Query= MSMg01no072_c07.b1 MSMg01no072_c07.b1 CHROMAT_FILE:
MSMg01no072_c07.b1 PHD_FILE: MSMg01no072_c07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:19:47 2005
(601 letters)
>mm_chr11_72021757_72022757
Length = 1001
Score = 1091 bits (564), Expect = 0.0
Identities = 585/592 (98%)
Strand = Plus / Plus
Query: 10 gaattcatatttaccgcttatgttcaaccacatatcatcattaatgaattgggtctggaa 69
|||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 210 gaattcatatttacagtttatgttcaaccacatatcatcattaatgaattgggtctggaa 269
Query: 70 taagttcagaactctattgactttacatttgttttatcttagccacactttaaactttgc 129
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 270 taagttcagaactctattgactttacatttgttttatcttagccacactttaaactttgc 329
Query: 130 agaaagtgagacataagttacagttctcaaaatgtttaaaggttaacaaaagcagtggtt 189
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 330 agaaagtgacacataagttacagttctcaaaatgtttaaaggttaacaaaagcagtggtt 389
Query: 190 acaagtatattatatataggtcagctgttgagtaaactgtaatgaaccaagtagtatttt 249
|||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||
Sbjct: 390 acaagtatattatatataagtcaactgttgagtaaactgtaatgaaccaagtagtatttt 449
Query: 250 tcattatctgtttcattttggaacagctggaaagacccaaataatgacttcagacaaaaa 309
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 450 tcattatctgtttcattttggaacagctggaaagacccaaataatgacttcagacaaaaa 509
Query: 310 ctgaaaataaccgcagtgcctacactacttaaatatggaacagtaagtgtctacctttat 369
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 510 ctgaaaataaccgcagtgcctacactacttaaatatggaacagtaagtgtctacctttat 569
Query: 370 gtttgtagctataatgtagttaaaactcaagttgttttttgagtcaagtttgaaaagatc 429
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 570 gtttgtagctataatgtagttaaaactcaagttgttttttgagtcaagtttgaaaagatc 629
Query: 430 ttgacctttgatttccaacatcacattgttgtttagagtgcatcagaaacacacaagttg 489
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 630 ttgacctttgatttccaacatcacattgttgttcagagtgcatcagaaacacacaagttg 689
Query: 490 gtgtccattcctctgccaatcctgacaaactattaataatgcagatattagtgtctgggg 549
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 690 gtgtccattcctctgccaatcctgacaaactattaataatgcagatattagtgtctgggg 749
Query: 550 tgtatttttaagccacttttaagattctgtctttagaagaaagttgactcat 601
||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 750 tgtatttttaagccacttttaagattctgtcttcagaagaaagttgactcat 801
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 601
Length of database: 1001
Length adjustment: 10
Effective length of query: 591
Effective length of database: 991
Effective search space: 585681
Effective search space used: 585681
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no072_c07.g1 MSMg01no072_c07.g1 CHROMAT_FILE:
MSMg01no072_c07.g1 PHD_FILE: MSMg01no072_c07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:19:47 2005
(425 letters)
>mm_chr11_72128830_72129655
Length = 826
Score = 733 bits (379), Expect = 0.0
Identities = 403/415 (97%), Gaps = 9/415 (2%)
Strand = Plus / Minus
Query: 1 atgggatgtgctcacacctgatgacataataagtatttgcacatcttgaacttgtaaact 60
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 408 atgggatgtgctcacacctgatgacataataagtacttgcacatcttgaacttgtaaact 349
Query: 61 ctgtttaacaaaccaaactaaccctttcccccaccaagaagac--tgattgtatgtaaac 118
|||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||
Sbjct: 348 ctgtttaacaaaccaaactaaccc-ttcccccaccaagaagactttgattgtatgtaaac 290
Query: 119 taactgtccaaggttatgagcctcgactggggatagcatggatctgaagaagttaatctg 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 289 taactgtccaaggttatgagcctcgactggggatagcatggatctgaagaagttaatctg 230
Query: 179 gaaaaatgaaaacaaaaatgccgaatcaagagctgggatatagcttggtaatagagtgct 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 229 gaaaaatgaaaacaaaaatgccgaatcaagagctgggatatagcttggtaatagagtgct 170
Query: 239 tgtccagcacaccctgagcttagggtttaatccctagcactgcataaactcggcacgggg 298
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 169 tgtccagcacaccctgagcttagggtttaatccctagcactgcataaactcggcatgggg 110
Query: 299 tgcttcccagaacagtgtgtgtgtgtgtgtgtgtgctgggaagggggacttgctaaatca 358
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 109 tgcttcccagaaca------gtgtgtgtgtgtgtgctgggaagggggacttgctaaatca 56
Query: 359 aaccccatcaaagtcacaggctagaagactatgttggtgggctacagatgtggtg 413
||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 55 aaccccaacaaagtcacaggctagaagactatgttggtgggctacagatgtggtg 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 425
Length of database: 826
Length adjustment: 9
Effective length of query: 416
Effective length of database: 817
Effective search space: 339872
Effective search space used: 339872
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
