Query= MSMg01no070_k09.b1 MSMg01no070_k09.b1 CHROMAT_FILE:
MSMg01no070_k09.b1 PHD_FILE: MSMg01no070_k09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:17:47 2005
(295 letters)
>mm_chr11_68158420_68159113
Length = 694
Score = 503 bits (260), Expect = e-147
Identities = 278/284 (97%), Gaps = 1/284 (0%)
Strand = Plus / Minus
Query: 1 ctgtctgtctgtccctcactggtgagataggggttgagattcctgacttgatgccaagag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 483 ctgtctgtctgtccctcactggtgagataggggttgagattcctgacttgatgccaagag 424
Query: 61 ccaaaccatcatttactgttcaggtactaaagccacccaaccactcctgccccccagagc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 ccaaaccatcatttactgttcaggtactaaagccacccaaccactcctgccccccagagc 364
Query: 121 ttggggctgtgtcacaatgcctcagtgcctcccaggacttccagcccactggggatactg 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 ttggggctgtgtcacaatgcctcagtgcctcccaggacttccagcccactggggatactt 304
Query: 181 cataagtgtttattaactgtgtgagtaaacagacaagttgaaaagggcttgtactccttt 240
| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 303 cgtaagtgtttattaactgtgtgagtaaacagacaagttgaaaagggtttgtactccttt 244
Query: 241 ggcgtgaatataggtcaagttatgttctgttttttttgtttttt 284
|||||||||| |||||||||||||||||| |||||| |||||||
Sbjct: 243 ggcgtgaatagaggtcaagttatgttctgctttttt-gtttttt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 295
Length of database: 694
Length adjustment: 9
Effective length of query: 286
Effective length of database: 685
Effective search space: 195910
Effective search space used: 195910
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no070_k09.g1 MSMg01no070_k09.g1 CHROMAT_FILE:
MSMg01no070_k09.g1 PHD_FILE: MSMg01no070_k09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:17:47 2005
(402 letters)
>mm_chr11_68005494_68006295
Length = 802
Score = 762 bits (394), Expect = 0.0
Identities = 400/402 (99%)
Strand = Plus / Plus
Query: 1 tcctgtatctataggctctttatttagtcatttttacacacatgcagtgttggaggattt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcctgtatctataggctctttatttagtcatttttacacacatgcagtgttggaggattt 260
Query: 61 cgtgaaccttttgaaatccgttttcatgatacagctggggaagagtaagggagagaaagt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cgtgaaccttttgaaatccgttttcatgatacagctggggaagagtaagggagagaaagt 320
Query: 121 ttcctagaaaagcctggcggccagctccagctttgctgagaatggtcaggcccaagaatg 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 321 ttcctagaaaagcctggcggccagctccagctttgctgagaatggtcaggcccaaggatg 380
Query: 181 ggaggctgcccagcactgaccagaggcctctcccatgctgccttggtgcacagcaggaga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ggaggctgcccagcactgaccagaggcctctcccatgctgccttggtgcacagcaggaga 440
Query: 241 tctcgcattcattcgcatgtgcatatgtcatggacctcccattgctgtacaggtggaagg 300
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cctcgcattcattcgcatgtgcatatgtcatggacctcccattgctgtacaggtggaagg 500
Query: 301 tgacatactatgacatatcacgaagatgatgggtaagagagctcagactacctcacggtg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tgacatactatgacatatcacgaagatgatgggtaagagagctcagactacctcacggtg 560
Query: 361 tccacttaaaagctaatgacctttgaacttttctcatgtgat 402
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tccacttaaaagctaatgacctttgaacttttctcatgtgat 602
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 402
Length of database: 802
Length adjustment: 9
Effective length of query: 393
Effective length of database: 793
Effective search space: 311649
Effective search space used: 311649
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
