BAC Information

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BAC

Clone NameB6Ng01-345E14
Chromosome11 (Build37)
Map Location 86,616,167 - 86,759,887
singlet/doubletdoublet
Overlap geneDhx40, Ypel2
Upstream geneBcas3, Tbx2, Tbx4, LOC668751, Brip1, LOC668803, Ints2, Thrap1, 0610013E23Rik, Rps6kb1, Tubd1, LOC100043687, Tmem49, Ptrh2, Cltc
Downstream geneGdpd1, 1200011M11Rik, LOC668816, Prr11, 1110001A07Rik, Trim37, Ppm1e, Rad51c, Tex14, Sept4, Mtmr4, Hsf5, Rnf43, Supt4h1, Bzrap1, Mpo, Lpo, Mks1, Epx, Olfr462, Olfr463, Olfr464
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-345E14.bB6Ng01-345E14.g
ACCGA127532GA127533
length778468
definitionB6Ng01-345E14.b B6Ng01-345E14.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(86,759,110 - 86,759,887)(86,616,167 - 86,616,640)
sequence
gaattccttgtcgggcaacgtgaagaacggaggggtatttaattacttgc
agttctgttgttaaataaagatcaactttgtcagtgtgtcccaggcttgc
catagcttcccgagtgctggtgttacacactgcaccatcacaccagcctg
gctactctcttgtcatctgtacccctgtccatcaagtcacctgagctggt
aaaaatagcccgagtgtgtgggctgccttcatctctgaactgtttattct
gtcttcaccacctcctgccccatgccacctgccagctagagctcttgctg
gccgcatgctcccttctgcatgggcagtcaggttggttgcgatttggggt
cggtttcccaaataagtaacatggatgtctaactattgatttgtcttctt
gtatttcagtccttccagggaagtcaagggcgagcctacctcttcaactc
agtgtgagtgtttctgactgggtacctgtttattgggtgcaagtctcgag
gggcggggcaagcactcctctgattcatcaatgacctctctctgccttag
taatattagtaataataaaatccctaggggcattcccattaaccactggt
agtcagttaccttaggggaaatttggttggcatcatctccaactaaaact
aatggtactcgctgcagtatccccagcacagggaaaacttagaggggtct
ctgatagaccttcatcgtggaggtcagccagacctgagatttgtgacggt
gtgtgtgagtgtgtgtgtgtgtgtgtgt
caggatagccagggctacacagagaaaccctgtctcgagccccccccccc
ccaaaaaaagagtaaaagagtaacaagtactcttaactatccagccatct
ctccagcccctagtaataaatcatttttttaaaaaaaatctaaccaacat
gtcaaggaacctatgatttaaaaacaaacaaacaaaacatactctaagaa
aaataaacattaacactgtcatggtttgaatatgtctggcccaaggagtg
gtactatttggaggtgtgaactttttggagtgactaaaaagtgactgtgg
gcatgggcttttttttttttttttccccttgaatagccctggctgtccta
gaactcactctgtagacgaggctggccttgaactcagaaatccacctgcc
tctgcctcccaagtgctgggattaaaggggtgcgccaccactgcccagct
gcatttgggcttttagac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_86759110_86759887
seq2: B6Ng01-345E14.b_47_824 (reverse)

seq1  ACACACACACACACACACACTCACACACACCGTCACAAATCTCAGGTCTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACACACACACACACTCACACACACCGTCACAAATCTCAGGTCTG  50

seq1  GCTGACCTCCACGATGAAGGTCTATCAGAGACCCCTCTAAGTTTTCCCTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGACCTCCACGATGAAGGTCTATCAGAGACCCCTCTAAGTTTTCCCTG  100

seq1  TGCTGGGGATACTGCAGCGAGTACCATTAGTTTTAGTTGGAGATGATGCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGGGGATACTGCAGCGAGTACCATTAGTTTTAGTTGGAGATGATGCC  150

seq1  AACCAAATTTCCCCTAAGGTAACTGACTACCAGTGGTTAATGGGAATGCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCAAATTTCCCCTAAGGTAACTGACTACCAGTGGTTAATGGGAATGCC  200

seq1  CCTAGGGATTTTATTATTACTAATATTACTAAGGCAGAGAGAGGTCATTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAGGGATTTTATTATTACTAATATTACTAAGGCAGAGAGAGGTCATTG  250

seq1  ATGAATCAGAGGAGTGCTTGCCCCGCCCCTCGAGACTTGCACCCAATAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAATCAGAGGAGTGCTTGCCCCGCCCCTCGAGACTTGCACCCAATAAA  300

seq1  CAGGTACCCAGTCAGAAACACTCACACTGAGTTGAAGAGGTAGGCTCGCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTACCCAGTCAGAAACACTCACACTGAGTTGAAGAGGTAGGCTCGCC  350

seq1  CTTGACTTCCCTGGAAGGACTGAAATACAAGAAGACAAATCAATAGTTAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGACTTCCCTGGAAGGACTGAAATACAAGAAGACAAATCAATAGTTAG  400

seq1  ACATCCATGTTACTTATTTGGGAAACCGACCCCAAATCGCAACCAACCTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCCATGTTACTTATTTGGGAAACCGACCCCAAATCGCAACCAACCTG  450

seq1  ACTGCCCATGCAGAAGGGAGCATGCGGCCAGCAAGAGCTCTAGCTGGCAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCCCATGCAGAAGGGAGCATGCGGCCAGCAAGAGCTCTAGCTGGCAG  500

seq1  GTGGCATGGGGCAGGAGGTGGTGAAGACAGAATAAACAGTTCAGAGATGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGCATGGGGCAGGAGGTGGTGAAGACAGAATAAACAGTTCAGAGATGA  550

seq1  AGGCAGCCCACACACTCGGGCTATTTTTACCAGCTCAGGTGACTTGATGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAGCCCACACACTCGGGCTATTTTTACCAGCTCAGGTGACTTGATGG  600

seq1  ACAGGGGTACAGATGACAAGAGAGTAGCCAGGCTGGTGTGATGGTGCAGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGGGTACAGATGACAAGAGAGTAGCCAGGCTGGTGTGATGGTGCAGT  650

seq1  GTGTAACACCAGCACTCGGGAAGCTATGGCAAGCCTGGGACACACTGACA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTAACACCAGCACTCGGGAAGCTATGGCAAGCCTGGGACACACTGACA  700

seq1  AAGTTGATCTTTATTTAACAACAGAACTGCAAGTAATTAAATACCCCTCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTGATCTTTATTTAACAACAGAACTGCAAGTAATTAAATACCCCTCC  750

seq1  GTTCTTCACGTTGCCCGACAAGGAATTC  778
      ||||||||||||||||||||||||||||
seq2  GTTCTTCACGTTGCCCGACAAGGAATTC  778

seq1: chr11_86616167_86616640
seq2: B6Ng01-345E14.g_66_539

seq1  GAATTCCAGGATAGCCAGGGCTACACAGAGAAACCCTGTCTCGAGCCCCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGGATAGCCAGGGCTACACAGAGAAACCCTGTCTCGAGCCCCC  50

seq1  CCCCCCCCAAAAAAAGAGTAAAAGAGTAACAAGTACTCTTAACTATCCAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCCCCAAAAAAAGAGTAAAAGAGTAACAAGTACTCTTAACTATCCAG  100

seq1  CCATCTCTCCAGCCCCTAGTAATAAATCATTTTTTTAAAAAAAATCTAAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCTCTCCAGCCCCTAGTAATAAATCATTTTTTTAAAAAAAATCTAAC  150

seq1  CAACATGTCAAGGAACCTATGATTTAAAAACAAACAAACAAAACATACTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACATGTCAAGGAACCTATGATTTAAAAACAAACAAACAAAACATACTC  200

seq1  TAAGAAAAATAAACATTAACACTGTCATGGTTTGAATATGTCTGGCCCAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGAAAAATAAACATTAACACTGTCATGGTTTGAATATGTCTGGCCCAA  250

seq1  GGAGTGGTACTATTTGGAGGTGTGAACTTTTTGGAGTGACTAAAAAGTGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGTGGTACTATTTGGAGGTGTGAACTTTTTGGAGTGACTAAAAAGTGA  300

seq1  CTGTGGGCATGGGCTTTTTTTTTTTTTTTTCCCCTTGAATAGCCCTGGCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGGGCATGGGCTTTTTTTTTTTTTTTTCCCCTTGAATAGCCCTGGCT  350

seq1  GTCCTAGAACTCACTCTGTAGACGAGGCTGGCCTTGAACTCAGAAATCCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTAGAACTCACTCTGTAGACGAGGCTGGCCTTGAACTCAGAAATCCA  400

seq1  CCTGCCTCTGCCTCCCAAGTGCTGGGATTAAAGGCGTGCGCCACCACTGC  450
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  CCTGCCTCTGCCTCCCAAGTGCTGGGATTAAAGGGGTGCGCCACCACTGC  450

seq1  CCAGCTGCATATGGGCTTTAAGAC  474
      |||||||||| |||||||| ||||
seq2  CCAGCTGCATTTGGGCTTTTAGAC  474