Query= MSMg01no065_m17.b1 MSMg01no065_m17.b1 CHROMAT_FILE:
MSMg01no065_m17.b1 PHD_FILE: MSMg01no065_m17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:11:24 2005
(342 letters)
>mm_chr11_79993911_79994652
Length = 742
Score = 601 bits (311), Expect = e-176
Identities = 335/347 (96%), Gaps = 9/347 (2%)
Strand = Plus / Minus
Query: 1 gcctggctgtcctagaagtagacctgtagaccagtctgatctc-aatacacagagatcgg 59
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 650 gcctggctgtcctagaagtagacctgtagaccagtctgatctcaaatacacagagatcgg 591
Query: 60 ccagcctctgcctccgggagtgctggaattagaggcaggcaccaccactaccttcaggct 119
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 590 ccagcctctgcctccgggagtgctggaattagaggcaggcaccaccactacctccaggct 531
Query: 120 cttttgcaacgttttatgtaatcttttttgtatctgttctggtttggtaaatacttttat 179
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 530 tttttgcaacgttttatgtaatcttttttgtatctgttctggtttggtaaatacttttat 471
Query: 180 cctagtatctcctttggtcagtattgttccctgcaaaaccaaggacaaactccaccactg 239
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 470 cctagtatctcctttggtcagtattgttccctgcaaaaccaaggacaaacgccaccactg 411
Query: 240 aaggcc----tttttttcaatccctcccatgaactttgaaacaatgtctcaccaggttgg 295
|||||| ||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 410 aaggccacacttt----caatccctcccatgaactttgaaacaatgtctcaccaggttgg 355
Query: 296 tgttctcagactctttggctcaaatggttctgcctgaaccccctgag 342
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 354 tgttctcagactctttggctcaaatggttctgcctgaaccccctgag 308
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 342
Length of database: 742
Length adjustment: 9
Effective length of query: 333
Effective length of database: 733
Effective search space: 244089
Effective search space used: 244089
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no065_m17.g1 MSMg01no065_m17.g1 CHROMAT_FILE:
MSMg01no065_m17.g1 PHD_FILE: MSMg01no065_m17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:11:24 2005
(159 letters)
>mm_chr11_79806203_79806761
Length = 559
Score = 284 bits (147), Expect = 1e-81
Identities = 156/159 (98%)
Strand = Plus / Plus
Query: 1 agttcatagaggcgtccgggcccgcggtcggcagcgcgcacggtccaaccaagccgcgcc 60
|||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 201 agttcaaagaggcgtccgggcccgcggtcggcagcgcgcacgggccaaccaagccgcgcc 260
Query: 61 tccgcgagaagcgcctccgcgtgactgacggtggactctgcggaccaacgggctgggcgg 120
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 261 tccgcgagaagcgcctccgcgtgactgacgggggactctgcggaccaacgggctgggcgg 320
Query: 121 cccggcggcgcgcgctcccgccggccaatcagagcgccg 159
|||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cccggcggcgcgcgctcccgccggccaatcagagcgccg 359
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 159
Length of database: 559
Length adjustment: 8
Effective length of query: 151
Effective length of database: 551
Effective search space: 83201
Effective search space used: 83201
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
