Query= MSMg01no075_p09.b1 MSMg01no075_p09.b1 CHROMAT_FILE:
MSMg01no075_p09.b1 PHD_FILE: MSMg01no075_p09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:24:46 2005
(345 letters)
>mm_chr11_8244536_8245280
Length = 745
Score = 634 bits (328), Expect = 0.0
Identities = 340/344 (98%)
Strand = Plus / Plus
Query: 1 agtgtctagttggaggccttcggagaacatcagttcttgggtctccataatatcacctcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agtgtctagttggaggccttcggagaacatcagttcttgggtctccataatatcacctcc 260
Query: 61 acatcagcctgtcacatccctgaacagcactcacctggcctctcaggcttcactgggtaa 120
||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||
Sbjct: 261 acatcagcctgtcacatccatgaacggcactcacctggcctctcaggcttcactgggtaa 320
Query: 121 caatgttaattgtatcttttttaaaaaccacagcagtttctaggttggtatctgagcata 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 caatgttaattgtatcttttttaaaaaccacagcagtttctaggttggtatctgagcata 380
Query: 181 aaattagatattgtgacttcttcaagatgatgcataaaactaaccattgctctgcctgtg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aaattagatattgtgacttcttcaagatgatgcataaaactaaccattgctctgcctgtg 440
Query: 241 caaaatgtctctgagggaacagcgctgcttcaggtggcctcccctgacagctgtgggcac 300
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 caaaatgtcactgagggaacagcgctgcttcaggtggcctcccctgacagctgtgggcac 500
Query: 301 tacccaagtcctcaccttgcttgagctgctccacggaagccttg 344
||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 501 tacccaagtcctcaccttgctcgagctgctccacggaagccttg 544
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 345
Length of database: 745
Length adjustment: 9
Effective length of query: 336
Effective length of database: 736
Effective search space: 247296
Effective search space used: 247296
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no075_p09.g1 MSMg01no075_p09.g1 CHROMAT_FILE:
MSMg01no075_p09.g1 PHD_FILE: MSMg01no075_p09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:24:46 2005
(241 letters)
>mm_chr11_8397942_8398582
Length = 641
Score = 435 bits (225), Expect = e-126
Identities = 237/241 (98%)
Strand = Plus / Minus
Query: 1 ctgggaatcctttgatcctgcagggccagggtgagccagagtgggtcttaccttttctac 60
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ctgggaaccctttgatcctgcagggccagggtgagccagagtgggtcttaccttttctac 382
Query: 61 ctcatgagaacgtgaaagcagctaccacaaggaccccagaacctagataggtgtttgttt 120
|||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||
Sbjct: 381 ctcatgagaacgtgaaagcagctaccacaaggactctagaacctagataggtgtttgttt 322
Query: 121 gacagtgtcatttttggaggtctggatgaagaacatgagtttctgtaacatgttttcaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gacagtgtcatttttggaggtctggatgaagaacatgagtttctgtaacatgttttcaaa 262
Query: 181 tgagaaccacagtgtaaggagctctctgtgtcagggataatggatgtctttcatgctcag 240
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 261 tgagaaccacagtgtaaggagctctctgtgtcagagataatggatgtctttcatgctcag 202
Query: 241 c 241
|
Sbjct: 201 c 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 241
Length of database: 641
Length adjustment: 9
Effective length of query: 232
Effective length of database: 632
Effective search space: 146624
Effective search space used: 146624
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
