Query= MSMg01no075_b14.b1 MSMg01no075_b14.b1 CHROMAT_FILE:
MSMg01no075_b14.b1 PHD_FILE: MSMg01no075_b14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:23:40 2005
(211 letters)
>mm_chr11_7112086_7112697
Length = 612
Score = 383 bits (198), Expect = e-111
Identities = 204/206 (99%), Gaps = 1/206 (0%)
Strand = Plus / Plus
Query: 7 gaattctagccttcacatgttcagggcaagaacttgactc-cataactaagcgagactgg 65
||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 207 gaattctagccttcagatgttcagggcaagaacttgactcacataactaagcgagactgg 266
Query: 66 ctaggaatgctggccatttagagcaacagctaagaatgctggccatttagagcaacagct 125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 ctaggaatgctggccatttagagcaacagctaagaatgctggccatttagagcaacagct 326
Query: 126 gccaaatccatttaaatgtttctgttttgttttgttttttccttaaaggaacgaaggatg 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 gccaaatccatttaaatgtttctgttttgttttgttttttccttaaaggaacgaaggatg 386
Query: 186 cccttagagtgactgcctgcttggta 211
||||||||||||||||||||||||||
Sbjct: 387 cccttagagtgactgcctgcttggta 412
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 211
Length of database: 612
Length adjustment: 9
Effective length of query: 202
Effective length of database: 603
Effective search space: 121806
Effective search space used: 121806
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no075_b14.g1 MSMg01no075_b14.g1 CHROMAT_FILE:
MSMg01no075_b14.g1 PHD_FILE: MSMg01no075_b14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:23:40 2005
(162 letters)
>mm_chr11_7198900_7199461
Length = 562
Score = 304 bits (157), Expect = 2e-87
Identities = 160/161 (99%)
Strand = Plus / Minus
Query: 1 caagaaagctagctcaagacagaaaggaaagccaagtttacactccatatgtgggctcaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 caagaaagctagctcaagacagaaaggaaagccaagtttacactccatatgtgggctcaa 302
Query: 61 attaaagggcccatttcatgttccaagtcagtgcaaactatattctgagtttaagaatca 120
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 attaaagggcccatttcattttccaagtcagtgcaaactatattctgagtttaagaatca 242
Query: 121 gtgtacttgctcagctggatcatttcagatagttgtgaaaa 161
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gtgtacttgctcagctggatcatttcagatagttgtgaaaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 162
Length of database: 562
Length adjustment: 8
Effective length of query: 154
Effective length of database: 554
Effective search space: 85316
Effective search space used: 85316
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
