Query= MSMg01no046_j23.b1 MSMg01no046_j23.b1 CHROMAT_FILE:
MSMg01no046_j23.b1 PHD_FILE: MSMg01no046_j23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 12:06:49 2005
(574 letters)
>mm_chr11_67448357_67449330
Length = 974
Score = 1035 bits (535), Expect = 0.0
Identities = 562/571 (98%)
Strand = Plus / Minus
Query: 4 ggaattcacttttgagaaacacaaactacaactgcaggagacactagactgggtgctgag 63
||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 774 ggaattcacctttgagaaacacaaactacaactgcaggagacactagactgggttctgag 715
Query: 64 gccagcaccctgtttataaacaggcacagctctgcctcctttcagtcccagcatgccttg 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 714 gccagcaccctgtttataaacaggcacagctctgcctcctttcagtcccagcatgccttg 655
Query: 124 caggtgcttcttcaactccacttcatcagagaattcagagtccccctgaggctttccgga 183
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 654 caggtgcctcttcaactccacttcatcagagaattcagagtccccctgaggctttccgga 595
Query: 184 agagtagttttaaagaatgaccacttgttccagaaacttctgtctggccagttggtcctt 243
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 594 agagtagttttaaagaatgaccgcttgttccagaaacttctgtctggccagttggtcctt 535
Query: 244 actgtatgtcttggctgtctagtatgtagattgtgttcccaaagatgaagttcatggtgc 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 534 actgtatgtcttggctgtctagtatgtagattgtgttcccaaagatgaagttcatggtgc 475
Query: 304 attttctcctatggctgtgattggatgaaagcctaggacagcatggtgggaatcagactc 363
||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||
Sbjct: 474 attttctcctatggctgtgatcgggtgaaagcctaggacagcatggtgggaatcagactc 415
Query: 364 ttcaaacaccaggatcacaggttctaaaggctttgcagccccatttcacaagggagcacc 423
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 414 ttcaaacaacaggatcacaggttctaaaggctttgcagccccatttcacaagggagcacc 355
Query: 424 atactctcccccgctgacgacaactgggaggtctcacttaggttgtggagcaggcttcca 483
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 354 atactctcccccgctgacgacaactgggaggtctcatttaggttgtggagcaggcttcca 295
Query: 484 gcctgactactttctagtccgtgatgtacgagagccctgctcccgaggggcagagggacc 543
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 294 gccttactactttctagtccgtgatgtacgagagccctgctcccgaggggcagagggacc 235
Query: 544 tagagttccctgacctatggctgagcttgag 574
|||||||||||||||||||||||||||||||
Sbjct: 234 tagagttccctgacctatggctgagcttgag 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 574
Length of database: 974
Length adjustment: 10
Effective length of query: 564
Effective length of database: 964
Effective search space: 543696
Effective search space used: 543696
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no046_j23.g1 MSMg01no046_j23.g1 CHROMAT_FILE:
MSMg01no046_j23.g1 PHD_FILE: MSMg01no046_j23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 12:06:49 2005
(634 letters)
>mm_chr11_67343912_67344945
Length = 1034
Score = 1137 bits (588), Expect = 0.0
Identities = 622/634 (98%), Gaps = 3/634 (0%)
Strand = Plus / Plus
Query: 1 cagggtggattcgggtgtggtggcatcatttctgtcctcttaagtctttctagtcatggg 60
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cagggtggatttgggtgtggtggcatcatttctgtcctcttaagtctttctagtcatggg 260
Query: 61 gctggaggtagagctagagcctggaatgctagagagatgccttaagccggcacagcccag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gctggaggtagagctagagcctggaatgctagagagatgccttaagccggcacagcccag 320
Query: 121 aagagcttcctgtggcaacagaaaccttctgtttgtgtcactaccatgtgcttggtcaca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aagagcttcctgtggcaacagaaaccttctgtttgtgtcactaccatgtgcttggtcaca 380
Query: 181 ctggggacatggtaaaagggactgaggaaaggggtctttacatttatttaatttggatta 240
|||||||||||||||||||||| | ||||||||||||| |||||||||||||||||||||
Sbjct: 381 ctggggacatggtaaaagggaccgtggaaaggggtcttcacatttatttaatttggatta 440
Query: 241 acttagatttaaatagcagtagccatatcagatatagcccagctccaaggcatacacgtt 300
|||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 441 acttaggtttaaatagcagtagccatatcagatatagcccagctctaaggcatacacgtt 500
Query: 301 taaggacaagaataggacagtaaaagccttttagtggggccaagtatggtggaatacaca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 taaggacaagaataggacagtaaaagccttttagtggggccaagtatggtggaatacaca 560
Query: 361 tgtctttaacccaacacgtaagagttggaggctagtgcatctctgtttactcagggccag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tgtctttaacccaacacgtaagagttggaggctagtgcatctctgtttactcagggccag 620
Query: 421 cctaacttacatagggagttgcagtacagctagggttacatagtgagatcttgtcctcca 480
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 621 cctaacttacatagggagttgcagtacagctagggttacatagtgagatcttgttctcca 680
Query: 481 aaaaaggaaaataaaaataataaataaattaattaattattaattaattaaaaaggggtc 540
||||||||||||||||||||||||||||| ||| || ||||||||||||||||||||||
Sbjct: 681 aaaaaggaaaataaaaataataaataaataaat-aa--attaattaattaaaaaggggtc 737
Query: 541 tcatgtagcctaggctggcctcaaactctcatgtagctgaagacaatctgaacttctgcc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 738 tcatgtagcctaggctggcctcaaactctcatgtagctgaagacaatctgaacttctgcc 797
Query: 601 tctacacatatgtattggcacgtgtgccctccca 634
|||||||||||| |||||||||||||||||||||
Sbjct: 798 tctacacatatgcattggcacgtgtgccctccca 831
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 634
Length of database: 1034
Length adjustment: 10
Effective length of query: 624
Effective length of database: 1024
Effective search space: 638976
Effective search space used: 638976
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
