Query= MSMg01no061_d15.b1 MSMg01no061_d15.b1 CHROMAT_FILE:
MSMg01no061_d15.b1 PHD_FILE: MSMg01no061_d15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:04:08 2005
(337 letters)
>mm_chr11_25250790_25251527
Length = 738
Score = 596 bits (308), Expect = e-175
Identities = 329/336 (97%), Gaps = 1/336 (0%)
Strand = Plus / Minus
Query: 3 gaattcatcctcctcca-aaatattatttaaatgcccatgatattctgggtaaaacaccc 61
||||||||||||| ||| ||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 538 gaattcatcctcccccacaaatattatctaaatgcccatgatattctgggtaaaacaccc 479
Query: 62 ttaggtgggtgattggtaaattacactctcagaatttatgactttaagaagacactaagt 121
|||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 478 ttaggtaggtgattggtaaattacactctcagaatgtatgactttaagaagacactaagt 419
Query: 122 tttcaaatggttcggaactgaccttagactgcctgttgatgaccaagcattcatgaactg 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 418 tttcaaatggttcggaactgaccttagactgcctgttgatgaccaagcattcatgaactg 359
Query: 182 agagtttacttcattctgtacattgcatctgtttgctgattttttaaattcaattctatt 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 358 agagtttacttcattctgtacattgcatctgtttgctgattttttaaattcaattctatt 299
Query: 242 gttttttttttacatctgtcagcacgtcaataatttgttataattttaagaaaatgcatt 301
| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 298 gctttttttttacatctgtcagcacgtcaataatttgttataattttaagaaaatacatt 239
Query: 302 taaaaaataatagtaaggcaagaaaagaaaaaatga 337
||||||||||||||||||||||||||||||||||||
Sbjct: 238 taaaaaataatagtaaggcaagaaaagaaaaaatga 203
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 337
Length of database: 738
Length adjustment: 9
Effective length of query: 328
Effective length of database: 729
Effective search space: 239112
Effective search space used: 239112
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no061_d15.g1 MSMg01no061_d15.g1 CHROMAT_FILE:
MSMg01no061_d15.g1 PHD_FILE: MSMg01no061_d15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:04:09 2005
(242 letters)
>mm_chr11_25088106_25088747
Length = 642
Score = 453 bits (234), Expect = e-132
Identities = 240/242 (99%)
Strand = Plus / Plus
Query: 1 tctttgttttggggtctcatggaaaggttttcctgtatattccaggtttcctttgattct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tctttgttttggggtctcatggaaaggttttcctgtatattccaggtttcctttgattct 260
Query: 61 cttgacttgatatatatttatattgcaggcatgtaccaccatacatttctggctctacag 120
| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cctgacttgacatatatttatattgcaggcatgtaccaccatacatttctggctctacag 320
Query: 121 aagtcagacttgtaccaccaacaggcaaagttattacttcatcaatttttttgagatagg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aagtcagacttgtaccaccaacaggcaaagttattacttcatcaatttttttgagatagg 380
Query: 181 gtcttatcatatagttctagatggccttggacttggtatgtagaccaggcctggccctga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gtcttatcatatagttctagatggccttggacttggtatgtagaccaggcctggccctga 440
Query: 241 ac 242
||
Sbjct: 441 ac 442
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 242
Length of database: 642
Length adjustment: 9
Effective length of query: 233
Effective length of database: 633
Effective search space: 147489
Effective search space used: 147489
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
