TATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCAGTTAGAAGATGTGTATTCTTAGCTTCTCATCTACCATAGAATGCC
TAAGACATTCAATGACCTTACAAAGTACATGCATCTTTTAATGTTCTCTC
CTTTTTATATTAATTAAAATAAAATAAAACAAGTACTGAATAAAAACAGA
GTTTTGGGACAGAAAGTAACAATAGAAATATGGATGAAGTTGTGTTCCAG
AAATAGCTGCTGGGTTGTAATGTGTGTGACTCTCTCTTTCATGTGCATCC
TTCCGTTTTTACTGCCAGACACACTCTGCTCTCTGACTTGTCTCCATGCA
TCCACACAAACCAAACTGGACAGTGCGTTGTGTCATCTTCATTGTATCAT
AGAGCACGCCTCTCCCTTTCATGTTTCCTATTGGAACTGATTTAAGGAGC
TTTGCCAGTGTGTCTTTTTCACTTCGATCTTTTAAGAGCTGGTTAACCTT
CAGAAAGATGATGTTCTGTTCTGCTATCTCTCTGTTGTCCTGTGAGGAAC
ACTTAGGCAGGCTGGTGTTTTTTGCTGTTCTATACGCTGTGCAGTCAGCA
CCCTTGACCCTCATATCCTTATCTGCACAAGCAAAGTTGTTTTCTAGGAA
CCGTGCTCACAGGATGAGTTCTGTAATATGGCGCTTGCAGGTGGGATAAT
N

CGATTGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXAATAAATATATATTAAGACAGTCT
CAAACCTAATGAAGCAACGTATTACCCCCAATAAACTATTAAAAAGACGC
TAAATTGTACAATGCATACAAGTACACATAATTGAATGAGATCAGTGCTA
GTACACATAAGGTAGAGGCTATTCCTATCACAAAAACGGTGAGAACTTGC
AATACCTTACTCTCACTAATACACAGATTATCCAAACTAAAAATATTCAC
AAAAACATTGAAGCTAAATGACAGTGAATGTCAATGTTCTTAACAGACAT
TTCCAGAATAGTTCTAGTATTCACCGCACAATACATATTCATTTTGACAT
TCCACAAAGTATCCTTACACTTTGAATATATACCAAGGCATGACACATAT
TCTTAATGCATATAGCAAAATCAACTGAGTTCTTTTATTCGATCTGACCA
AAAAGGAGTATAAAAAGAAATCATCATGAAGGAAAACCAGAGAAACGTCT
TAAATTTCTTGGTGACTAAACAAAACACCATTGAATACTGAAGGGTTCAC
TGAATAATTCACCAGAGTAATTTACAATACAAACATATAATTCACAAAAT
ACTGATGACTCCCCCTTATCCATCATATCACAAGAGATCTTGTCCCATAA
AGTGCCTGC

Query= MSMg01no088_h06.b1 MSMg01no088_h06.b1 CHROMAT_FILE:
MSMg01no088_h06.b1 PHD_FILE: MSMg01no088_h06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:40:56 2005
         (502 letters)



>mm_chr11_37696651_37697553
          Length = 903

 Score =  920 bits (476), Expect = 0.0
 Identities = 494/500 (98%), Gaps = 1/500 (0%)
 Strand = Plus / Minus

                                                                       
Query: 4   ggaattcagttagaagatgtgtattcttagcttctcatctaccatagaatgcctaagaca 63
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 835 ggaattcagttagaagatgtgtattcttagcttctcatctaccatagaatgcctaagaca 776

                                                                       
Query: 64  ttcaatgaccttacaaagtacatgcatcttttaatgttctctcctttttatattaattaa 123
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 775 ttcaatgaccttacaaagtacatgcatcttttaatgttctctcctttttatattaattaa 716

                                                                       
Query: 124 aataaaataaaacaagtactgaataaaaacagagttttgggacagaaagtaacaatagaa 183
           ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 715 aataaaataaaacaagtactgaataaaaacagatttttgggacagaaagtaacaatagaa 656

                                                                       
Query: 184 atatggatgaagttgtgttccagaaatagctgctgggttgtaatgtgtgtgactctctct 243
           ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 655 atatgtatgaagttgtgttccagaaatagctgctgggttgtaatgtgtgtgactctctct 596

                                                                       
Query: 244 ttcatgtgcatccttccgtttttactgccagacacactctgctctctgacttgtctccat 303
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 595 ttcatgtgcatccttccgtttttactgccagacacactctgctctctgacttgtctccat 536

                                                                       
Query: 304 gcatccacacaaaccaaactggacagtgcgttgtg-tcatcttcattgtatcatagagca 362
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 535 gcatccacacaaaccaaactggacagtgcgttgtgttcatcttcattgtatcatagagca 476

                                                                       
Query: 363 cgcctctccctttcatgtttcctattggaactgatttaaggagctttgccagtgtgtctt 422
            |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 475 tgcctctccctttcatgtttcctgttggaactgatttaaggagctttgccagtgtgtctt 416

                                                                       
Query: 423 tttcacttcgatcttttaagagctggttaaccttcagaaagatgatgttctgttctgcta 482
           |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 415 tttcacttcgatcttttaagagctggctaaccttcagaaagatgatgttctgttctgcta 356

                               
Query: 483 tctctctgttgtcctgtgag 502
           ||||||||||||||||||||
Sbjct: 355 tctctctgttgtcctgtgag 336


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 502
Length of database: 903
Length adjustment: 10
Effective length of query: 492
Effective length of database: 893
Effective search space:   439356
Effective search space used:   439356
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)