Query= MSMg01no081_p24.b1 MSMg01no081_p24.b1 CHROMAT_FILE:
MSMg01no081_p24.b1 PHD_FILE: MSMg01no081_p24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:31:23 2005
(131 letters)
>mm_chr11_62939945_62940475
Length = 531
Score = 238 bits (123), Expect = 1e-67
Identities = 129/131 (98%)
Strand = Plus / Plus
Query: 1 tttgattcatatgaaatgctcagggtgatccttggtcttaataggatggcttggtaaata 60
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tttgattcgtatgaaatgctcagggtgatccttggtcttaataggatggcttggtaaata 260
Query: 61 caaatggctaatgctattaatttagtccatgacttctgaatggagtgatcactcctgaga 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 taaatggctaatgctattaatttagtccatgacttctgaatggagtgatcactcctgaga 320
Query: 121 gactcaaactc 131
|||||||||||
Sbjct: 321 gactcaaactc 331
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 131
Length of database: 531
Length adjustment: 8
Effective length of query: 123
Effective length of database: 523
Effective search space: 64329
Effective search space used: 64329
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no081_p24.g1 MSMg01no081_p24.g1 CHROMAT_FILE:
MSMg01no081_p24.g1 PHD_FILE: MSMg01no081_p24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:31:23 2005
(246 letters)
>mm_chr11_63060557_63061203
Length = 647
Score = 431 bits (223), Expect = e-125
Identities = 241/247 (97%), Gaps = 1/247 (0%)
Strand = Plus / Minus
Query: 1 gtctctgttgtagagtttatctggctttgtgtgtggctttttttacccac-ttagggaac 59
||||||||||||||||||||||||||||||||||||||||||||| || |||||||||
Sbjct: 447 gtctctgttgtagagtttatctggctttgtgtgtggctttttttagatacattagggaac 388
Query: 60 aatatagaaagaccatccatattaaatatctaaaactattcaggggaaggaagagagaga 119
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 aatatagaaggaccatccatattaaatatctaaaactattcaggggaaggaagagagaga 328
Query: 120 gaatttttacaacactatatttgtgcacttcctttgtgggaagcttccagtcaatgtctt 179
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 gaatttttacaacgctatatttgtgcacttcctttgtgggaagcttccagtcaatgtctt 268
Query: 180 tgaagcctgcccttatgatacatgataggtgacagagtcaggcagtgagccttggggtcc 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 tgaagcctgcccttatgatacatgataggtgacagagtcaggcagtgagccttggggtcc 208
Query: 240 tctttga 246
|||||||
Sbjct: 207 tctttga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 246
Length of database: 647
Length adjustment: 9
Effective length of query: 237
Effective length of database: 638
Effective search space: 151206
Effective search space used: 151206
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
