ATCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCAGAGAACCGCGGAA
TTCTTTGTTTATCTCCGAGACCCATTTTTTTAATGGGGTTATTTGATTTT
CTGGAGTCTACCTTCTTGAGTTCTTTATATATATTGGATATTAGTCCCCT
ATCTGATTTAGGATAGGTAAACTAATTTCCCAATTTGTTGGTGGCCTTTT
TGTTTTATTGACGGTGTCTTTTGCCTTACACAAGCTTTGCAGTTTCATGA
GGTCCCATTTGTCAATTCTTGATCTTACAGCACAAGCCATTGCTGTTCTG
TTCAGGAATTTTTCCCCTGTGCCCTAATCTTCGAGTCTTTTCCCCACTTT
CTCCTCTATAAGTTTCAGTGTCTCCGGTTTTATGTGGGGCTCCTTGATCC
TCTTAGATTTGACCTTACCACAAGGAGATAGGAATGGATCGATTTGCATT
CTTCTACATGATAACTACCAGTTGTGCCATCGTTATTTGTTGATTATGTT
GTGTTTGTTCCTTTGTATGTGTTTATCTCCCTTGTTTTTATATTTTGGTG
TTCTTATTTGTCTTTTTTTCACCCTTANAACTCTGCCTCTTCCTCCTCTT
GCTATTATCTCTTCTTCTCCGTTCGCTTTTCCACTATTTTTTTCTCCACT
CCCTTTTCCTCCCATATACCCTTACTCCCTCTTTTCTCCTTTTCTCTTTC
CCTCCGCTC

CCATGAAGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXTGCAGACACAATGTACGCTTGCTGGTAACA
TAGTTTCCCACTAGGGCAGGTTAAGCACACTGAAGCTGCCTTACATGTTA
ATCCAACTGGACCCAACCCAGCGTGGATGGCAGATGGTAAGGGTCACATT
CCTGCTGCTGGAGACACACATTACAGAGAGGCAAGCAAGAAGGCGAAGGA
GTCACTGAACTGTATGAGAATCAGGGCTGTCAGTGTGGGGCCAGTTAAGC
TTAACACAGGTCGTTGTAGAAAGTTTTACACTACGTGTGTTGAACTGGGT
TAGTACAATGGATGCTTTTTGCTAGCTCCATCCACTGAGTCTCAAAGCAG
GCACACCTGAGCACCCATGAATGCAGACTGCACCCAGGTTCTCACACTGT
TTTCCAACAGGGGAGAGGGATAAGGGAGATGGCTAGACCTAGTACTGCTT
CAAGAAAGAAACAAAAATGAGAGGGCCGGCAGTCAGGAAACCCTCAGAAA
CAAATACTCAGAAAACACAGCAGTGAGGGCCTATCAGAGGAACGTGTGAA
CAGGCTCCCACCAGACCAAGCTGATCTGATTTCAGCAACTAAATAAATAG
GGTAACATTATTGTAACTCCAAATATAAATATAAAACCCCGCTGAC

Query= MSMg01no059_p18.g1 MSMg01no059_p18.g1 CHROMAT_FILE:
MSMg01no059_p18.g1 PHD_FILE: MSMg01no059_p18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:02:37 2005
         (520 letters)



>mm_chr11_65185841_65186760
          Length = 920

 Score =  897 bits (464), Expect = 0.0
 Identities = 506/520 (97%)
 Strand = Plus / Plus

                                                                       
Query: 1   tgcagacacaatgtacgcttgctggtaacatagtttcccactagggcaggttaagcacac 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgcagacacaatgtacgcttgctggtaacatagtttcccactagggcaggttaagcacac 260

                                                                       
Query: 61  tgaagctgccttacatgttaatccaactggacccaacccagcgtggatggcagatggtaa 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgaagctgccttacatgttaatccaactggacccaacccagcgtggatggcagatggtaa 320

                                                                       
Query: 121 gggtcacattcctgctgctggagacacacattacagagaggcaagcaagaaggcgaagga 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gggtcacattcctgctgctggagacacacattacagagaggcaagcaagaaggcgaagga 380

                                                                       
Query: 181 gtcactgaactgtatgagaatcagggctgtcagtgtggggccagttaagcttaacacagg 240
           ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| 
Sbjct: 381 gtcactgaactgtatgagaatcaaggctgtcagtgtggggccagttaagcttaacacaga 440

                                                                       
Query: 241 tcgttgtagaaagttttacactacgtgtgttgaactgggttagtacaatggatgcttttt 300
           || |||||||||||||||  ||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tcattgtagaaagttttatgctacgtgtgttgaactgggttagtacaatggatgcttttt 500

                                                                       
Query: 301 gctagctccatccactgagtctcaaagcaggcacacctgagcacccatgaatgcagactg 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gctagctccatccactgagtctcaaagcaggcacacctgagcacccatgaatgcagactg 560

                                                                       
Query: 361 cacccaggttctcacactgttttccaacaggggagagggataagggagatggctagacct 420
           |||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 561 cacccaggttctcacattgttttccaacaggggagagggataggggagatggctagacct 620

                                                                       
Query: 421 agtactgcttcaagaaagaaacaaaaatgagagggccggcagtcaggaaaccctcagaaa 480
           |||||||||| |||||| |||||||||||| |||| ||||||||||||||||||||||||
Sbjct: 621 agtactgctttaagaaacaaacaaaaatgaaagggtcggcagtcaggaaaccctcagaaa 680

                                                   
Query: 481 caaatactcagaaaacacagcagtgagggcctatcagagg 520
           |||||||||||||||| |||||| ||||||||||| ||||
Sbjct: 681 caaatactcagaaaactcagcagcgagggcctatctgagg 720


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 520
Length of database: 920
Length adjustment: 10
Effective length of query: 510
Effective length of database: 910
Effective search space:   464100
Effective search space used:   464100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)