BAC Information

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BAC

Clone NameB6Ng01-343C16
Chromosome11 (Build37)
Map Location 15,885,200 - 15,886,370
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC432537
Downstream geneLOC665660, Vstm2, Sec61g, Akt2-ps, LOC665689, LOC627583, Egfr, 2810442I21Rik, A630050E13Rik, Plek
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-343C16.bB6Ng01-343C16.g
ACCGA126018GA126019
length1,1681,155
definitionB6Ng01-343C16.b B6Ng01-343C16.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttaattcttagaaaaatatatactgaaaattatttttaaaaca
tgaataattagcattaccagaataaaaagaacatgaacccagcaaagact
cgcataaacataaacttttagtctagtcaaagctgaagcatgtgtgaaag
atttaaagccaaagaaacattaaggtgttcttaattaaattaaaacttgt
ttgagggaacagagtaatctattgtgtacagtagttatatttagttttgg
ggaggatactgtcatgagagatacggaaggcagttattaaaataccttga
aggtattctttttgctattattttttcctacaaaaacaaagataatttgg
cttcaaagtttttaaagatattcaattctgtcagggaaaagacaccatta
ttattttttgatttatacttacaacagactgaaattcgaaagtttaacat
tcttctacatgaatatttattttcatttccaatatttaagaagtaataat
ccaagaaagatagtaataatctaagaaagatatagactgagagatatgga
gagagagagaataatatggcaacaatagtactctgtgaatgcagatggcc
tcccaacatctttgctttcaatatcaagccttaatttgatgatgagtcaa
aagaacatgagtcctaagcagaggtatatgacatgacaactgtcacatca
tataaaatggggttggattttcttaaattcgtgccctacacaaaaagttc
ttaaggcactttgggctcttgttatgaggggaaattcagtcagagtaatg
ttacaagtcattgtaatagtgatacaatttagttctattaaaattaaacc
tgaagattatgaactgtcccaaagttgttttatagcatctcttgagtgca
gcattttgcattgtttctttttcatgggacactttctcaataaaatcctt
caacatctgattctaattgttttactattctatattactccaataggata
atccattaaacaaatgtgaagaaacagccttaatgacatcttgcacttgt
atatgacttattcaattaaccaaattagttcttttacattcaagtctgca
agtatttttctacattcaaagaagaaatcactaagaagaaattgagattc
cggtggtttcctctcttc
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtgagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagaagccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaaactggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagagcatcatcctgagtgaggtaacacaatcacaaa
ggaactcacacaatatgtactcactgataagtggatactagcccaaaacc
taggatacccacgatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacactatgcccctccttagaagtgggaa
caaaacacccatggaaggagttacagaaacaaagtttggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcatccaaacgctgacaccattgcatatactagcaagattttatcgaaa
ggacccagatgtagctgtctcttgtgagactatcccggggcctagcaaca
cagaagtggatgctcacagtcagctaatggatggatcacagggctcccaa
tggagagctagagaaagtatccaagagctaagggatcttcaccctatagt
tggaaaactttatgaactacagtaccctggaggcctctgactctagctgc
attatgtatcgaagatgggcctaatcggcattcactgaagatggccatat
gacaccgcgacctttgtggtccggtacaggtaactccaggtccaaagggg
gagtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_15885200_15886370
seq2: B6Ng01-343C16.b_47_1214 (reverse)

seq1  GAAGAGA-GAAACCACCGAAATCTCAATT--CTCTTGGTGATTTCTTCCT  47
      ||||||| |||||||||| ||||||||||   |||| |||||||||| ||
seq2  GAAGAGAGGAAACCACCGGAATCTCAATTTCTTCTTAGTGATTTCTT-CT  49

seq1  TTGAATGTTAAGAAAATACTTGCAGACTTGAATGTAAAAGAACTAATTTG  97
      ||||||| ||  ||||||||||||||||||||||||||||||||||||||
seq2  TTGAATG-TAGAAAAATACTTGCAGACTTGAATGTAAAAGAACTAATTTG  98

seq1  GTTAATTGAATTAAGTTCATAATACAAGTGCAAGATGTCATTAAGGCTGT  147
      |||||||||| |||| |||| |||||||||||||||||||||||||||||
seq2  GTTAATTGAA-TAAG-TCAT-ATACAAGTGCAAGATGTCATTAAGGCTGT  145

seq1  TTCTTCACATTTGTTTAATGGATTATCCTATTGGAGTAATATAAGAATAG  197
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  TTCTTCACATTTGTTTAATGGATTATCCTATTGGAGTAATAT-AGAATAG  194

seq1  TAAAACAATTAGAATCAGATGTTGAAGGATTTTATTGAGAAAGTGTCCCA  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAACAATTAGAATCAGATGTTGAAGGATTTTATTGAGAAAGTGTCCCA  244

seq1  TGAAAAAGAAACAATGCAAAATGCTGCACTCAAGAGATGCTATAAAACAA  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAAAGAAACAATGCAAAATGCTGCACTCAAGAGATGCTATAAAACAA  294

seq1  CTTTGGGACAGTTCATAATCTTCAGGTTTAATTTTAATAGAACTAAATTG  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGGGACAGTTCATAATCTTCAGGTTTAATTTTAATAGAACTAAATTG  344

seq1  TATCACTATTACAATGACTTGTAACATTACTCTGACTGAATTTCCCCTCA  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCACTATTACAATGACTTGTAACATTACTCTGACTGAATTTCCCCTCA  394

seq1  TAACAAGAGCCCAAAGTGCCTTAAGAACTTTTTGTGTAGGGCACGAATTT  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACAAGAGCCCAAAGTGCCTTAAGAACTTTTTGTGTAGGGCACGAATTT  444

seq1  AAGAAAATCCAACCCCATTTTATATGATGTGACAGTTGTCATGTCATATA  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAAATCCAACCCCATTTTATATGATGTGACAGTTGTCATGTCATATA  494

seq1  CCTCTGCTTAGGACTCATGTTCTTTTGACTCATCATCAAATTAAGGCTTG  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTGCTTAGGACTCATGTTCTTTTGACTCATCATCAAATTAAGGCTTG  544

seq1  ATATTGAAAGCAAAGATGTTGGGAGGCCATCTGCATTCACAGAGTACTAT  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTGAAAGCAAAGATGTTGGGAGGCCATCTGCATTCACAGAGTACTAT  594

seq1  TGTTGCCATATTATTCTCTCTCTCTCCATATCTCTCAGTCTATATCTTTC  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGCCATATTATTCTCTCTCTCTCCATATCTCTCAGTCTATATCTTTC  644

seq1  TTAGATTATTACTATCTTTCTTGGATTATTACTTCTTAAATATTGGAAAT  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGATTATTACTATCTTTCTTGGATTATTACTTCTTAAATATTGGAAAT  694

seq1  GAAAATAAATATTCATGTAGAAGAATGTTAAACTTTCGAATTTCAGTCTG  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAATAAATATTCATGTAGAAGAATGTTAAACTTTCGAATTTCAGTCTG  744

seq1  TTGTAAGTATAAATCAAAAAATAATAATGGTGTCTTTTCCCTGACAGAAT  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTAAGTATAAATCAAAAAATAATAATGGTGTCTTTTCCCTGACAGAAT  794

seq1  TGAATATCTTTAAAAACTTTGAAGCCAAATTATCTTTGTTTTTGTAGGAA  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATATCTTTAAAAACTTTGAAGCCAAATTATCTTTGTTTTTGTAGGAA  844

seq1  AAAATAATAGCAAAAAGAATACCTTCAAGGTATTTTAATAACTGCCTTCC  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATAATAGCAAAAAGAATACCTTCAAGGTATTTTAATAACTGCCTTCC  894

seq1  GTATCTCTCATGACAGTATCCTCCCCAAAACTAAATATAACTACTGTACA  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATCTCTCATGACAGTATCCTCCCCAAAACTAAATATAACTACTGTACA  944

seq1  CAATAGATTACTCTGTTCCCTCAAACAAGTTTTAATTTAATTAAGAACAC  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATAGATTACTCTGTTCCCTCAAACAAGTTTTAATTTAATTAAGAACAC  994

seq1  CTTAATGTTTCTTTGGCTTTAAATCTTTCACACATGCTTCAGCTTTGACT  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAATGTTTCTTTGGCTTTAAATCTTTCACACATGCTTCAGCTTTGACT  1044

seq1  AGACTAAAAGTTTATGTTTATGCGAGTCTTTGCTGGGTTCATGTTCTTTT  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTAAAAGTTTATGTTTATGCGAGTCTTTGCTGGGTTCATGTTCTTTT  1094

seq1  TATTCTGGTAATGCTAATTATTCATGTTTTAAAAATAATTTTCAGTATAT  1147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCTGGTAATGCTAATTATTCATGTTTTAAAAATAATTTTCAGTATAT  1144

seq1  ATTTTTCTAAGAATTAAAGAATTC  1171
      ||||||||||||||||||||||||
seq2  ATTTTTCTAAGAATTAAAGAATTC  1168