Query= MSMg01no063_f22.b1 MSMg01no063_f22.b1 CHROMAT_FILE:
MSMg01no063_f22.b1 PHD_FILE: MSMg01no063_f22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:07:42 2005
(309 letters)
>mm_chr11_45527726_45528436
Length = 711
Score = 551 bits (285), Expect = e-161
Identities = 300/305 (98%), Gaps = 2/305 (0%)
Strand = Plus / Plus
Query: 5 gaattct-aatcc-aatacttcttcacatccttctatcagtgtaaacgttgtgtaaccca 62
||||||| ||||| ||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctcaatccaaatacttctccacatccttctatcagtgtaaacgttgtgtaaccca 264
Query: 63 gttctgctttccgagacataggttctcccgtggtgaaaatggtaggacagtctgagatca 122
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 gttctgctttcggagacataggttctcccgtggtgaaaatggtaggacagtctgagatca 324
Query: 123 gaaaattttaatctaccatcctaagagatttaggtaatcactattcccagcagacaaatg 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gaaaattttaatctaccatcctaagagatttaggtaatcactattcccagcagacaaatg 384
Query: 183 ccccatctcaatgaagcacgcacgaactcatgcccatgcgcctgtgggaagagacggagg 242
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ccccatctcaatgaagcatgcacgaactcatgcccatgcgcctgtgggaagagacggagg 444
Query: 243 tacaaggctgttttgtatgtcctacttctgaatatcatttgtttcctggcctcaagaaaa 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 tacaaggctgttttgtatgtcctacttctgaatatcatttgtttcctggcctcaagaaaa 504
Query: 303 aaaaa 307
|||||
Sbjct: 505 aaaaa 509
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 309
Length of database: 711
Length adjustment: 9
Effective length of query: 300
Effective length of database: 702
Effective search space: 210600
Effective search space used: 210600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no063_f22.g1 MSMg01no063_f22.g1 CHROMAT_FILE:
MSMg01no063_f22.g1 PHD_FILE: MSMg01no063_f22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:07:42 2005
(281 letters)
>mm_chr11_45702692_45703372
Length = 681
Score = 543 bits (281), Expect = e-159
Identities = 281/281 (100%)
Strand = Plus / Minus
Query: 1 taactctccaaatctgcagcctttagaactacaactatgcccagcagctccaagctgctc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 taactctccaaatctgcagcctttagaactacaactatgcccagcagctccaagctgctc 422
Query: 61 tgagtagcaggagcgcccgagtactggtgcatctgaggagcctctgaatgagtctggagt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tgagtagcaggagcgcccgagtactggtgcatctgaggagcctctgaatgagtctggagt 362
Query: 121 aaggtgaagactgcaacgatgtaaaacccaaacaccatgatctgcactggtgcttgtctg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 aaggtgaagactgcaacgatgtaaaacccaaacaccatgatctgcactggtgcttgtctg 302
Query: 181 gagctcggtggagatggaattatggacacaaagaaattgcctatctccatctccaaactt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gagctcggtggagatggaattatggacacaaagaaattgcctatctccatctccaaactt 242
Query: 241 aacttaaaaagccaaactgggatggagagaactcacatgag 281
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 aacttaaaaagccaaactgggatggagagaactcacatgag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 281
Length of database: 681
Length adjustment: 9
Effective length of query: 272
Effective length of database: 672
Effective search space: 182784
Effective search space used: 182784
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
