Query= MSMg01no090_b08.b1 MSMg01no090_b08.b1 CHROMAT_FILE:
MSMg01no090_b08.b1 PHD_FILE: MSMg01no090_b08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:43:07 2005
(517 letters)
>mm_chr11_36774339_36775255
Length = 917
Score = 940 bits (486), Expect = 0.0
Identities = 507/514 (98%), Gaps = 2/514 (0%)
Strand = Plus / Minus
Query: 5 gaattcctgtatgcatacttacttacctggtcccttaagacttctccacttgtttcttac 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 717 gaattcctgtatgcatacttacttacctggtcccttaagacttctccacttgtttcttac 658
Query: 65 atacagtaacttagacccatccttctcttgtctctctctataaatccattgtttagttga 124
||||||||||||||| |||||||||| ||| |||||||||||||||||||||||||||||
Sbjct: 657 atacagtaacttagaaccatccttcttttgcctctctctataaatccattgtttagttga 598
Query: 125 ctgaagaaaagactcctgctgaccaatctgcttttctgagcaggtagtaagttcatgata 184
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 597 ctgaagaaaagactcctgctgaccaatctgcttttctgagcaggtagtaagttcatgatg 538
Query: 185 atcatctactgttctttgtatagttttcccttgacatttgagggtgcctctctgtgatga 244
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 537 atcatctactgttctttgtatagttttcccttgacatttg-gggtgcctctctgtgatga 479
Query: 245 actgaatatgtgtgcctgatttgaccaaaattatgagatgctggcagaacaggtcaaatt 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 478 actgaatatgtgtgcctgatttgaccaaaattatgagatgctggcagaacaggtcaaatt 419
Query: 305 caaaatttttagcaacagtggaattgttccactcagcaagagttaaatataagtgcagtt 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 418 caaaatttttagcaacagtggaattgttccactcagcaagagttaaatataagtgcagtt 359
Query: 365 actgacatctgtattgccaagctaagagatcactggaatcccaacacttccaagccaggg 424
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 358 actaacatctgtattgccaagctaagagatcactggaatcccaacacttccaagccaggg 299
Query: 425 aacgcgagcaacctaacatgtattagttcttgtgttcttgtgcctcaagaatctatcaat 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 298 aacgcgagcaacctaacatgtattagttcttgtgttcttgtgcctcaagaatctatcaat 239
Query: 485 aatcactaaggggcag-tttttttttctcattgc 517
|||||||||||||||| |||||||||||||||||
Sbjct: 238 aatcactaaggggcagttttttttttctcattgc 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 517
Length of database: 917
Length adjustment: 10
Effective length of query: 507
Effective length of database: 907
Effective search space: 459849
Effective search space used: 459849
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no090_b08.g1 MSMg01no090_b08.g1 CHROMAT_FILE:
MSMg01no090_b08.g1 PHD_FILE: MSMg01no090_b08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:43:07 2005
(477 letters)
>mm_chr11_36661730_36662606
Length = 877
Score = 862 bits (446), Expect = 0.0
Identities = 469/477 (98%)
Strand = Plus / Plus
Query: 1 agaattcgaagttacccttggctttgcagcaaggtggagggtggtctgagctatagaagc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agaattcgaagttacccttggctttgcagcaaggtggagggtggtctgagctatagaagc 260
Query: 61 cctgcctcaaacaaagaaacaaagaaataaaactcttctagttatttaccaccctgcctt 120
|| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 261 cccgcctcaaacaaagaaacaaagaagtaaaactcttctagttatttaccaccctgcctt 320
Query: 121 gcctccctcaaattcatattagggaaaataatactgatacccagatatgtattcagatgc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gcctccctcaaattcatattagggaaaataatactgatacccagatatgtattcagatgc 380
Query: 181 cccctgcaaatagctaggtcctgggagaactatatgaatgtacatattctctactctttt 240
|||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||
Sbjct: 381 cccctgcaaatagctaggtcctaggagaactatatgaacgtacatattctctactctttt 440
Query: 241 tgtcatttaaacacctctgcttctcccacttagatgttacacagttacagtgcttggagc 300
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgtcatttaaacacctctgcttctcccacttagatgttacacagttacagtgcttggagt 500
Query: 301 gatcatacttattagattttcgtcataggaacaaattggaaactgaaaggaggtcacagg 360
||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 501 gattatacttattagattttcgttataggaacaaattggaaactgaaaggaggtcacagg 560
Query: 361 ctcaggtaacccagtttatctaggggagacagtgataatgaaatctttgatgtttttaaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ctcaggtaacccagtttatctaggggagacagtgataatgaaatctttgatgtttttaaa 620
Query: 421 gcactgaagctcacttaatggattccagagaanatgatcctgagtcatgttttggag 477
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 621 gcactgaagctcacttaatggattccagagaaaatgatcctgagtcatgttttggag 677
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 477
Length of database: 877
Length adjustment: 10
Effective length of query: 467
Effective length of database: 867
Effective search space: 404889
Effective search space used: 404889
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
