BAC Information

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BAC

Clone NameB6Ng01-350H09
Chromosome11 (Build37)
Map Location 19,918,646 - 19,919,758
singlet/doubletsinglet
Overlap geneSpred2
Upstream geneMeis1, LOC635455, LOC100042708, Glns-ps1, LOC665868, LOC100041937
Downstream geneActr2, Rab1, Cep68, LOC216544, Slc1a4, LOC100042746, LOC382492, Sertad2, LOC665953, Aftph, 1110067D22Rik, LOC100042035
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-350H09.g
ACCGA131123
length1,087
definitionB6Ng01-350H09.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaataattcaacaaatatttgctgagtggctcttttgtagaacaa
gttcccaaataaatcctggggtatggatcaatgcccgtgtgggttacatg
gcccctgggctaatttgaaaggaaaagaaacaagcaccaggcagggagat
tttgttttgtttttttttgttgctgttttaagatggttttactatgtgct
tctagtattttgacattaaaatgtcttttattagctgggcatggtggcat
acgcctgtaatcctgatttggggatgctgaggtaggccagcctgggctac
atgataagctccaagccaggttgagctagaagtaggagaccctgtcttaa
caaacaaaatattcattttaaaactaggtgtggtggcatatgcctgcagt
cccagcacttggaggttgttgctgtgtgatacaaataaataccttaaaaa
aaaaaaaaaaaaaaaaaaaaaaaagcaagaggggaagagagctgactgtg
gtgggaaaagcagcaggcttaaggcccctggccatgttgtatctacagcc
taaagaataattgtactcaggtcaccttcactcttttatacagtccctag
cgaattcctgcctagagaatcgaattcctgcctagggaattgtgctgcct
acagtgggtgtggtgcatcttcctacttaatcaagataaccccctacgag
gctatctctagtaattctcatcaaactgacccttgagattaaccgtcaag
gatgcttagaggagtcaaatctgatcagcctctggaacctgcttatctct
cttgcatttgtgcgtctgtcctttcaatcagattacaatatcagccccag
ctagtgaaccttgtatgctgctttctttaaaagtattttttcttttgtaa
agggccagtgaggttgtcccttacagcaagatgctagagactgattgacc
cccagaaccctcaaaggatagacactcatagatggctctctgatctctac
acgtgtgctgtgatgcatacactattaattaacgagatagtctcactatg
tgctgctgtctagaacctcagagatctgctgctgtac
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_19918646_19919758
seq2: B6Ng01-350H09.g_65_1151

seq1  GAATTCAATAATTCAACAAATATTTGCTGAGTGGCTCTTTTGTAGAACAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATAATTCAACAAATATTTGCTGAGTGGCTCTTTTGTAGAACAA  50

seq1  GTTCCCAAATAAATCCTGGGGTATGGATCAATGCCCGTGTGGGTTACATG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCCCAAATAAATCCTGGGGTATGGATCAATGCCCGTGTGGGTTACATG  100

seq1  GCCCCTGGGCTAATTTGAAAGGAAAAGAAACAAGCACCAGGCAGGGAGAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCCTGGGCTAATTTGAAAGGAAAAGAAACAAGCACCAGGCAGGGAGAT  150

seq1  TTTGTTTTGTTTTTTTTTGTTGCTGTTTTAAGATGGTTTTACTATGTGCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTTTGTTTTTTTTTGTTGCTGTTTTAAGATGGTTTTACTATGTGCT  200

seq1  TCTAGTATTTTGACATTAAAATGTCTTTTATTAGCTGGGCATGGTGGCAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGTATTTTGACATTAAAATGTCTTTTATTAGCTGGGCATGGTGGCAT  250

seq1  ACGCCTGTAATCCTGATTTGGGGATGCTGAGGTAGGCCAGCCTGGGCTAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGCCTGTAATCCTGATTTGGGGATGCTGAGGTAGGCCAGCCTGGGCTAC  300

seq1  ATGATAAGCTCCAAGCCAGGTTGAGCTAGAAGTAGGAGACCCTGTCTTAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATAAGCTCCAAGCCAGGTTGAGCTAGAAGTAGGAGACCCTGTCTTAA  350

seq1  CAAACAAAATATTCATTTTAAAACTAGGTGTGGTGGCATATGCCTGCAGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACAAAATATTCATTTTAAAACTAGGTGTGGTGGCATATGCCTGCAGT  400

seq1  CCCAGCACTTGGAGGTTGTTGCTGTGTGATACAAATAAATACCTTAAAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGCACTTGGAGGTTGTTGCTGTGTGATACAAATAAATACCTTAAAAA  450

seq1  AAAAAAAAAAAAAAAAAAAAAAAAGCAAGAGGGGAAGAGAGCTGACTGTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAAAAAAAAAAAAAAAAAAGCAAGAGGGGAAGAGAGCTGACTGTG  500

seq1  GTGGGAAAAGCAGCAGGCTTAAGGCCCCTGGCCATGTTGTATCTACAGCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGAAAAGCAGCAGGCTTAAGGCCCCTGGCCATGTTGTATCTACAGCC  550

seq1  TAAAGAATAATTGTACTCAGGTCACCTTCACTCTTTTATACAGTCCCTAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGAATAATTGTACTCAGGTCACCTTCACTCTTTTATACAGTCCCTAG  600

seq1  CGAATTCCTGCCTAGAGAATCGAATTCCTGCCTAGGGAATTGTGCTGCCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAATTCCTGCCTAGAGAATCGAATTCCTGCCTAGGGAATTGTGCTGCCT  650

seq1  ACAGTGGGTGTGGTGCATCTTCCTACTTAATCAAGATAACCCCCTACGAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTGGGTGTGGTGCATCTTCCTACTTAATCAAGATAACCCCCTACGAG  700

seq1  GCTATCTCTAGTAATTCTCATCAAACTGACCCTTGAGATTAACCGTCAAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTATCTCTAGTAATTCTCATCAAACTGACCCTTGAGATTAACCGTCAAG  750

seq1  GATGCTTAGAGGAGTCAAATCTGATCAGCCTCTGGAACCTGCTTATCTCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGCTTAGAGGAGTCAAATCTGATCAGCCTCTGGAACCTGCTTATCTCT  800

seq1  CTTGCATTTGTGCGTCTGTCCTTTCAATCAGATTACAATATCAGCCCCAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCATTTGTGCGTCTGTCCTTTCAATCAGATTACAATATCAGCCCCAG  850

seq1  CTAGTGAACCTTGTATGCTGCTTTCTTTAAAAAGTA-TTTTTCTTTTGTA  899
      |||||||||||||||||||||||||||| ||||||| |||||||||||||
seq2  CTAGTGAACCTTGTATGCTGCTTTCTTT-AAAAGTATTTTTTCTTTTGTA  899

seq1  AAGGGCCAGTGAGG-TGTCCCTTACAGCAAAGATGCTAGAGACCTGAATT  948
      |||||||||||||| ||||||||||||| ||||||||||||| ||||  |
seq2  AAGGGCCAGTGAGGTTGTCCCTTACAGC-AAGATGCTAGAGA-CTGA--T  945

seq1  TGACCCCCAGAACCCTCAAAAGGATAGAACCAACTCCATAGAATGGCTCT  998
      ||||||||||||||||| ||||||||||    ||| ||||| ||||||||
seq2  TGACCCCCAGAACCCTC-AAAGGATAGA---CACT-CATAG-ATGGCTCT  989

seq1  CTGATCTCTACACGTGTGCTGTGGAATGCATACCAACTAAATAAATAAAC  1048
      |||||||||||||||||||||||  ||||||||  |||  || ||| || 
seq2  CTGATCTCTACACGTGTGCTGTG--ATGCATAC--ACT--ATTAATTAA-  1032

seq1  CGAGATAAGGTCTCACTATGTGGCCCTGGCTGTCCTAGAACTCACAGAGA  1098
      |||||||  |||||||||||||   || ||||| ||||||| | ||||||
seq2  CGAGATA--GTCTCACTATGTG---CT-GCTGT-CTAGAAC-CTCAGAGA  1074

seq1  TCTGCCTGCCTGTAC  1113
      |||| ||| ||||||
seq2  TCTG-CTG-CTGTAC  1087