Query= MSMg01no066_e02.b1 MSMg01no066_e02.b1 CHROMAT_FILE:
MSMg01no066_e02.b1 PHD_FILE: MSMg01no066_e02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:11:59 2005
(248 letters)
>mm_chr11_8295408_8296055
Length = 648
Score = 369 bits (191), Expect = e-107
Identities = 242/277 (87%), Gaps = 30/277 (10%)
Strand = Plus / Minus
Query: 1 atctccaaacgatatgtgaaaagggtggacacacacgtgatgagacacaaccagccttct 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 596 atctccaaacgatatgtgaaaagggtggacacacacgtgatgagacacaaccagtcttct 537
Query: 61 gagctcctgaactgacgttagccatatgaaacaagtc----------caa--cctgtata 108
||||||||||||||||||||||||||||||||||||| ||| | | ||||
Sbjct: 536 gagctcctgaactgacgttagccatatgaaacaagtcaggtaacttgcaatgcatttata 477
Query: 109 tatatac------------------aaacaaaaaacaacccagctttggcctattctaac 150
||||||| ||| |||||||||||||||||||||||||||||||
Sbjct: 476 tatatacacacacacacacacacaaaaaaaaaaaacaacccagctttggcctattctaac 417
Query: 151 aatatatattttgattgcatgtgaggaagcctggtgttagcaatttcccatttgttttgg 210
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 416 aatatatattttgattgcatgtgaggaagcctggtgctagcaatttcccatttgttttgg 357
Query: 211 gtatatccttatcataatcctcacagagctgcagctg 247
|||||||||||||||||||||||||||||||||||||
Sbjct: 356 gtatatccttatcataatcctcacagagctgcagctg 320
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 248
Length of database: 648
Length adjustment: 9
Effective length of query: 239
Effective length of database: 639
Effective search space: 152721
Effective search space used: 152721
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no066_e02.g1 MSMg01no066_e02.g1 CHROMAT_FILE:
MSMg01no066_e02.g1 PHD_FILE: MSMg01no066_e02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:11:59 2005
(301 letters)
>mm_chr11_8144041_8144741
Length = 701
Score = 551 bits (285), Expect = e-161
Identities = 297/301 (98%)
Strand = Plus / Plus
Query: 1 aaggttttgagtgtctgatcacagcaatcagatgagtttttcaaagctgaaagactacat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aaggttttgagtgtctgatcacagcaatcagatgagtttttcaaagctgaaagactacat 260
Query: 61 aggctctccagcagaacccaatgttttaccttctacagaagaatggatggcagggttact 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 261 aggctctccagcagaacccaatgttttaccttctacagaagaatggatggcagggttgct 320
Query: 121 tgcagtttccatctgcaccccagagctgaccctatgccacagctctccaaacccaaatcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgcagtttccatctgcaccccagagctgaccctatgccacagctctccaaacccaaatcc 380
Query: 181 cactggtagaaagctggtctcccaggagtactgaaacacctgagaacacaggtgagacca 240
|||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 381 cactgggagaaagctggtctcccaggagtactgaaacacctgagagcacaggtgagacca 440
Query: 241 ccacttctgtttaaatacctggcccaagagagacctacctggagccctcaggacacagga 300
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ccacttctgttcaaatacctggcccaagagagacctacctggagccctcaggacacagga 500
Query: 301 a 301
|
Sbjct: 501 a 501
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 301
Length of database: 701
Length adjustment: 9
Effective length of query: 292
Effective length of database: 692
Effective search space: 202064
Effective search space used: 202064
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
