Query= MSMg01no082_b01.b1 MSMg01no082_b01.b1 CHROMAT_FILE:
MSMg01no082_b01.b1 PHD_FILE: MSMg01no082_b01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:31:27 2005
(629 letters)
>mm_chr11_70579125_70580153
Length = 1029
Score = 1116 bits (577), Expect = 0.0
Identities = 613/625 (98%), Gaps = 1/625 (0%)
Strand = Plus / Minus
Query: 6 aattccattactcatctggcacaaagcccacctcctccggaagtcctcactaacatctgc 65
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 697 aattccattactcatctggcacaaggcccacctcctccggaagtcctcactaacatctgc 638
Query: 66 aggaaggagtccttggtcctctgaagccggttttcccctcgcccccttctcacctttcct 125
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 637 aggaaggagtccttggtcctctgaagccagttttcccctcgcccccttctcacctttcct 578
Query: 126 taactacagtttccatgttacttcctgtttgttgctcttttcgagaccttaagaatgaat 185
||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||
Sbjct: 577 taactacagtttccatgttacttcctgtttgttgctcttttcgaggccttcagaatgaat 518
Query: 186 acttcctacagctcacaatgctctcctaatcgtggccgtttcccttccccacatcctacc 245
||||||||| |||||||| |||||||||||||||||||||||| ||||||||||||||||
Sbjct: 517 acttcctacggctcacaaagctctcctaatcgtggccgtttcctttccccacatcctacc 458
Query: 246 tcacagtcttcaacaacaaccggcagctgcaggtgtgctcagtgtcctgcaggccaaaca 305
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 457 tcacagtcttcaacaacaaccggcagctgcaggtgtgctcagtgtcctgcaggccaaaca 398
Query: 306 ctgtccattctttaaagtttctcggccttcggaaacaaatcattctcacttcctggactt 365
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 397 ctgtccattctttaaagtttctctgccttcggaaacaaatcattctcacttcctggactt 338
Query: 366 agcaaacatcttcgcgatgcagctgatatggacagtcccctccatcctctttctgatctg 425
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 337 agcaaacatcttcgcgatgcagctgatatggacagtcccctccatcctctttctgatctg 278
Query: 426 caggccccaacaagtgttacttcttcatgcagacatcatgccaccgcattatgcatttgc 485
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 277 caggccccaacaagcgttacttcttcatgcagacatcatgccaccgcattatgcatttgc 218
Query: 486 ttttctctagggcagcggttctcaaccttcctagtgcctcttcaacctcatagtacacac 545
|||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||
Sbjct: 217 ttttctctagggcagcggttctcaaccttcctagtgccacttcaaccccatagtacacac 158
Query: 546 gttgtggtgacctccgaccataaaattattttcattgcgtcttcataattataattttgc 605
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 157 gttgtggtgacctccgaccataaaattattttcattgcgtcttcataattataattttgc 98
Query: 606 cattacgagt-gtagtgtatatatt 629
|||||||||| ||||||||||||||
Sbjct: 97 cattacgagtggtagtgtatatatt 73
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 629
Length of database: 1029
Length adjustment: 10
Effective length of query: 619
Effective length of database: 1019
Effective search space: 630761
Effective search space used: 630761
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no082_b01.g1 MSMg01no082_b01.g1 CHROMAT_FILE:
MSMg01no082_b01.g1 PHD_FILE: MSMg01no082_b01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:31:27 2005
(605 letters)
>mm_chr11_70502973_70503977
Length = 1005
Score = 1170 bits (605), Expect = 0.0
Identities = 605/605 (100%)
Strand = Plus / Plus
Query: 1 tcttaaagctcttaactatgctgcctctctctaatccctgcttggcttgcagaggcccat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcttaaagctcttaactatgctgcctctctctaatccctgcttggcttgcagaggcccat 260
Query: 61 gccacgcctccttactcattgatgattccctggcgccttctcaggtcctccagatgataa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gccacgcctccttactcattgatgattccctggcgccttctcaggtcctccagatgataa 320
Query: 121 gtaactgctctaactcgggctggaatgcttccaggtcccttctgcattctttccaaatgc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtaactgctctaactcgggctggaatgcttccaggtcccttctgcattctttccaaatgc 380
Query: 181 agcttctttctctttcttctccaaagcttctcaggaggagggagcccctcaagagggtgc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agcttctttctctttcttctccaaagcttctcaggaggagggagcccctcaagagggtgc 440
Query: 241 aggctaggccgggagcaatcagtggccctctgtgtcaagaaggaagaatagttgctaaat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aggctaggccgggagcaatcagtggccctctgtgtcaagaaggaagaatagttgctaaat 500
Query: 301 atagatagatgtcagtttcagggaaacttgggctggagaatctggggttttttggaagct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 atagatagatgtcagtttcagggaaacttgggctggagaatctggggttttttggaagct 560
Query: 361 taggtatgatctagaaaacaggatacttgatttacaataaaaacagggcctggttagtat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 taggtatgatctagaaaacaggatacttgatttacaataaaaacagggcctggttagtat 620
Query: 421 actggttgggaaataccagagagaaatggtaataaggataggaaggcagtgggtataatt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 actggttgggaaataccagagagaaatggtaataaggataggaaggcagtgggtataatt 680
Query: 481 ttaacagaaggctgagaagcagtttgtcctaccagaattggtggaatgtactgttctacc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ttaacagaaggctgagaagcagtttgtcctaccagaattggtggaatgtactgttctacc 740
Query: 541 atccaattggagctgagaagaacaaaaacaggagctggagtcagaaaggacactctgata 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 atccaattggagctgagaagaacaaaaacaggagctggagtcagaaaggacactctgata 800
Query: 601 aatat 605
|||||
Sbjct: 801 aatat 805
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 605
Length of database: 1005
Length adjustment: 10
Effective length of query: 595
Effective length of database: 995
Effective search space: 592025
Effective search space used: 592025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
