Query= MSMg01no072_p12.b1 MSMg01no072_p12.b1 CHROMAT_FILE:
MSMg01no072_p12.b1 PHD_FILE: MSMg01no072_p12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:20:53 2005
(466 letters)
>mm_chr11_113678133_113678998
Length = 866
Score = 855 bits (442), Expect = 0.0
Identities = 457/462 (98%)
Strand = Plus / Plus
Query: 5 gaattccacagcctttacactgctatgaacacctgaagctatgggagggctacgtaagag 64
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattccacagcctttagactgctatgaacacctgaagctatgggagggctacgtaagag 264
Query: 65 gtcaccacagcacatgcatctagggaactacaacagggcaatgactcacggtcacgctgg 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 gtcaccacagcacatgcatctagggaactacaacagggcaatgactcacggtcacgctgg 324
Query: 125 cccaatgtttccctcccatagctgtgatccctgcaggaggaatccgcccgcccgcccgcc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 cccaatgtttccctcccatagctgtgatccctgcaggaggaatccgcccgcccgcccgcc 384
Query: 185 tgcctgggaccgtgagggacttcactgctatcatggcaatgccagtttgttgttgttggg 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tgcctgggaccgtgagggacttcactgctatcatggcaatgccagtttgttgttgttggg 444
Query: 245 ggagggaggcaactctggaatggaacctgtggccttgtgcatgataaacagctgttctct 304
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 445 ggagggaggcaactctggaatggaacccgtggccttgtgcatgataaacagctgttctct 504
Query: 305 ggtttagtcactttctcagcccttgtttgttttagttactgacacagtctcatgcagcct 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 ggtttagtcactttctcagcccttgtttgttttagttactgacacagtctcatgcagcct 564
Query: 365 ggaactacccatgtggttgaggaggactttgagctcttgatccccctgcctccaccttca 424
||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 ggaactagctatgtggttgaggaggactttgagctcttgatccccctgcctccaccttca 624
Query: 425 gaaaactggtattatgggtgtgctttgccacaatcaagttat 466
|||||||||||||||||||||| |||||||||||||||||||
Sbjct: 625 gaaaactggtattatgggtgtgttttgccacaatcaagttat 666
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 466
Length of database: 866
Length adjustment: 10
Effective length of query: 456
Effective length of database: 856
Effective search space: 390336
Effective search space used: 390336
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no072_p12.g1 MSMg01no072_p12.g1 CHROMAT_FILE:
MSMg01no072_p12.g1 PHD_FILE: MSMg01no072_p12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:20:53 2005
(240 letters)
>mm_chr11_113809462_113810101
Length = 640
Score = 447 bits (231), Expect = e-130
Identities = 237/239 (99%), Gaps = 1/239 (0%)
Strand = Plus / Minus
Query: 1 tcctcatacgttgaaagtccttattatgtatttgggtttatttctagaatctgagaccac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 tcctcatacgttgaaagtccttattatgtatttgggtttatttctagaatctgagaccac 323
Query: 61 cctttcatcaaacttagcataaagaccacattgtttgagtgggtgcagttctgcttacac 120
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 322 cctttcatcaaacttagcataaagaccacactgtttgagtgggtgcagttctgcttacac 263
Query: 121 tttaatagctagggtagtctttctcccattgtccagacttttgtgttttggcttggtttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 tttaatagctagggtagtctttctcccattgtccagacttttgtgttttggcttggtttt 203
Query: 181 agatttttaaaaaaatatgttatttttttaagtggtgtgtgtgtgtgtgtgtgtgtgtg 239
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 202 agatttttaaaaaaatatgtta-ttttttaagtggtgtgtgtgtgtgtgtgtgtgtgtg 145
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 240
Length of database: 640
Length adjustment: 9
Effective length of query: 231
Effective length of database: 631
Effective search space: 145761
Effective search space used: 145761
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
