Query= MSMg01no063_o05.b1 MSMg01no063_o05.b1 CHROMAT_FILE:
MSMg01no063_o05.b1 PHD_FILE: MSMg01no063_o05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:08:26 2005
(567 letters)
>mm_chr11_110374934_110375901
Length = 968
Score = 1056 bits (546), Expect = 0.0
Identities = 561/566 (99%), Gaps = 1/566 (0%)
Strand = Plus / Minus
Query: 3 agggaaagaaaaaataaatatgaata-tttttttcttccctttttatcaacacgctgtct 61
|||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||
Sbjct: 768 agggaaagaaaaaataaatatggatattttttttcttccctttttatcaacacgctgtct 709
Query: 62 aggaattccaatagtaattgccttatagtaacactgtaacaaagcaaacattcctcatta 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 708 aggaattccaatagtaattgccttatagtaacactgtaacaaagcaaacattcctcatta 649
Query: 122 tctagcaaatatctaccttttccctgtcattcacaatacttcttaatcttagaggacgat 181
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 648 tctagcaaatatctaccttttccctgtcattcacaatacttcttaatcttagaggacgct 589
Query: 182 tagagaactcatgacgtctttaatcacaagaattcagtccacctgcaagagcttgagagt 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 588 tagagaactcatgacgtctttaatcacaagaattcagtccacctgcaagagcttgagagt 529
Query: 242 ggagggagctactccatggtattatactaagacatggtctgagcctgtgacaacttggca 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 528 ggagggagctactccatggtattatactaagacatggtctgagcctgtgacaacttggca 469
Query: 302 gtctgtcccaaggctcttcattaagttttcatttcattaaagactactggtgtgtatctt 361
|||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||
Sbjct: 468 gtctgtcccaaggctcttcattaagttttcatttcattaaagactactggcgtttatctt 409
Query: 362 ctcttatcacagcccttctaacaataagacttcttcattggatgtgagaaccaaccagca 421
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 408 ctcttatcacagcccttctaacaataagacttcttcattggatgtgagaaccaaccagca 349
Query: 422 aggcaggatagttcatgcgttacagaagcaggccttggggagtatccattgaggaggcac 481
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 348 aggcaggatagttcatgcgttacagaagcaggccttggggagtatccattgaggaggcac 289
Query: 482 aagagcagaaaacctcatttctcactgtgagcttccatatctcctctcatgacttatcag 541
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 288 aagagcagaaaacctcatttctcactgtgagcttccatatctcctctcatgacttatcag 229
Query: 542 gtgtccttttaactaatagaggtgtt 567
||||||||||||||||||||||||||
Sbjct: 228 gtgtccttttaactaatagaggtgtt 203
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 567
Length of database: 968
Length adjustment: 10
Effective length of query: 557
Effective length of database: 958
Effective search space: 533606
Effective search space used: 533606
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no063_o05.g1 MSMg01no063_o05.g1 CHROMAT_FILE:
MSMg01no063_o05.g1 PHD_FILE: MSMg01no063_o05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:08:26 2005
(291 letters)
>mm_chr11_110249037_110249727
Length = 691
Score = 518 bits (268), Expect = e-151
Identities = 283/288 (98%)
Strand = Plus / Plus
Query: 1 caggatagccagggatacacacagagagacaaactgtgtctcaagaaactaaaatgaaag 60
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 201 caggatagccagggatacacacagagagacaaaccgtgtctcaagaaactaaaatgaaag 260
Query: 61 caaagcaaacttgaatagctcctccactctaccaagctaaaatcagactcggtttgactc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 caaagcaaacttgaatagctcctccactctaccaagctaaaatcagactcggtttgactc 320
Query: 121 ccacagtactgaccaaaacagcaggcagctagagatacagagatgagcagaacagtctac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ccacagtactgaccaaaacagcaggcagctagagatacagagatgagcagaacagtctac 380
Query: 181 ttgacctttgtggtttgtattgctctaaaagttctagtaagaggactggaaagaggcttc 240
||||||||||||||| ||||||||| ||||||||||||||||||||||||||| ||||||
Sbjct: 381 ttgacctttgtggttcgtattgctccaaaagttctagtaagaggactggaaaggggcttc 440
Query: 241 aggatggactcctgaagaatgctgaatggaatacagcctgcagtcttg 288
||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 441 aggatggactcctgaagaacgctgaatggaatacagcctgcagtcttg 488
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 291
Length of database: 691
Length adjustment: 9
Effective length of query: 282
Effective length of database: 682
Effective search space: 192324
Effective search space used: 192324
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
