BAC Information

Click to search

BAC

Clone NameB6Ng01-346N20
Chromosome11 (Build37)
Map Location 67,764,598 - 67,765,722
singlet/doubletsinglet
Overlap geneWdr16
Upstream gene9130409J20Rik, A730055C05Rik, 2310004I24Rik, Sco1, Myh3, Myh2, Myh1, Myh4, Myh8, Myh13, Gas7, Rcvrn, Glp2r, LOC544792, Dhrs7c, LOC100041899, Usp43
Downstream geneStx8, Ntn1, Pik3r5, BB220380, BC024997, Ccdc42, Myh10, Ndel1, 9930039A11Rik, Rpl26, Odf4, Arhgef15
LinkOpen Mouse BAC browser

no map image available.



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-346N20.bB6Ng01-346N20.g
ACCGA128642GA128643
length1,1741,113
definitionB6Ng01-346N20.b B6Ng01-346N20.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaggaaaaatatctttaagaacataggtgaaataaagacactcag
ggctatgggtagatatctgtagtagagtgctggtctctccatgcaagggt
gggctctatccactgtactgcagaacgaaactcctcaaaacccacaacaa
tcaatcaaccaaccacactgtcagtggaacaaaccctcaaacaatcattc
aagaaagttcttcaaacagtgaagtggaaacttacgggttttttggggac
acagttggatagtgctttgctggggtaaatacataaaagggcgtttagct
gaagcagacacaggtaaaaggatgttgtgataaagcaagcacgtgaaagg
acacgtgatcaaggattctttgctaacaacacacatgtattggtcgcctt
acattgtgtagttgagctgcatttgttgggactccacagagagaaacaaa
acttccggtggtgtgcccaggctttcttgccacttccacagactcaggct
gattggcagtgtgtcatgctaaggcaagacacatgctggggcaagacctg
tggaggacacgtgatgcttggaggatataaataaaactcattgtacagtg
acgggggctgagcaatacttgtggatctcgagtcttcactgatctttgct
tccctcagaggcacagcagagaagttctcctggtccctcctgctgactgg
agccgaggctgaggcatggctgtctctgctaggtcgtgccaccactgctg
attcctgctcgctatcccgattctcctgaactagactgctggtgtatctg
ggaagtgcttgtgagtgggctgagctgctgctgctgctaacctgtgaact
gaactgccgatttccagacagcacagatgggagttgctccaaagaactat
ttctaaacaggtccacttccccgtatccttccttttccactacctctggt
agatggtgggctatagggaggttaaagcatttaagatcatcatttaaaat
aggatttgagtggctggtgagatgtctcagtgggtaagagagccgactgc
tcctccaaggtccgagttcaatccagcaacctcatgtggctcacaacatc
tggaatcgaaatctggatgctcctctgggagtgtctggagagacagctac
agtgtatcttaccttattatacta
gaattcatggtggtctgaatgaagatggctcccataggctcctatatttg
aatactgtccccccccccccccagggttggtggaactattttggaaggat
taggaggtgtggccttattagaggaggtatgtcactaaggacagcctttc
aaaagagtcaaaccattcccagtttctctcttagccctgtgtttatgtct
taagaggtgaattcttagctactgctccaatgccatgcccggtctgctgg
ctgccatacttcctgccatgatggtcatggactcttaccctctaaaactg
tacacaccaaattaaacactttcctttataagttgccttggccaaggtac
tttatcacagcaaaagaaaagtaattaagagctgcattgcaacaaaagag
tgtgataatattgatataaaaatgaatacatttattagtttatttattaa
tttactttgaaatttgtatgcagaaaggcaaaccatagaatgttcaccac
tatctactgtagttttcatcttccctctacccataaaccaggaggattgg
gtggactggacccctgccgcagcttcaaaattagaccaattgtctgaagc
tagctatcagaaccctgccttccttaccacagtgaccaaccaaaaacggt
catattgcattttcttggcccagcaaaagtttaaccattgggttcctcaa
acactaactttatgtaagcaaattttagatagtctaaaatgaatgtcaaa
gtgataagggattagcaagttttccagaggtgagagtttttcccagacaa
ggctcctagcagagagtggaggtaaggtgacttagtggccagtctccagg
actctccatgcccagacctcaggcactgggacttctaaaatcactccaag
tatgcacacatgactgagaacagctgcatttaacagaggtaacaacaccc
acaaaaatttctgctatgtttcttatgagaaacagtcaaactgaatatga
gccagagatgtgggaacacctcacaaaagatataaagtagcaaaatcatg
aaacggttgcaaatttctgtgcatgagagacatgaactatgtatcgtata
cacttgtgactct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_67764598_67765722
seq2: B6Ng01-346N20.g_67_1179

seq1  GAATTCATGGTGGTCTGAATGAAGATGGCTCCCATAGGCTCCTATATTTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATGGTGGTCTGAATGAAGATGGCTCCCATAGGCTCCTATATTTG  50

seq1  AATACTGTCCCCCCCCCCCCCCAGGGTTGGTGGAACTATTTTGGAAGGAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACTGTCCCCCCCCCCCCCCAGGGTTGGTGGAACTATTTTGGAAGGAT  100

seq1  TAGGAGGTGTGGCCTTATTAGAGGAGGTATGTCACTAAGGACAGCCTTTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGAGGTGTGGCCTTATTAGAGGAGGTATGTCACTAAGGACAGCCTTTC  150

seq1  AAAAGAGTCAAACCATTCCCAGTTTCTCTCTTAGCCCTGTGTTTATGTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGAGTCAAACCATTCCCAGTTTCTCTCTTAGCCCTGTGTTTATGTCT  200

seq1  TAAGAGGTGAATTCTTAGCTACTGCTCCAATGCCATGCCCGGTCTGCTGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGAGGTGAATTCTTAGCTACTGCTCCAATGCCATGCCCGGTCTGCTGG  250

seq1  CTGCCATACTTCCTGCCATGATGGTCATGGACTCTTACCCTCTAAAACTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCATACTTCCTGCCATGATGGTCATGGACTCTTACCCTCTAAAACTG  300

seq1  TACACACCAAATTAAACACTTTCCTTTATAAGTTGCCTTGGCCAAGGTAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACACCAAATTAAACACTTTCCTTTATAAGTTGCCTTGGCCAAGGTAC  350

seq1  TTTATCACAGCAAAAGAAAAGTAATTAAGAGCTGCATTGCAACAAAAGAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATCACAGCAAAAGAAAAGTAATTAAGAGCTGCATTGCAACAAAAGAG  400

seq1  TGTGATAATATTGATATAAAAATGAATACATTTATTAGTTTATTTATTAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGATAATATTGATATAAAAATGAATACATTTATTAGTTTATTTATTAA  450

seq1  TTTACTTTGAAATTTGTATGCAGAAAGGCAAACCATAGAATGTTCACCAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACTTTGAAATTTGTATGCAGAAAGGCAAACCATAGAATGTTCACCAC  500

seq1  TATCTACTGTAGTTTTCATCTTCCCTCTACCCATAAACCAGGAGGATTGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTACTGTAGTTTTCATCTTCCCTCTACCCATAAACCAGGAGGATTGG  550

seq1  GTGGACTGGACCCCTGCCGCAGCTTCAAAATTAGACCAATTGTCTGAAGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGACTGGACCCCTGCCGCAGCTTCAAAATTAGACCAATTGTCTGAAGC  600

seq1  TAGCTATCAGAACCCTGCCTTCCTTACCACAGTGACCAACCAAAAACGGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTATCAGAACCCTGCCTTCCTTACCACAGTGACCAACCAAAAACGGT  650

seq1  CATATTGCATTTTCTTGGCCCAGCAAAAGTTTAACCATTGGGTTCCTCAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATTGCATTTTCTTGGCCCAGCAAAAGTTTAACCATTGGGTTCCTCAA  700

seq1  ACACTAACTTTATGTAAGCAAATTTTAGATAGTCTAAAATGAATGTCAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTAACTTTATGTAAGCAAATTTTAGATAGTCTAAAATGAATGTCAAA  750

seq1  GTGATAAGGGATTAGCAAGTTTTCCAGAGGTGAGAGTTTTTCCCAGACAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATAAGGGATTAGCAAGTTTTCCAGAGGTGAGAGTTTTTCCCAGACAA  800

seq1  GGCTCCTAGCAGAGAGTGGAGGTAAGGTGACTTAGTGGCCAGTCTCCAGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTCCTAGCAGAGAGTGGAGGTAAGGTGACTTAGTGGCCAGTCTCCAGG  850

seq1  ACTCTCCATGCCCAGACCTCAGGCACTGGGACTTCTAAAATCACTCCAAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTCCATGCCCAGACCTCAGGCACTGGGACTTCTAAAATCACTCCAAG  900

seq1  TATGCACACATGACTGAGAACAGCTGCATTTAACAGAGGTAACAACACCC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGCACACATGACTGAGAACAGCTGCATTTAACAGAGGTAACAACACCC  950

seq1  ACAAAAAATTTCTGGCTATGTTTCTTATGAGAAAACAGTCAAACTGAATA  1000
      || |||||||||| ||||||||||||||||| ||||||||||||||||||
seq2  AC-AAAAATTTCT-GCTATGTTTCTTATGAG-AAACAGTCAAACTGAATA  997

seq1  TGAGCCCAGAGATGGTGGGAACA-CTCACAAAAGATTATTAAAGTAGCAA  1049
      |||| |||||||| ||||||||| ||||||||||||   ||||||||| |
seq2  TGAG-CCAGAGAT-GTGGGAACACCTCACAAAAGAT--ATAAAGTAGC-A  1042

seq1  AAATCATGAAAACGTTGGCAAATTTCTGTGCATTGAGAGGACATGGAACT  1099
      |||||||| ||||| | ||||||||||||||| ||||| ||||| |||||
seq2  AAATCATG-AAACGGTTGCAAATTTCTGTGCA-TGAGA-GACAT-GAACT  1088

seq1  ATGTATCGTTATACACTTGTGACTCT  1125
      |||||||| |||||||||||||||||
seq2  ATGTATCG-TATACACTTGTGACTCT  1113