Query= MSMg01no060_l15.b1 MSMg01no060_l15.b1 CHROMAT_FILE:
MSMg01no060_l15.b1 PHD_FILE: MSMg01no060_l15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:03:31 2005
(330 letters)
>mm_chr11_32283274_32284003
Length = 730
Score = 578 bits (299), Expect = e-169
Identities = 323/331 (97%), Gaps = 2/331 (0%)
Strand = Plus / Minus
Query: 1 tacgtaaccacaaaggcttttaagagccggggagagggtcgggctcaagttttctgcctt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 530 tacgtaaccacaaaggcttttaagagccggggagagggtcgggctcaagttttctgcctt 471
Query: 61 gggaggttttccagagctgactttctttcatccagaaaaaaagctacatcttactgctgc 120
|||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 470 gggaagttttccagagctgactttctttcatccag-aaaaaagctacatcttactgctgc 412
Query: 121 ctttctctttctcgaagaaaggctgttttttaggctgaacttaaacattctgctcattcc 180
|||||||||||| ||| ||||| ||| |||||||||||||||||||||||||||||||||
Sbjct: 411 ctttctctttcttgaaaaaaggttgtattttaggctgaacttaaacattctgctcattcc 352
Query: 181 agaatgactccaaaatacaaaactgagaacccccaaaggaaggg-cccccaactctcctt 239
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 351 agaatgactccaaaatacaaaactgagaacccccaaaggaagggccccccaactctcctt 292
Query: 240 tcttactgcctttgctaagagcctattctgtgccaggaactgaactttgggaagcagagt 299
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 291 tcttaccgcctttgctaagagcctattctgtgccaggaactgaactttgggaagcagagt 232
Query: 300 cgctgtcttatttagcagatgtggaaataga 330
|||||||||||||||||||||||||||||||
Sbjct: 231 cgctgtcttatttagcagatgtggaaataga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 330
Length of database: 730
Length adjustment: 9
Effective length of query: 321
Effective length of database: 721
Effective search space: 231441
Effective search space used: 231441
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no060_l15.g1 MSMg01no060_l15.g1 CHROMAT_FILE:
MSMg01no060_l15.g1 PHD_FILE: MSMg01no060_l15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:03:31 2005
(165 letters)
>mm_chr11_32150600_32151166
Length = 567
Score = 255 bits (132), Expect = 8e-73
Identities = 159/168 (94%), Gaps = 4/168 (2%)
Strand = Plus / Plus
Query: 1 tcacaacaggccacacggttccagaacaaacaacatatttgtgctatgctatttgctaaa 60
||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||
Sbjct: 201 tcacaacaggccacacggttccagaacaaacaacataaaagtgttatgctatttgctaaa 260
Query: 61 catctgtcagggatgaattatttcctagctaatctgttaatcagattaccactaggctcc 120
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 261 catctgtcagggatgaattatt-cctagctaatctgttaatcagattaccactaggctcc 319
Query: 121 tggccc-tgtctctc-caagcgtctactgc-tacctacactaactagg 165
|||||| |||||||| ||||| |||||||| |||||||||||||||||
Sbjct: 320 tggcccatgtctctcacaagcatctactgcatacctacactaactagg 367
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 165
Length of database: 567
Length adjustment: 8
Effective length of query: 157
Effective length of database: 559
Effective search space: 87763
Effective search space used: 87763
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
