BAC Information

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BAC

Clone NameB6Ng01-346G03
Chromosome11 (Build37)
Map Location 88,647,316 - 88,647,863
singlet/doubletsinglet
Overlap genenone
Upstream geneMks1, Epx, Olfr462, Olfr463, Olfr464, Dynll2, Sfrs1, Vezf1, Cuedc1, Mrps23, 1700106J16Rik, LOC668793, Msi2, LOC100038945
Downstream geneAkap1, Scpep1, OTTMUSG00000001305, 2210409E12Rik, Coil, LOC100039051, Trim25, Dgke, A930013B10Rik, Gm525, LOC100039114, Nog, LOC100039047, 4932411E22Rik, Ankfn1
LinkOpen Mouse BAC browser

no map image available.



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-346G03.b
ACCGA128297
length1,097
definitionB6Ng01-346G03.b
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcccaagaagacctggtgaaaagtgtgaaaaagagatcttgcccaa
aatcttgcagcttgggacagacttccccatgctctcctgctcccctggta
cttttccaactgtccacagctttcctggttgaccatctaatactctgtcc
caagatgtcggatgaaaaggagtttgatgactgccttctccttccccttc
actctggggaccaggctttgataggatggagtatctgtgtgggaagtgtt
catctggctcctggtttggggatggtggtggaacagctttccattaccaa
aaaggcatcccgaggagggtaaaagactcctcttccctgttaggacacag
acatagaccccacagataaatctgcttacccacaccaaatgtgcttccct
taaggcacactctaattcagcccatcaaaacctgcctggggtgtggggac
cacttgtgtgagcctgggaagccggaggcctggaggacactgaatgaaat
gtctcacatgctctgccacaaggaccagtaacgaaaatgggaaggagatg
gagggggagcaggaagccgctaccggcctgctctttctgggcagactcac
tatggcacctccaaagtccttccgatggccaggactgctgctcagtgata
acggggtagataacttatgcagcacagatacattggacaaagggacaatc
aggtcctggatagaacgtagagtgacgtgagctttcaccaaccgatcggc
tcataatttaaaatacactgagttctttatttctagaatctcctgctcac
atagctaaaaacataaacactgaagctgcagatgagattgcctttgttat
agatgataaacctgaggctcaagctcagatctttgatatgaaaggctttc
ctcttttttttttttttgttgtattgttgttgtttttcgagacagggttt
ctctgtatagtcttggctgtcctggaactcactttgtagaacagctggcc
tcgaactcagaatccccctgtctctgccttccaagtgtctgggaattaaa
ggcgtgtgcaaccaccgctggcttccttttcctcttttttttttttt
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_88647316_88647863
seq2: B6Ng01-346G03.b_591_1137

seq1  GAGGGGCAGCAGGAAGCCGCTACCGGCCTGCTCTTTCTGGGCAGACTCAC  50
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGGGAGCAGGAAGCCGCTACCGGCCTGCTCTTTCTGGGCAGACTCAC  50

seq1  TATGGCACCTCCAAAGTCCTTCCGATGGCCAGGACTGCTGCTCAGTGATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGCACCTCCAAAGTCCTTCCGATGGCCAGGACTGCTGCTCAGTGATA  100

seq1  ACGGGGTAGATAACTTATGCAGCACAGATACATTGGACAAAGGGACAATC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGGGGTAGATAACTTATGCAGCACAGATACATTGGACAAAGGGACAATC  150

seq1  AGGTCCTGGATAGAACGTAGAGTGACGTGAGCTTTCACCAACCGATCGGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTCCTGGATAGAACGTAGAGTGACGTGAGCTTTCACCAACCGATCGGC  200

seq1  TCATAATTTAAAATACACTGAGTTCTTTATTTCTAGAATCTCCTGCTCAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATAATTTAAAATACACTGAGTTCTTTATTTCTAGAATCTCCTGCTCAC  250

seq1  ATAGCTAAAAACATAAACACTGAAGCTGCAGATGAGATTGCCTTTGTTAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGCTAAAAACATAAACACTGAAGCTGCAGATGAGATTGCCTTTGTTAT  300

seq1  AGATGATAAACCTGAGGCTCAAGCTCAGATCTTTGATATGAAAGGCTTTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGATAAACCTGAGGCTCAAGCTCAGATCTTTGATATGAAAGGCTTTC  350

seq1  CTCTTTTTTTTTTTTTTTGTTGTTATTGTTGTTGTTTTTCGAGACAGGGT  400
      ||| |||||||||||||||||| |||||||||||||||||||||||||||
seq2  CTC-TTTTTTTTTTTTTTGTTG-TATTGTTGTTGTTTTTCGAGACAGGGT  398

seq1  TTCTCTGTATAGTCTTGGCTGTCCTGGAACTCACTTTGTAGACCAGGCTG  450
      |||||||||||||||||||||||||||||||||||||||||| || ||||
seq2  TTCTCTGTATAGTCTTGGCTGTCCTGGAACTCACTTTGTAGAACA-GCTG  447

seq1  GCCTCGAACTCAGAAATCCGCCTGTCTCTGCCTCCCAAGTG-CTGGG-AT  498
      ||||||||||||| ||||| ||||||||||||| ||||||| ||||| ||
seq2  GCCTCGAACTCAG-AATCCCCCTGTCTCTGCCTTCCAAGTGTCTGGGAAT  496

seq1  TAAAGGCGTGTGCCACCACCGCCTGGCTTC--TTTCCTCTTTTTTTTTTT  546
      ||||||||||||| ||||||| ||||||||  ||||||||||||||||||
seq2  TAAAGGCGTGTGCAACCACCG-CTGGCTTCCTTTTCCTCTTTTTTTTTTT  545

seq1  TT  548
      ||
seq2  TT  547