Query= MSMg01no066_h04.b1 MSMg01no066_h04.b1 CHROMAT_FILE:
MSMg01no066_h04.b1 PHD_FILE: MSMg01no066_h04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:12:14 2005
(428 letters)
>mm_chr11_8001668_8002495
Length = 828
Score = 766 bits (396), Expect = 0.0
Identities = 420/428 (98%)
Strand = Plus / Plus
Query: 1 atccctgaaggaaaccaaaattaaatgtaggcatgaaatgcagcaaactttctcatagtg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atccctgaaggaaaccaaaattaaatgtaggcatgaaatgcagcaaactttctcatagtg 260
Query: 61 aggtaaggaaggaaggtggagtttgggaaagcatttcctggaaacatttttaactgcagg 120
||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||
Sbjct: 261 aggtaaggaaggaaggtggagtttgggaaagcatttcctggaaacgtttttaagtgcagg 320
Query: 121 accaataaaaatgatcagttcaatggtaactgccctgcaaagagaagagaccctgcaggc 180
|||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 321 accaatgaaaatgatcagttcaatggtaactgccctgcaaagagaagaggccctgcaggc 380
Query: 181 tcacacagccctgtgttactaagcaaaatctttcattaacacaaaagttctattaacatt 240
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tcacacagccctgtgtaactaagcaaaatctttcattaacacaaaagttctattaacatt 440
Query: 241 ccctgcgaggttaatgcaatacacggcaactaaacaaagtaaacgtagagtaaggagcag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 441 ccctgcgaggttaatgcaatacacggcaactaaacaaagtaaacgtagagtaaagagcag 500
Query: 301 tcgcagtcgggggtggagaaattaaactaattgcttttaatcacaaaaaaatacagccca 360
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tcgcagtcgggggaggagaaattaaactaattgcttttaatcacaaaaaaatacagccca 560
Query: 361 ggttgagtcatcactaaaatggggtaattttcataagcattgagtactcttcaaatgttt 420
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ggttgagtcatcactaaaacggggtaattttcataagcattgagtactcttcaaatgttt 620
Query: 421 gaaggatt 428
||||||||
Sbjct: 621 gaaggatt 628
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 428
Length of database: 828
Length adjustment: 9
Effective length of query: 419
Effective length of database: 819
Effective search space: 343161
Effective search space used: 343161
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no066_h04.g1 MSMg01no066_h04.g1 CHROMAT_FILE:
MSMg01no066_h04.g1 PHD_FILE: MSMg01no066_h04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:12:14 2005
(243 letters)
>mm_chr11_8132959_8133601
Length = 643
Score = 462 bits (239), Expect = e-135
Identities = 242/243 (99%)
Strand = Plus / Minus
Query: 1 tccagggcaggctctatgatatatcagcatctgtgttttctgagatctgcatgagagcag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 tccagggcaggctctatgatatatcagcatctgtgttttctgagatctgcatgagagcag 384
Query: 61 agggacaaagtatacatcttggccttccctatcatagtgatgctcaatgcagtctgagaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 agggacaaagtatacatcttggccttccctatcatagtgatgctcaatgcagtctgagaa 324
Query: 121 tgtatcccaggcctgagctggggcacggtggccagtgtggtagttaattcacttctgata 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 tgtatcccaggcctgagctggggcacggtggccagtgtggtagttaattcacttctgata 264
Query: 181 tgaaacaacataacatctttcttcactggagtgtgttgagaaataaaacagtgtggcgaa 240
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 tgaaacaacataacgtctttcttcactggagtgtgttgagaaataaaacagtgtggcgaa 204
Query: 241 tct 243
|||
Sbjct: 203 tct 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 243
Length of database: 643
Length adjustment: 9
Effective length of query: 234
Effective length of database: 634
Effective search space: 148356
Effective search space used: 148356
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
