Query= MSMg01no055_l02.b1 MSMg01no055_l02.b1 CHROMAT_FILE:
MSMg01no055_l02.b1 PHD_FILE: MSMg01no055_l02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:57:10 2005
(315 letters)
>mm_chr11_49196033_49196747
Length = 715
Score = 393 bits (203), Expect = e-114
Identities = 284/311 (91%)
Strand = Plus / Plus
Query: 5 gaattctcccaagaaccaagagtgttaaattcatacactggcatttgggaatagataatt 64
||||||||||||||| ||||||| |||| ||||||||||| ||||||||| |||||||||
Sbjct: 205 gaattctcccaagaagcaagagtattaagttcatacactgacatttgggattagataatt 264
Query: 65 aatgtatatgtgccggtgatggtaagctttgtgcattgtaaaagacacagcaccactcct 124
||||||||||| ||||||||||||||||||||||| ||||||||||||||||| ||||
Sbjct: 265 catgtatatgtggtggtgatggtaagctttgtgcattataaaagacacagcaccattcct 324
Query: 125 ggtctctacacacaacagaaatatttgtacatgtgggaaaatcttccagaatgaatgact 184
|| |||||||||||||||||||||||||||||||| |||| ||||||||| ||| ||| |
Sbjct: 325 ggcctctacacacaacagaaatatttgtacatgtgagaaagtcttccagagtgactgatt 384
Query: 185 tcatctctgattgagaaatgctattgtagatggagtggcatgtagagtgtgctcacagaa 244
||||||||||||||||||||||||| ||||||||||||||||||| |||||||| ||||
Sbjct: 385 tcatctctgattgagaaatgctattatagatggagtggcatgtagggtgtgctcttagaa 444
Query: 245 aatgtcagtgtagaggctgatgactaattttctggtccagtggccagcatagcttagaag 304
||||||||||||||||||||||||||||||||||||||| |||||| ||| ||| | |||
Sbjct: 445 aatgtcagtgtagaggctgatgactaattttctggtccattggccaacattgctgaaaag 504
Query: 305 tgcttcactga 315
|| ||| ||||
Sbjct: 505 tgtttccctga 515
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 315
Length of database: 715
Length adjustment: 9
Effective length of query: 306
Effective length of database: 706
Effective search space: 216036
Effective search space used: 216036
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no055_l02.g1 MSMg01no055_l02.g1 CHROMAT_FILE:
MSMg01no055_l02.g1 PHD_FILE: MSMg01no055_l02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:57:10 2005
(372 letters)
>mm_chr11_49241352_49242122
Length = 771
Score = 673 bits (348), Expect = 0.0
Identities = 366/372 (98%), Gaps = 1/372 (0%)
Strand = Plus / Minus
Query: 1 ttagtcatccatgatctatacgttcattgctggttataacaacattcagacatgctgatg 60
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 571 ttagtcatccatgatctatacgttcattgctggttataacagcattcagacatgctgatg 512
Query: 61 acttttcaaatgaataaaacctcaagcacattaaaattctgaaaccacaactcaaaagga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 511 acttttcaaatgaataaaacctcaagcacattaaaattctgaaaccacaactcaaaagga 452
Query: 121 tctgaatataatgaaatgtgaatacataagctactatggtcaatttgacaatgttgtcaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 451 tctgaatataatgaaatgtgaatacataagctactatggtcaatttgacaatgttgtcaa 392
Query: 181 ttgtcaatattgacactattgtcagtaagatggtattgaagaggaaaaatcaaatttagt 240
|||||||||| |||||||| ||||||||||||||| |||||||||||||||||||||||
Sbjct: 391 ttgtcaatatcaacactatt-tcagtaagatggtatagaagaggaaaaatcaaatttagt 333
Query: 241 tttaccagtgcatcagacaaacatgcatagagggtatcatgctgaaatcttgatatttac 300
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 tttaccactgcatcagacaaacatgcatagagggtatcatgctgaaatcttgatatttac 273
Query: 301 ttacttaatatgtagaaaagatgacttctgaggtaagatggaggtttgtaaactctctat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 ttacttaatatgtagaaaagatgacttctgaggtaagatggaggtttgtaaactctctat 213
Query: 361 atgactgtgaga 372
||||||||||||
Sbjct: 212 atgactgtgaga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 372
Length of database: 771
Length adjustment: 9
Effective length of query: 363
Effective length of database: 762
Effective search space: 276606
Effective search space used: 276606
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
