Query= MSMg01no059_j17.b1 MSMg01no059_j17.b1 CHROMAT_FILE:
MSMg01no059_j17.b1 PHD_FILE: MSMg01no059_j17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:02:09 2005
(326 letters)
>mm_chr11_32347056_32347781
Length = 726
Score = 590 bits (305), Expect = e-173
Identities = 319/325 (98%), Gaps = 4/325 (1%)
Strand = Plus / Plus
Query: 3 gaattctaggacatctcc--tgctatagaaagaaacctatctcaagccaggtgtggtggc 60
||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||
Sbjct: 203 gaattctaggacatc--cagtgctatagaaagaaacctatctcaagccaggtgtggtggc 260
Query: 61 gcatgcctttaatcccagcactcgggaggcagaggcaggcggatttctgagttcaaggcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gcatgcctttaatcccagcactcgggaggcagaggcaggcggatttctgagttcaaggcc 320
Query: 121 agcctggtctaccgagtgagttccaggacagccaggactatacagagaaaccctgtctca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agcctggtctaccgagtgagttccaggacagccaggactatacagagaaaccctgtctca 380
Query: 181 aaacaaacaaaaaagaaagaaagaaacctgtctcagaaaacaacaacaaaaagtagtacc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aaacaaacaaaaaagaaagaaagaaacctgtctcagaaaacaacaacaaaaagtagtacc 440
Query: 241 catctcatttcctaatgacttttctatactaaccctgattctctcccccttcctctcctg 300
||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||
Sbjct: 441 catctcatttcctaatgacttttctatactaaccctgatcccctcccccttcctctcctg 500
Query: 301 tttctgttcctgtgtgtgtgtgtgt 325
|||||||||||||||||||||||||
Sbjct: 501 tttctgttcctgtgtgtgtgtgtgt 525
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 326
Length of database: 726
Length adjustment: 9
Effective length of query: 317
Effective length of database: 717
Effective search space: 227289
Effective search space used: 227289
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no059_j17.g1 MSMg01no059_j17.g1 CHROMAT_FILE:
MSMg01no059_j17.g1 PHD_FILE: MSMg01no059_j17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:02:09 2005
(567 letters)
>mm_chr11_32489564_32490530
Length = 967
Score = 890 bits (460), Expect = 0.0
Identities = 469/472 (99%)
Strand = Plus / Minus
Query: 7 aattcctggctcctgccaaggctccgggtgacagctggtctctgccctgaccatgtcagg 66
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 472 aattcctggctcctgccaaggctccgggtgacagctggtctctgccctgaccatgtcagg 413
Query: 67 caggccggatagcctggcacgggaggtgccatttacaggaagcaaccggtcccaagaggc 126
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 412 caggccggataccctggcacgggaggtgccatttacaggaagcaaccggtcccaagaggc 353
Query: 127 ttggggcctttgcaccttacagaagctccgtctcccaaacaaacgcgccatgctgaaagt 186
|||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||
Sbjct: 352 ttggggcctttgcaccttacagcagctccgtctcccaaacaaacacgccatgctgaaagt 293
Query: 187 gggccttgaggaaggccacacatttgattttgaaccagaagtgtggaaggaaagtcagaa 246
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 292 gggccttgaggaaggccacacatttgattttgaaccagaagtgtggaaggaaagtcagaa 233
Query: 247 tctcccatgcgatggatccacttctgttttgtttttctttttgagaaagggtctctctac 306
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 232 tctcccatgcgatggatccacttctgttttgtttttctttttgagaaagggtctctctac 173
Query: 307 ataacagctctggctggcctggaacttgctaagctcctggctggccttaaacttgcagtg 366
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 172 ataacagctctggctggcctggaacttgctaagctcctggctggccttaaacttgcagtg 113
Query: 367 atcctcttgcctctatgcaaaaccttgtgtctgtcccaggtgctggacttagaggtgtga 426
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 112 atcctcttgcctctatgcaaaaccttgtgtctgtcccaggtgctggacttagaggtgtga 53
Query: 427 gccaccacatctgagttcaccggacacatggagcattcctcacattgggcac 478
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 52 gccaccacatctgagttcaccggacacatggagcattcctcacattgggcac 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 567
Length of database: 967
Length adjustment: 10
Effective length of query: 557
Effective length of database: 957
Effective search space: 533049
Effective search space used: 533049
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
