Query= MSMg01no079_n24.b1 MSMg01no079_n24.b1 CHROMAT_FILE:
MSMg01no079_n24.b1 PHD_FILE: MSMg01no079_n24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:28:37 2005
(477 letters)
>mm_chr11_8244540_8245417
Length = 878
Score = 893 bits (462), Expect = 0.0
Identities = 474/478 (99%), Gaps = 1/478 (0%)
Strand = Plus / Plus
Query: 1 tctagttggaggccttcggagaa-atcagttcttgggtctccataatatcacctccacat 59
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 201 tctagttggaggccttcggagaacatcagttcttgggtctccataatatcacctccacat 260
Query: 60 cagcctgtcacatccctgaacagcactcacctggcctctcaggcttcactgggtaacaat 119
||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cagcctgtcacatccatgaacggcactcacctggcctctcaggcttcactgggtaacaat 320
Query: 120 gttaattgtatcttttttaaaaaccacagcagtttctaggttggtatctgagcataaaat 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gttaattgtatcttttttaaaaaccacagcagtttctaggttggtatctgagcataaaat 380
Query: 180 tagatattgtgacttcttcaagatgatgcataaaactaaccattgctctgcctgtgcaaa 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tagatattgtgacttcttcaagatgatgcataaaactaaccattgctctgcctgtgcaaa 440
Query: 240 atgtcactgagggaacagcgctgcttcaggtggcctcccctgacagctgtgggcactacc 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 atgtcactgagggaacagcgctgcttcaggtggcctcccctgacagctgtgggcactacc 500
Query: 300 caagtcctcaccttgcttgagctgctccacggaagccttggagtgacgggctggcgccag 359
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 caagtcctcaccttgctcgagctgctccacggaagccttggagtgacgggctggcgccag 560
Query: 360 cctgtgtaaccagccctaaacagccatgctagctcaaggatccacttaaggacacccttc 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 cctgtgtaaccagccctaaacagccatgctagctcaaggatccacttaaggacacccttc 620
Query: 420 agaactggctctcaattcaagtgtttttctctcaatttgtttgttttgctcgctagtc 477
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 agaactggctctcaattcaagtgtttttctctcaatttgtttgttttgctcgctagtc 678
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 477
Length of database: 878
Length adjustment: 10
Effective length of query: 467
Effective length of database: 868
Effective search space: 405356
Effective search space used: 405356
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no079_n24.g1 MSMg01no079_n24.g1 CHROMAT_FILE:
MSMg01no079_n24.g1 PHD_FILE: MSMg01no079_n24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:28:37 2005
(439 letters)
>mm_chr11_8397748_8398586
Length = 839
Score = 775 bits (401), Expect = 0.0
Identities = 425/433 (98%)
Strand = Plus / Minus
Query: 7 aattctgggaatcctttgatcctgcagggccagggtgagccagagtgggtcttacctttt 66
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 639 aattctgggaaccctttgatcctgcagggccagggtgagccagagtgggtcttacctttt 580
Query: 67 ctacctcatgagaacgtgaaagcagctaccacaaggaccccagaacctagataggtgttt 126
|||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||
Sbjct: 579 ctacctcatgagaacgtgaaagcagctaccacaaggactctagaacctagataggtgttt 520
Query: 127 gtttgacagtgtcatttttggaggtctggatgaagaacatgagtttctgtaacatgtttt 186
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 519 gtttgacagtgtcatttttggaggtctggatgaagaacatgagtttctgtaacatgtttt 460
Query: 187 caaatgagaaccacagtgtaaggagctctctgtgtcagggataatggatgtctttcatgc 246
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 459 caaatgagaaccacagtgtaaggagctctctgtgtcagagataatggatgtctttcatgc 400
Query: 247 tcagctcaggtccctacaggtctccaacagtgaggtctaggctcctatttggcttggttg 306
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 399 tcagctcaggtccctacaggtctccaacagtgaggtctaggctcctatttggcttggttg 340
Query: 307 gcaacagtgagtctggccagtgctcatgcctaagtttcttttctagtcagggcgctcttg 366
||||||||||| |||||||||||||||||||||||||||||||||||||||| | |||||
Sbjct: 339 gcaacagtgagactggccagtgctcatgcctaagtttcttttctagtcagggtgttcttg 280
Query: 367 gtgtcttgacaatttttgggttctcttagacgcaccaacattcagatgggatggcctttg 426
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 279 gtgtcttggcaatttttgggttctcttagacgcaccaacattcagatgggatggcctttg 220
Query: 427 ttccctgtataac 439
|||||||||||||
Sbjct: 219 ttccctgtataac 207
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 439
Length of database: 839
Length adjustment: 9
Effective length of query: 430
Effective length of database: 830
Effective search space: 356900
Effective search space used: 356900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
