TCTCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGC
GGAATTCAAGGTCATCCTTGGCTATACAGTGAGTTCATGAGTTCAAGGCC
ACCCCGAGATAGATGAGACCTTGCCTCAAAAGAATGAAGGGAATGTGTGG
TAGTACAACCTTTGATCCCAGCACTCAGGAGGCAGAAACAGGTCTTTATG
AGTTTAGGGCCAGCCTGGGATACATTAAGAGTTTCAATCAAGTCAGAGAT
ATATAGTGAGGCTGTATGTATGTATGTATGTATGTATGTATGTATGTATC
GCACCCTCTACCCTTTTTTCCTTTTCTTTTTTTAATATTTATCTTTCCTT
CTTCTTTGCTCTTTACTCTCCTCCCCCTCGCCTCTCCTATCTCTAACTTA
CTTATTTATTTATTCTCCTTCCACCCCCATCTACAAATTAACATAATTAT
AATTATTTATATTAACAAATTACACTATACCTTATTATTTTAATAATAGC
CCATCCTTAATTACTTCTTTCTCCTTCGCTCTGTATTTCTCTATACTGTT
TCGCGTGCCGCCTCCTCATTTCTTCTCTATTCCTTCTGATCAATCCATTT
AAACAGTCATAACATAGCTAGGCTTCCTCTATGACCAACAATCTTCATGT
TTTACTTAATCATACTTTTACACCTTTGCTTGTATACCTATATACTACAA
TACCCCAGATAAGATG

NTCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXAAGGCCAGCCTTGGCTACACGACAC
CCTGTTTAAAGGAAAGAAGCTGAGGAAAAAGAAGGGAAAGAGAGGTCCAG
AACAGGTAAAGCCCTAAAAATGGACGGTAAGCTTCTATTAGGTTCGTCAG
AGCGACACTGAATACAGGGTATTTCTAGAGACTAATATAACATTCTAGAA
TTCATACATCATGATGTTTAATTAAACATTTAATTGTTATTTTATGCTAC
AGATTTGGGTGTTTTGCCTCTATGTGTATGTGTGTGTACACAATGTGTGT
ACAATGTGTGTGCCTGGTGACGATGGAGGCCAGAGAGGGTGTAGAACTGG
AGTTACTGGGGTCTGTGAGCTGCCATGTATGTGGGTGCCGGGAATTGAAC
CCCCATCCTCTGGAAGAACAGCCAGTTCTCTTAACCTCTGAGCCGTCCCT
CTAGCCCTATGGCTAAACAAATTTATAAGTAAGCTAAAAAACACTGAATG
AAAGCTGGGCATGGTGGCACATGGGAGGCAGAGGCAGGCGGATTTCTGAG
TTCAAGGCCAGCCTGGTCTACCAAGAGAGTTCCCAGGACAGCCAGGGCTA
CACTGAGAAAACCTGTCTCGAAAAAAAAAC

Query= MSMg01no083_a03.g1 MSMg01no083_a03.g1 CHROMAT_FILE:
MSMg01no083_a03.g1 PHD_FILE: MSMg01no083_a03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:32:37 2005
         (502 letters)



>mm_chr11_79890554_79891455
          Length = 902

 Score =  911 bits (471), Expect = 0.0
 Identities = 500/521 (95%), Gaps = 19/521 (3%)
 Strand = Plus / Plus

                                                                       
Query: 1   aaggccagccttggctacacgacaccctgtttaaaggaaagaagctgaggaaaaagaagg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aaggccagccttggctacacgacaccctgtttaaaggaaagaagctgaggaaaaagaagg 260

                                                                       
Query: 61  gaaagagaggtccagaacaggtaaagccctaaaaatggacggtaagcttctattaggttc 120
           |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 261 gaaagagaggtccagaacaggtaaagccctaaaaatggacggtaggcttctattaggttc 320

                                                                       
Query: 121 gtcagagcgacactgaatacagggtatttctagagactaatataacattctagaattcat 180
           |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtcagagcaacactgaatacagggtatttctagagactaatataacattctagaattcat 380

                                                                       
Query: 181 acatcatgatg-----------tttaattaaacatttaa--------ttgttattttatg 221
           |||||||||||           |||||||||||||||||        |||||||||||||
Sbjct: 381 acatcatgatggctatataatgtttaattaaacatttaaacatttaattgttattttatg 440

                                                                       
Query: 222 ctacagatttgggtgttttgcctctatgtgtatgtgtgtgtacacaatgtgtgtacaatg 281
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ctacagatttgggtgttttgcctctatgtgtatgtgtgtgtacacaatgtgtgtacaatg 500

                                                                       
Query: 282 tgtgtgcctggtgacgatggaggccagagagggtgtagaactggagttactggggtctgt 341
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tgtgtgcctggtgacgatggaggccagagagggtgtagaactggagttactggggtctgt 560

                                                                       
Query: 342 gagctgccatgtatgtgggtgccgggaattgaacccccatcctctggaagaacagccagt 401
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gagctgccatgtatgtgggtgccgggaattgaacccccatcctctggaagaacagccagt 620

                                                                       
Query: 402 tctcttaacctctgagccgtccctctagccctatggctaaacaaatttataagtaagcta 461
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tctcttaacctctgagccgtccctctagccctatggctaaacaaatttataagtaagcta 680

                                                    
Query: 462 aaaaacactgaatgaaagctgggcatggtggcacatgggag 502
           |||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 aaaaacactgaatgaaagctgggcatggtggcacatgggag 721


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 502
Length of database: 902
Length adjustment: 10
Effective length of query: 492
Effective length of database: 892
Effective search space:   438864
Effective search space used:   438864
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)