGGCTGCAAAAGCTGCAGGAAAACCGACATCCTTCCCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTGGACCTGTGGCTGCAAAAGCTGCAGGAAAACCGACATCCTTCCCA  550

seq1  TCAGTCCCCCTTCTTTGCTGAGTCACTCTTTGCTTGGAATTCTGACAGGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTCCCCCTTCTTTGCTGAGTCACTCTTTGCTTGGAATTCTGACAGGT  600

seq1  GCCCGTTGGGCTTCTGGAAGGGAGGGACAGCAGAGGATCCACCCTCTGTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCGTTGGGCTTCTGGAAGGGAGGGACAGCAGAGGATCCACCCTCTGTG  650

seq1  TGTCCCAGGAGAGATTACATTATCTTCAGCCACCCTGAAGCTCGGCCTAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCCAGGAGAGATTACATTATCTTCAGCCACCCTGAAGCTCGGCCTAG  700

seq1  GCTTCTGGAATCGGTGGGGCTGACACAAAGCCAGTTCTGGGGACAGGG-A  749
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  GCTTCTGGAATCGGTGGGGCTGACACAAAGCCAGTTCTGGGGACAGGGAA  750

seq1  ATGTACGGATAGCCACAAGGAGCTAAGCCATCTGATGTTCTCTTCACCTG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTACGGATAGCCACAAGGAGCTAAGCCATCTGATGTTCTCTTCACCTG  800

seq1  AGCACCCTA-GGAC-TTAGAGTGCTCAGCTCTGCTTTGCATG-TGTTCCA  846
      ||||||||| |||| ||||||||||||||||||||||||||| |||||||
seq2  AGCACCCTAGGGACTTTAGAGTGCTCAGCTCTGCTTTGCATGTTGTTCCA  850

seq1  CTCATTTCA  855
      |||||||||
seq2  CTCATTTCA  859