AATCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATCCGCGGA
ATTCCTTTTCCTCGTTCAAGAAACCCAACAGACGCTGCTCTCATACCCTC
ATTCCCCTCAGGAATTCGCTTTTATCATAATTAGATTAAAGTTCCTGAGG
TTCTATCCAACCAACAGTATATGTTAGCAGGATTCTTAGCAAATACTTTT
CCCAAGCCTGTAATTTGGGTCCTAATGCAGCCAGCTCATCCTGGGGATTT
ATAGCAATGACTACTGTCTGGTTCATCGTCAGGCCTAAAAAGCCTTCTAA
TGGCTCACAGAGGCCCTAAGTGCTGTTTGCAAAGGCCTGAAATTGGGGCT
AATGGTATTTTGAACAGGAAGCCATCCTCTGCACTAATCCCACACTGGGT
TCATTTTGTCTGCTGAGGTCACGCAGGACCCTGCTCAGAATGGTGGCCAG
TTGGGTCACTTTCAGTGAGTCTTACTGGAAAGCGCTTGGCACGGTCTCCT
GTGAAGCTGAAAAGAGAGTGGTATCAATTTCTTAATACTTCAAAATAAAT
TAGCCAAACACCATCTTCACCTTCCTCTTAACTGGAGCTCTTGCTAATGG
CTTCATCAGTTTGGCGTACAGTTGGTAGGAAGCATTTGGATGAGCCAGTG
ACTCCCTATTCTGTGTTCAGGGTACA

TCATGATAGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXAAAGTAGACACCTCCCTGATAGTGAA
GGCTCTGGGTGGCATTATTTATGAAGTCAAGAAGCGGTTACAACCAGATG
TCCATCACCTAAATGACCAAGTGATCTGTGATACTTCACACAATGGAGTA
TTATTCAACTGTGACCTTGAAAATTGTATGCTAAATAAAAATAGGTAGAA
ACAAAGACCACATATTTCATGACTCTGGTGATGTGCAAGGTTGAACACAG
GCAAATCTTTAGGGATGGGAGATAGACTAGCAGTTGCTCTTCAGCTGAGG
TGAACGGAGATCTGATGAGGGCTCTGCAGTGAATGGTAGCAGGCAACTTT
GGGGGCAATGAAAGTGTTGTGGAATGAGGTAGAGGTGATGGCTGCACAAC
CCAGTGGCTATACAAACATCTAATTACACATTTTTATAATGGACAGATTG
ATTTATTCAGTATAAGTGATGATAAGATGGCACATATGCCGACAGTAAAT
TCCCATTATCAAGCATACTGCTTTCGTATGACTAGAATACATACCACTAC
CCAAATGACATATCATTCTATCGAACGATTTTCCCCTCTAATTCCTATTG
CAATCCTTACTGGCCATTTCTTCGATTACTC

Query= MSMg01no078_f02.b1 MSMg01no078_f02.b1 CHROMAT_FILE:
MSMg01no078_f02.b1 PHD_FILE: MSMg01no078_f02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:26:37 2005
         (558 letters)



>mm_chr11_63418117_63419075
          Length = 959

 Score = 1017 bits (526), Expect = 0.0
 Identities = 547/554 (98%), Gaps = 1/554 (0%)
 Strand = Plus / Plus

                                                                       
Query: 6   cggaattccttttcctcgttcaa-gaaacccaacagacgctgctctcataccctcattcc 64
           |||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 206 cggaattccttttccttgttcaaagaaacccaacagacgctgctctcataccctcattcc 265

                                                                       
Query: 65  cctcaggaattcgcttttatcataattagattaaagttcctgaggttctatccaaccaac 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 cctcaggaattcgcttttatcataattagattaaagttcctgaggttctatccaaccaac 325

                                                                       
Query: 125 agtatatgttagcaggattcttagcaaatacttttcccaagcctgtaatttgggtcctaa 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 agtatatgttagcaggattcttagcaaatacttttcccaagcctgtaatttgggtcctaa 385

                                                                       
Query: 185 tgcagccagctcatcctggggatttatagcaatgactactgtctggttcatcgtcaggcc 244
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 tgcagccagctcatcccggggatttatagcaatgactactgtctggttcatcgtcaggcc 445

                                                                       
Query: 245 taaaaagccttctaatggctcacagaggccctaagtgctgtttgcaaaggcctgaaattg 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 taaaaagccttctaatggctcacagaggccctaagtgctgtttgcaaaggcctgaaattg 505

                                                                       
Query: 305 gggctaatggtattttgaacaggaagccatcctctgcactaatcccacactgggttcatt 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 gggctaatggtattttgaacaggaagccatcctctgcactaatcccacactgggttcatt 565

                                                                       
Query: 365 ttgtctgctgaggtcacgcaggaccctgctcagaatggtggccagttgggtcactttcag 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 566 ttgtctgctgaggtcacgcaggaccctgctcagaatggtggccagttgggtcactttcag 625

                                                                       
Query: 425 tgagtcttactggaaagcgcttggcacggtctcctgtgaagctgaaaagagagtggtatc 484
           ||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||
Sbjct: 626 tgagtcttactggaaagcgcttggcacggtctcctatgacgctgaaaagagagtggtatc 685

                                                                       
Query: 485 aatttcttaatacttcaaaataaattagccaaacaccatcttcaccttcctcttaactgg 544
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 686 aatttcttaatacttcaaaataaattagccaaacaccatcttcaccttcctcttaactgt 745

                         
Query: 545 agctcttgctaatg 558
           ||||||| ||||||
Sbjct: 746 agctcttactaatg 759


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 558
Length of database: 959
Length adjustment: 10
Effective length of query: 548
Effective length of database: 949
Effective search space:   520052
Effective search space used:   520052
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)