Query= MSMg01no085_b13.b1 MSMg01no085_b13.b1 CHROMAT_FILE:
MSMg01no085_b13.b1 PHD_FILE: MSMg01no085_b13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:35:24 2005
(279 letters)
>mm_chr11_4613581_4614259
Length = 679
Score = 501 bits (259), Expect = e-146
Identities = 274/279 (98%)
Strand = Plus / Plus
Query: 1 gtaccctaggctagctttgaactctgatcctcttgtctccacctactatgctggcatttc 60
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gtaccctaggccagctttgaactctgatcctcttgtctccacctactatgctggcatttc 260
Query: 61 aggcctgaatcacccaccacacctagcatttgttgtgtttttgtgagatggtcctgctgt 120
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aggcatgaatcacccaccacacctagcatttgttgtgtttttgtgagatggtcctgctgt 320
Query: 121 tgctcagactggccttaaactgctgggatcaagtggtcctcttacctcagtcactgtcaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgctcagactggccttaaactgctgggatcaagtggtcctcttacctcagtcactgtcaa 380
Query: 181 gtagtttagtgactggtaccagccattgttttgtggctcacaccctgttcacaatactcc 240
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 381 gtagtttagtgactggtaccagccattgaagtgtggctcacaccctgttcacaatactcc 440
Query: 241 caacagtggtctctctatggaccatttagggaccaaaat 279
|||||||||||||||||||||||||||||||||||||||
Sbjct: 441 caacagtggtctctctatggaccatttagggaccaaaat 479
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 279
Length of database: 679
Length adjustment: 9
Effective length of query: 270
Effective length of database: 670
Effective search space: 180900
Effective search space used: 180900
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no085_b13.g1 MSMg01no085_b13.g1 CHROMAT_FILE:
MSMg01no085_b13.g1 PHD_FILE: MSMg01no085_b13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:35:24 2005
(199 letters)
>mm_chr11_4755175_4755776
Length = 602
Score = 375 bits (194), Expect = e-109
Identities = 199/202 (98%), Gaps = 3/202 (1%)
Strand = Plus / Minus
Query: 1 tctgaagcctacggttttccctggagcacactcagatttctgtgaaacctctaagtcagg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 402 tctgaagcctacggttttccctggagcacactcagatttctgtgaaacctctaagtcagg 343
Query: 61 acggcaggactgagagccattttccgta---gctgctgctgctgctcattcctaggtctc 117
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 342 acggcaggactgagagccattttccgtagctgctgctgctgctgctcattcctaggtctc 283
Query: 118 taaggccacccagaattccttgttctgtggcctcatgggttgtttaaaacgtaaatatct 177
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 282 taaggccacccagaattccttgttctgtggcctcatgggttgtttaaaacgtaaatatct 223
Query: 178 gctttctggctaacaggagtac 199
||||||||||||||||||||||
Sbjct: 222 gctttctggctaacaggagtac 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 199
Length of database: 602
Length adjustment: 8
Effective length of query: 191
Effective length of database: 594
Effective search space: 113454
Effective search space used: 113454
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
