Query= MSMg01no095_f05.b1 MSMg01no095_f05.b1 CHROMAT_FILE:
MSMg01no095_f05.b1 PHD_FILE: MSMg01no095_f05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:51:18 2005
(498 letters)
>mm_chr11_99054463_99055360
Length = 898
Score = 766 bits (396), Expect = 0.0
Identities = 414/420 (98%)
Strand = Plus / Minus
Query: 5 gaattccattgattagcgttaaatatttgaatttttgaaatcttagtataatagcataga 64
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 gaattccattgattagtgttaaatatttgaatttttgaaatcttagtataatagcataga 361
Query: 65 ataacttgtatttatatacctgaaatcactttcttacattctcataatctatttagactc 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 ataacttgtatttatatacctgaaatcactttcttacattctcataatctatttagactc 301
Query: 125 tatatccttaggtgtttataatttaaattatttctaggctgttgtaagttatataataaa 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 tatatccttaggtgtttataatttaaattatttctaggctgttgtaagttatataataaa 241
Query: 185 ccttgaatttttttatccaattatttatcactaggctgaagtggaaacgtaagggttctt 244
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 240 ccttgaatttttttatccaattatttatcactaggctgaagtggaaacttaagggttctt 181
Query: 245 tagagagtcagttatgttggctggtgttttgctagggcaaacacatgaaagagtgttttc 304
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 180 tagagagtcagttatgttggctggtgttttgctagggcaaacacatgaaagagtattttc 121
Query: 305 ctgaagaagacacaggtgaaaagctaacacagactcatgaaggaacgtttcactgaagga 364
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 120 ctgaagaagacacaggtgaaaagctaagacagactcatgaaggaacgtttcactgaagga 61
Query: 365 gacacaggacagaggatgttttgctaaagcaagcacgtgaaagacatgtgatgaaggatt 424
||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 60 gacacaggagagaggatgttttgctaaagcaagcacgtgaaagacatgtgatgaaagatt 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 498
Length of database: 898
Length adjustment: 10
Effective length of query: 488
Effective length of database: 888
Effective search space: 433344
Effective search space used: 433344
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no095_f05.g1 MSMg01no095_f05.g1 CHROMAT_FILE:
MSMg01no095_f05.g1 PHD_FILE: MSMg01no095_f05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:51:18 2005
(473 letters)
>mm_chr11_98912993_98913865
Length = 873
Score = 872 bits (451), Expect = 0.0
Identities = 469/475 (98%), Gaps = 3/475 (0%)
Strand = Plus / Plus
Query: 1 attcattcattcattcatccacctgaaaacacgtattgaaaac-tactatgtgccagctt 59
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 200 attcattcattcattcatccacctgaaaacacgtattgaaaacatactatgtgccagctt 259
Query: 60 tagttttcagc-cctgggaagcctcgttgtgatttcctccgattgtagaatgtgacgagg 118
||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 tagttttcagcgcc-gggaagcctcgttgtgatttcctccgattgtagaatgtgacgagg 318
Query: 119 tgttctcaactcaaggcccacgggagaagagaaacctcattcttggagtgagagagaaag 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 tgttctcaactcaaggcccacgggagaagagaaacctcattcttggagtgagagagaaag 378
Query: 179 aaagtggtgaacattgaacgccctccctctccatcttggccagagcgtgggaaggtgtag 238
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 379 aaagtggtgaacattgaacgccctccctctccatcttggccagagcgtaggaaggtgtag 438
Query: 239 agtagaggctcacggctcctgagacccacctctgctctgtgctgctgcgtagagctctct 298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 agtagaggctcacggctcctgagacccacctctgctctgtgctgctgcgtagagctctct 498
Query: 299 ccttgccgcctccagggcacaagcttgagggacagggcccatctttggtcagggtattcg 358
||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 ccttggggcctccagggcacaagcttgagggacagggcccatctttggtcagggtattcg 558
Query: 359 gtcatccgacaatgccttgcaggtagatctctgctgtgggaaaggaatggggtgaggaag 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 gtcatccgacaatgccttgcaggtagatctctgctgtgggaaaggaatggggtgaggaag 618
Query: 419 gccggaaggacagggggcagggaggtgggctcatcactctgagcctgcaggagag 473
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 gccggaaggacagggggcagggaggtgggctcatcactctgagcctgcaggagag 673
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 473
Length of database: 873
Length adjustment: 10
Effective length of query: 463
Effective length of database: 863
Effective search space: 399569
Effective search space used: 399569
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
