Query= MSMg01no053_a23.b1 MSMg01no053_a23.b1 CHROMAT_FILE:
MSMg01no053_a23.b1 PHD_FILE: MSMg01no053_a23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:53:51 2005
(430 letters)
>mm_chr3_49585808_49586637
Length = 830
Score = 832 bits (430), Expect = 0.0
Identities = 430/430 (100%)
Strand = Plus / Plus
Query: 1 aactactgaaataaaaatcaaaactgtttcatgggttcataccatgtttttcattaatca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aactactgaaataaaaatcaaaactgtttcatgggttcataccatgtttttcattaatca 260
Query: 61 gcaatcgtacaaagaaagttagctttcaaagacatattacagtacactcacaaagatttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gcaatcgtacaaagaaagttagctttcaaagacatattacagtacactcacaaagatttt 320
Query: 121 acagtgtccaaaattatttccttacgtagtgtgaagtttgaacatcctctaagcacttaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 acagtgtccaaaattatttccttacgtagtgtgaagtttgaacatcctctaagcacttaa 380
Query: 181 aacatattaggcaaagggatgatgatatgttttatcaggtaaaggcatttcctatgccac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aacatattaggcaaagggatgatgatatgttttatcaggtaaaggcatttcctatgccac 440
Query: 241 cctgacacccttagcttcatccttaaatgcagagggaagggagagaaccaaccctgtctt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cctgacacccttagcttcatccttaaatgcagagggaagggagagaaccaaccctgtctt 500
Query: 301 agtcagggtttctattcctgcacaaacatcatgaccaagaagcagttggggaggaaaggg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 agtcagggtttctattcctgcacaaacatcatgaccaagaagcagttggggaggaaaggg 560
Query: 361 tttattcagcttacactttccacattgctgttgatcaccaaaggatgtcaggactggaac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tttattcagcttacactttccacattgctgttgatcaccaaaggatgtcaggactggaac 620
Query: 421 tcaagcaggt 430
||||||||||
Sbjct: 621 tcaagcaggt 630
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 430
Length of database: 830
Length adjustment: 9
Effective length of query: 421
Effective length of database: 821
Effective search space: 345641
Effective search space used: 345641
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no053_a23.g1 MSMg01no053_a23.g1 CHROMAT_FILE:
MSMg01no053_a23.g1 PHD_FILE: MSMg01no053_a23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:53:52 2005
(393 letters)
>mm_chr11_43290955_43291748
Length = 794
Score = 706 bits (365), Expect = 0.0
Identities = 387/395 (97%), Gaps = 3/395 (0%)
Strand = Plus / Minus
Query: 1 tctcagggacaaagttgttttctgtagcttttcagcctctacccaccagttcttactcag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 594 tctcagggacaaagttgttttctgtagcttttcagcctctacccaccagttcttactcag 535
Query: 61 tgtaatcttaaagaaatcaatcagtaggtttgatgcttctttagagtaca--cacgtctg 118
|||||||||||||||||||||||||||||||||||||||||||||||| | || |||||
Sbjct: 534 tgtaatcttaaagaaatcaatcagtaggtttgatgcttctttagagta-aggcatgtctg 476
Query: 119 gagagtatctgaggattttcgtatgcatatgcactattgcatgctgtgctcattgcatgc 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 475 gagagtatctgaggattttcgtatgcatatgcactattgcatgctgtgctcattgcatgc 416
Query: 179 atatgcccattgtatgcatatgcaccattgcatgctgtgctcattgcatgcatatgcacc 238
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 415 atatgcccattgaatgcatatgcaccattgcatgctgtgctcattgcatgcatatgcacc 356
Query: 239 attcatgctgtgccctttgcatgcatatgcccattgtatgcatatgcaccattgcatgct 298
||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 355 attcatgctgtgcccattgcatgcatatgcccattgtatgtatatgcaccattgcatgct 296
Query: 299 gtgcccatggagaccagaagagccactgaaccggtagctaaagaggggtgccatgtgggt 358
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 295 gtgcccatggagaccagaagagccactgaaacggtagctaaagaggggtgccatgtgggt 236
Query: 359 gctgccaacctgagttcatttcccagaaccctctt 393
|||||||||||||||||||||||||||||||||||
Sbjct: 235 gctgccaacctgagttcatttcccagaaccctctt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 3
Number of HSP's successfully gapped: 1
Length of query: 393
Length of database: 794
Length adjustment: 9
Effective length of query: 384
Effective length of database: 785
Effective search space: 301440
Effective search space used: 301440
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
