Query= MSMg01no087_i23.b1 MSMg01no087_i23.b1 CHROMAT_FILE:
MSMg01no087_i23.b1 PHD_FILE: MSMg01no087_i23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:39:44 2005
(568 letters)
>mm_chr11_111490375_111491343
Length = 969
Score = 984 bits (509), Expect = 0.0
Identities = 554/569 (97%), Gaps = 1/569 (0%)
Strand = Plus / Plus
Query: 1 attttccccagcattgagactacacatgcacactgctgctcttgaggctgctttcttggt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 attttccccagcattgagactacacatgcacactgctgctcttgaggctgctttcttggt 260
Query: 61 ggttggttgtttatgtggctctggcaatcaaacccaggtccccacaccaactttaaggac 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggttggttgtttatgtggctctggcaatcaaacccaggtccccacaccaactttaaggat 320
Query: 121 cttgctggctgtgcattctttcagcactgcatgtagatatccttaaagtgcattgaaaag 180
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 321 cttgctggctgtgcattctttcagaactgcatgtagatatccttaaagtgcattgaaaag 380
Query: 181 tatttctcaaatatcaattatgggaaatggacagattgttcagtatttaagagttgcgtg 240
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||
Sbjct: 381 tatttctcaaatatcaattatgggaaatggacagattgctcagtatttaagagttgtgtg 440
Query: 241 ccactcttggagagaatctgagtttggttcctagaacctgcgatggagaactcacaacta 300
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 441 ccactcttggagagaatctgagtttggttcctagaacctgcaatggagaactcacaacta 500
Query: 301 cctataaatcctgctctaagggatctgataccttcaggtttctctacaaccactatattc 360
|||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cctataaatcctgctccaggggatctgataccttcaggtttctctacaaccactatattc 560
Query: 361 atgtgtgcccacatacacatactcacacatgcactcctaatagaaaatataaataaaagt 420
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 561 atgtgtgcccacatacacatactcacacatgcactcctaatagaaaacataaataaaagt 620
Query: 421 ttaaataataccaaattgtgtctttgttgtcgttgttgtttgttgttaagatatagtctt 480
||||||||||||||||| ||||||||||||| ||||||||||||||||| ||||||||||
Sbjct: 621 ttaaataataccaaattttgtctttgttgtcattgttgtttgttgttaacatatagtctt 680
Query: 481 gcaatactgttatggatgcctggtttcaaa-ctcacatgctgaaactatatgagtatctg 539
|||||||||||||||||||||||||| ||| ||| ||| |||||||||||||||||||||
Sbjct: 681 gcaatactgttatggatgcctggtttgaaaactcgcatactgaaactatatgagtatctg 740
Query: 540 gtattgcaccgcaatgcccaaatattttt 568
|||||||||||||||||||||||||||||
Sbjct: 741 gtattgcaccgcaatgcccaaatattttt 769
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 568
Length of database: 969
Length adjustment: 10
Effective length of query: 558
Effective length of database: 959
Effective search space: 535122
Effective search space used: 535122
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no087_i23.g1 MSMg01no087_i23.g1 CHROMAT_FILE:
MSMg01no087_i23.g1 PHD_FILE: MSMg01no087_i23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:39:44 2005
(441 letters)
>mm_chr11_111583520_111584360
Length = 841
Score = 774 bits (400), Expect = 0.0
Identities = 433/446 (97%), Gaps = 7/446 (1%)
Strand = Plus / Minus
Query: 1 agaagagaa-actgttcccttcctgacgcaattcaaagggtttgctggatcattacagta 59
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 535 agaagagaatactgttcccttcctgacgcaattcaaagggtttgctggatcattacagta 476
Query: 60 attttagaatctgtgaaaacccctctggccctcagaaggtgttgaatgcataggaaggga 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 475 attttagaatctgtgaaaacccctctggccctcagaaggtgttgaatgcataggaaggga 416
Query: 120 gcaatgaacttgaaaggtttcttcccatctggcaattcccccaatgaccaagccgaaaga 179
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 415 gcaatgaacttgaaa-gtttcttcccatctggcaattcccccaatgaccaagccgaaaga 357
Query: 180 gggctgcagagagggaaggctcaaacagtgttgtgagggcagcttcccactcatgttccg 239
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 356 gggctgcagagagggaaggctcaaacagtgttgtgagggcggcttcccactcatgttccg 297
Query: 240 gaaaccactgatacaaggggctcacagcagtggccacatggtcaggagactccacaaaca 299
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 296 gaaaccactgagacaaggggctcacagcagtggccacatggtcaggagactccacaaaca 237
Query: 300 tgtggcttcctctcttgttttctcacaatccccccc----tctctgtctctctgtctctg 355
|||||||||||||||||||||||||||||||||||| ||||| ||||||| |||||
Sbjct: 236 tgtggcttcctctcttgttttctcacaatccccccccccctctctctctctctctctctc 177
Query: 356 tctctgtctctctctctgtatgtgtgtgtgaggtaacaattaacagtgaagctataaaag 415
||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 176 tctctctctctctctc-gtatgtgtgtgtgaggtaacaattaacagtgaagctataaaag 118
Query: 416 aaaaaaattgaatgacttcttcaaag 441
||||||||||||||||||||||||||
Sbjct: 117 aaaaaaattgaatgacttcttcaaag 92
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 441
Length of database: 841
Length adjustment: 9
Effective length of query: 432
Effective length of database: 832
Effective search space: 359424
Effective search space used: 359424
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
