Query= MSMg01no080_j15.b1 MSMg01no080_j15.b1 CHROMAT_FILE:
MSMg01no080_j15.b1 PHD_FILE: MSMg01no080_j15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:29:33 2005
(293 letters)
>mm_chr11_5936587_5937279
Length = 693
Score = 489 bits (253), Expect = e-143
Identities = 283/293 (96%)
Strand = Plus / Plus
Query: 1 ttaggctaaggggacacatgtggctttctgtgatcagagcaggcctgttgcctggcaaaa 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttaggctaaggggacacatgtggctttctgtgatcagagcaggcctgttgcctggcaaag 260
Query: 61 cttacatgtgcgccaatggttgtacacaggagcctggttatgtcacctcatgacttcaag 120
|||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||
Sbjct: 261 cttacatgtgcgccaatggttgtacacaggagcccgtttatgtcacctcatgacttcaag 320
Query: 121 tgctgtgggcgcaggatgtctttattctggtgatgaccctccatgacctgctctcacgaa 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 321 tgctgtgggcgcaggatgtctttattctggtgatgaccctccatgacctgctctcatgaa 380
Query: 181 cctgaattaaaagctcggtctcacaggctgtagcacttctcagtctaacccctccctgcc 240
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cctgtattaaaagctcggtctcacaggctgtagcacttctcagtctaacccctccctgcc 440
Query: 241 gtatctgtactgtctagttatcctggtctgtggttatcctgttggtctcgagg 293
||| ||| ||||||||||||||||||||||||||| ||||| ||||||||||
Sbjct: 441 gtagctggactgtctagttatcctggtctgtggttgtcctgggggtctcgagg 493
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 293
Length of database: 693
Length adjustment: 9
Effective length of query: 284
Effective length of database: 684
Effective search space: 194256
Effective search space used: 194256
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no080_j15.g1 MSMg01no080_j15.g1 CHROMAT_FILE:
MSMg01no080_j15.g1 PHD_FILE: MSMg01no080_j15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:29:34 2005
(320 letters)
>mm_chr11_6118043_6118762
Length = 720
Score = 596 bits (308), Expect = e-175
Identities = 317/320 (99%)
Strand = Plus / Minus
Query: 1 cctaatcagtaagtggttggtctccccgacaccctggcttgttccttctctgctttctct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 520 cctaatcagtaagtggttggtctccccgacaccctggcttgttccttctctgctttctct 461
Query: 61 ctccactcctgttctctcttcctgcatgctctgtttctgcagctaacaaagccaggggag 120
||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 460 ctccattcctcttctctcttcctgcatgctctgtttctgcagctaacaaagccaggggag 401
Query: 121 gctccagtgcaagggtaaggaaggagtccccagcagactcattggctccacctcctcctc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 400 gctccagtgcaagggtaaggaaggagtccccagcagactcattggctccacctcctcctc 341
Query: 181 tccactgtctggcctcaggtcttatgtggctattgctgcatcctcctgggtagatgactt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340 tccactgtctggcctcaggtcttatgtggctattgctgcatcctcctgggtagatgactt 281
Query: 241 catcgactggctgaccccatcctcctcctgctgccgcatttatacccgtgccccccataa 300
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 280 catcgactggctgaccccatcctcctcctgctgccgcatttatacccgtggcccccataa 221
Query: 301 agatgagttctgtccctcaa 320
||||||||||||||||||||
Sbjct: 220 agatgagttctgtccctcaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 320
Length of database: 720
Length adjustment: 9
Effective length of query: 311
Effective length of database: 711
Effective search space: 221121
Effective search space used: 221121
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
