Query= MSMg01no086_b07.b1 MSMg01no086_b07.b1 CHROMAT_FILE:
MSMg01no086_b07.b1 PHD_FILE: MSMg01no086_b07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:37:40 2005
(281 letters)
>mm_chr11_92835795_92836474
Length = 680
Score = 453 bits (234), Expect = e-132
Identities = 270/286 (94%), Gaps = 10/286 (3%)
Strand = Plus / Minus
Query: 1 caaattcttcactgatccacgattggctgttggcacggattgacttgccttatgcaagcc 60
||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||
Sbjct: 534 caaattcttcactgatccacgattggctgttggcatggattgacttgtcttatgcaagcc 475
Query: 61 ttgtgtggacaaccacagctactgagaactcatgtcggtaatttttttttgtaatttgtt 120
||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||
Sbjct: 474 ttgtgtggacaaccacagctactgagaactcatgtaggtaa-ttttttttgtaatttgtt 416
Query: 121 tgttttgtcattatatcactaatagtttatttttcaacaaaataatctcaatatatatat 180
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 415 tgttttgtcattatatcactaatagtttatttttcaacaaaatagtctcaatatatatat 356
Query: 181 ttcttccctttctaaattccttcttcttgaccactttgttctggttttgaaaagaagcct 240
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 355 ttcttccctttctaaattccttcttcttgaccacttttttctggttttgaaaagaagcct 296
Query: 241 tattaataga-----tttattaaaggattttaatatttaatttaaa 281
|| || ||| | ||||||||||||||||||||||||||||
Sbjct: 295 ta--aaaagaagaaat--attaaaggattttaatatttaatttaaa 254
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 281
Length of database: 680
Length adjustment: 9
Effective length of query: 272
Effective length of database: 671
Effective search space: 182512
Effective search space used: 182512
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no086_b07.g1 MSMg01no086_b07.g1 CHROMAT_FILE:
MSMg01no086_b07.g1 PHD_FILE: MSMg01no086_b07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:37:40 2005
(297 letters)
>mm_chr11_92746186_92746883
Length = 698
Score = 542 bits (280), Expect = e-158
Identities = 292/296 (98%), Gaps = 1/296 (0%)
Strand = Plus / Plus
Query: 2 aagtcttctctagatcagatggaaataccc-atgtgcttggcctacttctacacagaatt 60
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 202 aagtcttctctagatcagatggaaataccccatgtgcttggcctacttctacacagaatt 261
Query: 61 aatgaaggtttggtcagctaccttttgaccaatgccgaattatgcaagtaactaaacaca 120
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 aatgaaggcttggtcagctaccttttgaccaatgccgaattatgcaagtaactaaacaca 321
Query: 121 gcctttaaaagcaacatatctgtaaatgctctgcaaagagaagaggacttaagagaaatg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 gcctttaaaagcaacatatctgtaaatgctctgcaaagagaagaggacttaagagaaatg 381
Query: 181 atgcagggctggagatatggctcggctgttaaaggctagactcacaaccagaaatataag 240
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 382 atgcagggctggagatatggctcagctgttaaaggctagactcacaaccagaaatataag 441
Query: 241 aaaaatgatgcagaagtgaaaattcatagactaaggctgaggacagacttttttcc 296
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 442 aaaaatgatgcagaagtgaaaattcatagactaaggctgaggacagacatttttcc 497
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 297
Length of database: 698
Length adjustment: 9
Effective length of query: 288
Effective length of database: 689
Effective search space: 198432
Effective search space used: 198432
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
