BAC Information

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BAC

Clone NameB6Ng01-350B23
Chromosome11 (Build37)
Map Location 86,777,444 - 86,778,516
singlet/doubletsinglet
Overlap geneYpel2
Upstream geneBrip1, LOC668803, Ints2, Thrap1, 0610013E23Rik, Rps6kb1, Tubd1, LOC100043687, Tmem49, Ptrh2, Cltc, Dhx40
Downstream geneGdpd1, 1200011M11Rik, LOC668816, Prr11, 1110001A07Rik, Trim37, Ppm1e, Rad51c, Tex14, Sept4, Mtmr4, Hsf5, Rnf43, Supt4h1, Bzrap1, Mpo, Lpo, Mks1, Epx, Olfr462, Olfr463, Olfr464
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-350B23.bB6Ng01-350B23.g
ACCGA130891GA130892
length3231,083
definitionB6Ng01-350B23.b B6Ng01-350B23.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
agttttgttttctttttatctttctttctttcttctttttttaaaaaaag
atagggtcttaccttataacactgactgacctggaacttgttacatagac
caggatggccttaaactcctgtctgggatcaccccagctggaattcatat
ttctcacctgaacattcctttgggaaataggaagtgcacagctcatccag
ctgtctcatcttgtccatgctctgtagtccttttgtttagtgctgctgct
gctgctgctgctagtgatgttgttgatgctgctggtggtttggttggttg
gctggttggttggttggttggtt
gaattctcttctgcagcatctcgcgttcagaaggcggggtaggaggaagg
aaccctgccagtctagcatcctgcactgtccttagataatacagagtgaa
gcacctggaggaccacaggcttccctggtggcagagactgaaccctgtgc
ttacagcacctgctctgtgccaggcagtcagacagtaaagaataaaatca
aaaggccctcttccttttctctctctgggccttggtttcctaatccataa
aaggagagagctcagttcaaaggcattcagttctaaagttctgagggcat
ttagaacctcattaggaaacaaggcagttatacgtgaaaagtgcatgtat
ctgctggggatgtgaggatgtggacctgttatcccagaactcaagagtct
gagacatgaagatccagcctggcttaggctacacaatgagactctccatg
gaatgggagtggggcttaaaaaccaggcagctctgcaagcattcaaaaca
gggagggactctcacaggccaggcagattcctatcaaacaacctcagcta
gtctttgagaatgggtagagctttcaagtagtaggatggctcttgccgag
catgggtgaggttctaggttccaaggtccacccccacccctccaatgtat
aggaattaaatggaggagcaaggaagattccccagtatgggctgcgtcag
gaaaagagggtgagatctaccaccatagatacttctacataaccataggt
cagcaaaggccaaaaggagcccaaaccacatgggctgtgctgaaaagaac
tgggcgggtccagttttggcttctctgcaaccctggcctcaggcatgcca
agtaatgcctacctagaagggctgctgtgaagttcaggaaaaagaaacat
ctggaacagtctgacaggcagtgcagagccaaaagcagtgatataaattg
taaatttcttaggtcatcttttttttttttttttttttaatgatacccaa
agccaggtcttcattataacaatccttccttgacctccgcagtgggccct
tgcctcctcccatgtcttactactgagatcact
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_86777444_86778516
seq2: B6Ng01-350B23.g_73_1155

seq1  GAATTCTCTTCTGCAGCATCTCGCGTTCAGAAGGCGGGGTAGGAGGAAGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTTCTGCAGCATCTCGCGTTCAGAAGGCGGGGTAGGAGGAAGG  50

seq1  AACCCTGCCAGTCTAGCATCCTGCACTGTCCTTAGATAATACAGAGTGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCTGCCAGTCTAGCATCCTGCACTGTCCTTAGATAATACAGAGTGAA  100

seq1  GCACCTGGAGGACCACAGGCTTCCCTGGTGGCAGAGACTGAACCCTGTGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACCTGGAGGACCACAGGCTTCCCTGGTGGCAGAGACTGAACCCTGTGC  150

seq1  TTACAGCACCTGCTCTGTGCCAGGCAGTCAGACAGTAAAGAATAAAATCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACAGCACCTGCTCTGTGCCAGGCAGTCAGACAGTAAAGAATAAAATCA  200

seq1  AAAGGCCCTCTTCCTTTTCTCTCTCTGGGCCTTGGTTTCCTAATCCATAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGCCCTCTTCCTTTTCTCTCTCTGGGCCTTGGTTTCCTAATCCATAA  250

seq1  AAGGAGAGAGCTCAGTTCAAAGGCATTCAGTTCTAAAGTTCTGAGGGCAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAGAGAGCTCAGTTCAAAGGCATTCAGTTCTAAAGTTCTGAGGGCAT  300

seq1  TTAGAACCTCATTAGGAAACAAGGCAGTTATACGTGAAAAGTGCATGTAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGAACCTCATTAGGAAACAAGGCAGTTATACGTGAAAAGTGCATGTAT  350

seq1  CTGCTGGGGATGTGAGGATGTGGACCTGTTATCCCAGAACTCAAGAGTCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTGGGGATGTGAGGATGTGGACCTGTTATCCCAGAACTCAAGAGTCT  400

seq1  GAGACATGAAGATCCAGCCTGGCTTAGGCTACACAATGAGACTCTCCATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACATGAAGATCCAGCCTGGCTTAGGCTACACAATGAGACTCTCCATG  450

seq1  GAATGGGAGTGGGGCTTAAAAACCAGGCAGCTCTGCAAGCATTCAAAACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGGGAGTGGGGCTTAAAAACCAGGCAGCTCTGCAAGCATTCAAAACA  500

seq1  GGGAGGGACTCTCACAGGCCAGGCAGATTCCTATCAAACAACCTCAGCTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGGGACTCTCACAGGCCAGGCAGATTCCTATCAAACAACCTCAGCTA  550

seq1  GTCTTTGAGAATGGGTAGAGCTTTCAAGTAGTAGGATGGCTCTTGCCGAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTTGAGAATGGGTAGAGCTTTCAAGTAGTAGGATGGCTCTTGCCGAG  600

seq1  CATGGGTGAGGTTCTAGGTTCCAAGGTCCACCCCCACCCCTCCAATGTAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGGTGAGGTTCTAGGTTCCAAGGTCCACCCCCACCCCTCCAATGTAT  650

seq1  AGGAATTAAATGGAGGAGCAAGGAAGATTCCCCAGTATGGGCTGCGTCAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAATTAAATGGAGGAGCAAGGAAGATTCCCCAGTATGGGCTGCGTCAG  700

seq1  GAAAAGAGGGTGAGATCTACCACCATAGATACTTCTACATAACCATAGGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAGAGGGTGAGATCTACCACCATAGATACTTCTACATAACCATAGGT  750

seq1  CAGCAAAGGCCAAAAGGAGCCCAAACCACATGGGCTGTGCTGAAAAGAAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCAAAGGCCAAAAGGAGCCCAAACCACATGGGCTGTGCTGAAAAGAAC  800

seq1  TGGGCGGGTCCAGTTTTGGCTTCTCTGCAACCCTGGCCTCAGGCATGCCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGCGGGTCCAGTTTTGGCTTCTCTGCAACCCTGGCCTCAGGCATGCCA  850

seq1  AGTAATGCCTACCTAGAAGGGCTGCTGTGAAGTTCAGGAAAAAGAAACAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAATGCCTACCTAGAAGGGCTGCTGTGAAGTTCAGGAAAAAGAAACAT  900

seq1  CTGGAACAGTCTGACAGGCAGTGCAGAGCCAAAAGCAGTGATATAAATTG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAACAGTCTGACAGGCAGTGCAGAGCCAAAAGCAGTGATATAAATTG  950

seq1  TAAATTTCTTAGGTCATC---TTTTTTTTTTTTTTTTTAATGATACCC-A  996
      ||||||||||||||||||   ||||||||||||||||||||||||||| |
seq2  TAAATTTCTTAGGTCATCTTTTTTTTTTTTTTTTTTTTAATGATACCCAA  1000

seq1  AGCCA-GTC-TCATTAATAAC-ATCCT--CCTGACCTCCGCAGTGGG-CC  1040
      ||||| ||| ||||| ||||| |||||  | |||||||||||||||| ||
seq2  AGCCAGGTCTTCATT-ATAACAATCCTTCCTTGACCTCCGCAGTGGGCCC  1049

seq1  TTGC--TCTCCCATGTCTTACCTACTGAGATCACT  1073
      ||||   ||||||||||||| ||||||||||||||
seq2  TTGCCTCCTCCCATGTCTTA-CTACTGAGATCACT  1083