BAC Information

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BAC

Clone NameB6Ng01-341O12
Chromosome11 (Build37)
Map Location 12,147,188 - 12,148,322
singlet/doubletsinglet
Overlap geneCobl
Upstream geneVwc2, Zpbp, LOC625132, EG432534, 4930415F15Rik, Ikzf1, Fignl1, Ddc, Grb10
Downstream geneLOC627244
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-341O12.bB6Ng01-341O12.g
ACCGA125158GA125159
length1,1341,046
definitionB6Ng01-341O12.b B6Ng01-341O12.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccagaggtgtgtcttctttagagaagtcctgagcaagtaatttag
tgaagcccatcacaagactttgtttcttagttcataaagtcatgtttctc
aacaagaaatctataagcaacatctgagtcctaaattagacttgtcagaa
gttagaacccacaggctagccaagttaaactgtctatgcagggactttgc
tttaaagtttgggataattatctatctcatttgctcctctaatatattct
gaaaacactgagtgtcacctatctgaggactccctcccttccgatttcag
tgagctactcaaccacaatttgaaaatattaagtaattaacaattgatga
gtggaaagaaccttcattatagcaaatgggtattagttgtttatggtatt
acttgtttatgtcttcctgtgcctaatgtgtaatataaactcttcatacc
taccctaataggtgcatggatctagtaagaagcagagtgtatataggttc
tggtacattccatagttccaagcacccctgggagctctatggaggggacc
agtgacctgaaagctataggcacctagttgctctctatacacacagctca
ccaactggtgtttggagcttttcaaaatagacgctactctgtcctacagt
gatggaaagaccccaaggcaagagaaactaaaagacaatgctacacagct
aacaggtggttacttacaaattgaaaacttgagcttgctttctctgagaa
ctctttcttctgctttgcagaaagttaaaaagaagcaagattgcaaagca
tctggaagactaagtgtttcggaaagtatggggtagaaatgaagaagaga
gaataagaaggtctgaataggcatgtccaattgaaggtttagaggagagg
aagaaattggccactatgaaccccaggcatgcttgaagcaaaggtcatca
cagttacatgttgtaggcagggtaggggaaccagctgtcatttcccacat
gacagctctaatgtgatctataggatcaggtttgattatattttctttgg
atgacttaacttcttgggtttcttgcacacatctggaaagcatgagtcag
catttggtttaaagaatttggtgatcatcttcag
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtgagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctcttctgggc
atatatccagaagaagccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaaactggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagagcatcatcctgagtgaggtaacacaatcacaaa
ggaactcacacaatatgtactcactgataagtggatactagcccaaaacc
taggatacccacgatataagataaaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacactatgcccctccttagaagtgggaa
caaaaacacccatgaaaggagttacagaaacaaagtatggagctgagatg
aaaggatggaccatgtagagactgccatatccagggatccaccccataat
cagcttccaaatgctgacaccattgcatacactagcaagattttacttga
aaggacccagatgtagctgtcttcttgtgagactatgccggggcctagca
aaccacagaagtggattggctcacagtcagctaatggatggatcacaggg
tctccaattgggaggagcttaagagaaatttacccatggagctaaaggga
tccttcaaccctataaggttggaactaccataggaacgtaaccaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_12147188_12148322
seq2: B6Ng01-341O12.b_51_1184 (reverse)

seq1  CTGAAGATGATACACAAATTCTT--AAACAAATGCTGACTCATGCTTTCC  48
      |||||||||||   |||||||||  || ||||||||||||||||||||||
seq2  CTGAAGATGATCACCAAATTCTTTAAACCAAATGCTGACTCATGCTTTCC  50

seq1  AGA-GTGTGCAAGAAACCCAAG-AGTTAAGTCAATCCAAG-AAATATAAT  95
      ||| |||||||||||||||||| ||||||||||  | ||| |||||||||
seq2  AGATGTGTGCAAGAAACCCAAGAAGTTAAGTCATCCAAAGAAAATATAAT  100

seq1  CAAAACTTGATCCTATAGATCACATTTAAGGAGCTGGTCATGTGGGAAAT  145
      | |||| |||||||||||||||||||    ||||| ||||||||||||||
seq2  C-AAACCTGATCCTATAGATCACATT---AGAGCT-GTCATGTGGGAAAT  145

seq1  GACAGCTGTGTCCCCTACCCTGGCTACAACATTGTAACTGTGATGACCTT  195
      ||||||||  |||||||||||| |||||||| ||||||||||||||||||
seq2  GACAGCTGGTTCCCCTACCCTGCCTACAACA-TGTAACTGTGATGACCTT  194

seq1  TGCTTCAAGCATGCCTGGGGTTCATAGTGGCCAATTTCTTCCTCTCCTCT  245
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTCAAGCATGCCTGGGGTTCATAGTGGCCAATTTCTTCCTCTCCTCT  244

seq1  AAACCTTCAATTGGACATGCCTATTCAGACCTTCTTATTCTCTCTTCTTC  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCTTCAATTGGACATGCCTATTCAGACCTTCTTATTCTCTCTTCTTC  294

seq1  ATTTCTACCCCATACTTTCCGAAACACTTAGTCTTCCAGATGCTTTGCAA  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTACCCCATACTTTCCGAAACACTTAGTCTTCCAGATGCTTTGCAA  344

seq1  TCTTGCTTCTTTTTAACTTTCTGCAAAGCAGAAGAAAGAGTTCTCAGAGA  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGCTTCTTTTTAACTTTCTGCAAAGCAGAAGAAAGAGTTCTCAGAGA  394

seq1  AAGCAAGCTCAAGTTTTCAATTTGTAAGTAACCACCTGTTAGCTGTGTAG  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAAGCTCAAGTTTTCAATTTGTAAGTAACCACCTGTTAGCTGTGTAG  444

seq1  CATTGTCTTTTAGTTTCTCTTGCCTTGGGGTCTTTCCATCACTGTAGGAC  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGTCTTTTAGTTTCTCTTGCCTTGGGGTCTTTCCATCACTGTAGGAC  494

seq1  AGAGTAGCGTCTATTTTGAAAAGCTCCAAACACCAGTTGGTGAGCTGTGT  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTAGCGTCTATTTTGAAAAGCTCCAAACACCAGTTGGTGAGCTGTGT  544

seq1  GTATAGAGAGCAACTAGGTGCCTATAGCTTTCAGGTCACTGGTCCCCTCC  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATAGAGAGCAACTAGGTGCCTATAGCTTTCAGGTCACTGGTCCCCTCC  594

seq1  ATAGAGCTCCCAGGGGTGCTTGGAACTATGGAATGTACCAGAACCTATAT  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGAGCTCCCAGGGGTGCTTGGAACTATGGAATGTACCAGAACCTATAT  644

seq1  ACACTCTGCTTCTTACTAGATCCATGCACCTATTAGGGTAGGTATGAAGA  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTCTGCTTCTTACTAGATCCATGCACCTATTAGGGTAGGTATGAAGA  694

seq1  GTTTATATTACACATTAGGCACAGGAAGACATAAACAAGTAATACCATAA  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTATATTACACATTAGGCACAGGAAGACATAAACAAGTAATACCATAA  744

seq1  ACAACTAATACCCATTTGCTATAATGAAGGTTCTTTCCACTCATCAATTG  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACTAATACCCATTTGCTATAATGAAGGTTCTTTCCACTCATCAATTG  794

seq1  TTAATTACTTAATATTTTCAAATTGTGGTTGAGTAGCTCACTGAAATCGG  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATTACTTAATATTTTCAAATTGTGGTTGAGTAGCTCACTGAAATCGG  844

seq1  AAGGGAGGGAGTCCTCAGATAGGTGACACTCAGTGTTTTCAGAATATATT  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGAGGGAGTCCTCAGATAGGTGACACTCAGTGTTTTCAGAATATATT  894

seq1  AGAGGAGCAAATGAGATAGATAATTATCCCAAACTTTAAAGCAAAGTCCC  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGAGCAAATGAGATAGATAATTATCCCAAACTTTAAAGCAAAGTCCC  944

seq1  TGCATAGACAGTTTAACTTGGCTAGCCTGTGGGTTCTAACTTCTGACAAG  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATAGACAGTTTAACTTGGCTAGCCTGTGGGTTCTAACTTCTGACAAG  994

seq1  TCTAATTTAGGACTCAGATGTTGCTTATAGATTTCTTGTTGAGAAACATG  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAATTTAGGACTCAGATGTTGCTTATAGATTTCTTGTTGAGAAACATG  1044

seq1  ACTTTATGAACTAAGAAACAAAGTCTTGTGATGGGCTTCACTAAATTACT  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTATGAACTAAGAAACAAAGTCTTGTGATGGGCTTCACTAAATTACT  1094

seq1  TGCTCAGGACTTCTCTAAAGAAGACACACCTCTGGAATTC  1135
      ||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCAGGACTTCTCTAAAGAAGACACACCTCTGGAATTC  1134