TCGGCCGCTATACGACTCCTATAGTTCGAGAATCCGCGGAATTCTCACTA
AGGTACCTTGAATGGGTGAGAAACACCTAAACAAAATGTTCAACATTCTT
AGTCATCAGGGAAATGCATATCAAAATTATCCTGAGATTCCATCTCACAC
CAGTCAGGATGGCTAAGTTAAAAAACCAAGGTGACAGCAGATGCTGGCGA
GGATGTGGAGAAAGAGGAGCACTCCTCCATTGTTGGTGGAATTGCAAACT
GGTACAGCCACTCTGGAAATCAGTGAACTAATACTACCTGAGGATCCAGC
TATACCACTCCTAGGCATTCCAGAAGATGCCCCAACATATAACAAGAACA
CAAGTTTCACTATGTTCATATCAGTTTTATTTATAATAGTCAGAAGCTGG
AAACAACCCAGATGTCCCTCAACAGAGGAATGGATACAGAAAATGTGGTA
TATTTACACAATGGAGTACTACTCAGTTATTAAAAACATTAACTTCACGA
AATTCACAGGCAAATGAATGGCTTCATAAAATATCATCCTGAGTGAGGTA
ACTCAGTCACAAAAGAACAGACATGGTATTTGCTCACAAGTAAGTGGATA
TTAGGCAAAGAGCTTGGAATACCCACAATACAACTCACAGACTACATGAA
GCTCAGGAGGAAGGAAGATCAAAGTGTGAATGCTTCAGTCCTACTTATAA
GGGGGAGCAATATTATCAAGGAAAGTAGAGGGTAG

TGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXATCAGTAATCCCAGTCATTTATCTCTAGGAATTTGG
GAGAAGGGACCTGGACTCTATTTTGTTAAAGTTTTATTTTTATTATATTT
ACTTATATGTGGGTATGTGCACAGCACCACAGAAACTCTTGGAGGCAAGA
ACTATCAGATAGCACTGGAACTTGAATGTAAACGGTCGCAAGCATCTCAG
ACCCTGACATGGGTCTGAACACAGGTCCTCTGCTGGGAGAGAAGGTTTTA
CTGCTAAAACACCTCTCCAACTCAGTGTTCTAGTTTTTAATTATTTGATT
GTTATCATTTTTTAAATAAACAGTTTCTGTTTATTTGCACACACACACAA
AAAAAAAAATCTTAGAATTCCTAACAGGGTTGGCCTTAAACTCATTGGTC
TCTTGAATCAAACTCCCAACTATTAGGAACATAGGCATGTTTTCATACCA
GGCAAACATTTTTTAAAAATGAGGGAAACATAAACACTCAGCCATTGACC
CTTTTCACATAGTTTTAATTTAGCTTGCTTCTGATCTTTGCAAATACTGC
AGCATTTAAGAATAGGAAAGAGATCTAGATGTACAACTTTTGTACATTTT
ATAGACTCTTTAGGGACATTTCAAGAATAATTTTGATTATAAGTTTCACC
TAGACACTGTAACCTAGCATTAACTGTG

Query= MSMg01no052_c21.g1 MSMg01no052_c21.g1 CHROMAT_FILE:
MSMg01no052_c21.g1 PHD_FILE: MSMg01no052_c21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:52:43 2005
         (580 letters)



>mm_chr11_39547513_39548492
          Length = 980

 Score =  746 bits (386), Expect = 0.0
 Identities = 435/458 (94%), Gaps = 12/458 (2%)
 Strand = Plus / Minus

                                                                       
Query: 134 agaactatcagatagcactggaacttgaatgtaaacggtcgcaagcatctcagaccctga 193
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 980 agaactatcagatagcactggaacttgaatgtaaacggtcgcaagcatctcagaccctga 921

                                                                       
Query: 194 catgggtctgaacacaggtcctctgctgggagagaaggttttactgctaaaacacctctc 253
           |||||||||| || ||||||||||||||||||||| ||||||||||||||||||| ||||
Sbjct: 920 catgggtctggactcaggtcctctgctgggagagacggttttactgctaaaacacttctc 861

                                                                       
Query: 254 caactcagtgttctagtttttaattatttgattgttatcattttttaaataaacagtttc 313
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 860 caactcagtgttctagtttttaattatttgattgttatcattttttaaataaacagtttc 801

                                                                       
Query: 314 tgtttatttgcacacacacaca-----------aaaaaaaaaatcttagaattcctaaca 362
           ||||||||||||||||||||||           | | | |||||||||||||||||||||
Sbjct: 800 tgtttatttgcacacacacacacacacacacacacacacaaaatcttagaattcctaaca 741

                                                                       
Query: 363 gggttggccttaaactcattggtctcttgaatcaaactcccaactattaggaacataggc 422
           ||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 740 gggttggccttaaactcgttggtctcttgaatcaaactctcaactattaggaacataggc 681

                                                                       
Query: 423 atgttttcataccaggcaaacattttttaaaaatgagggaaacataaacactcagccatt 482
           |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 680 atgttttcataccaggcaaaca-tttttaaaaatgagggaaacataaacactcagccatt 622

                                                                       
Query: 483 gacccttttcacatagttttaatttagcttgcttctgatctttgcaaatactgcagcatt 542
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 621 gacccttttcacatagttttaatttagcttgcttctgatctttgcaaatcctgcagcatt 562

                                                 
Query: 543 taagaataggaaagagatctagatgtacaacttttgta 580
           |||||||||||||||||||||||| |||||||||||||
Sbjct: 561 taagaataggaaagagatctagatatacaacttttgta 524


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 580
Length of database: 980
Length adjustment: 10
Effective length of query: 570
Effective length of database: 970
Effective search space:   552900
Effective search space used:   552900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)